Labrus mixtus (cuckoo wrasse): 132972926
Help
Entry
132972926 CDS
T10666
Symbol
tdg.2
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132972926 (tdg.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmix03400
]
132972926 (tdg.2)
Enzymes [BR:
lmix01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
132972926 (tdg.2)
DNA repair and recombination proteins [BR:
lmix03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
132972926 (tdg.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AT_hook
GAGA_bind
TFIIA
Motif
Other DBs
NCBI-GeneID:
132972926
NCBI-ProteinID:
XP_060892056
LinkDB
All DBs
Position
4:complement(16418586..16427717)
Genome browser
AA seq
435 aa
AA seq
DB search
MIVYLNKSTVEMEENQYTSLTAPTDYFQQWYQSSQQHPEAQYGMPYHNMGYYTEGPNDEL
VMAELSVHREPQIISHQEPVYQNCHPPASNHYQESAYQQNVRDQQHQQQQQYPSQQHPAQ
LQHPQHQQTAQQQAPNVQHQPQPAAPSQVVTPVKKKRGRPPKHQSEDGKIKEEDDEVEAA
KKAKRALNRFNGMSVAEVMAKTLPDVITYNLDILIIGINPGLLSAYKGHHYPNPGNHFWK
CLFLSGFTDEQLNYMHDQNLPENYSIGFTNMVERTTPGSKDLSSKEIREGGKQLLEKLQK
YKPLIAAFNGKGIYEIFCKETFGVKAKNLEFGLQPYKIPETETVCYLMPSSSPRCAQFPR
AQDKVHFYIKLKELRDQMKGIAPSIEVKETQYSFDLQLAKEDAKRMAIKEEQVDPEYESC
GRLNNDSSQSSSSFN
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgtatttaaataagtcaacagttgagatggaagaaaaccagtacacttcattg
acggctcctacggattatttccagcagtggtaccagtccagccagcagcaccctgaggcc
cagtatgggatgccctatcacaacatgggctattacacagaaggtcccaacgacgagctc
gtcatggccgagctgtctgtccaccgagagccgcagattatctctcaccaggaacctgtt
tatcagaactgccaccccccggcctcaaatcactaccaggagtcagcctaccagcagaac
gtcagggaccagcagcaccagcagcagcagcagtatccttcacagcagcatcctgcacag
cttcaacaccctcagcatcaacaaacagcccaacagcaggcaccaaatgttcagcaccaa
cctcagcctgctgctccctctcaagttgtgacgcctgtgaaaaagaagagaggccggcct
ccgaagcaccagtcggaggacggaaaaatcaaggaggaggacgatgaggtcgaagccgcc
aaaaaagccaagagggccctcaaccgctttaacggcatgtctgtggctgaggttatggcc
aagacgctgccggacgtcattacctacaatctggacattctgataatcggaattaaccca
ggactattgtcagcctacaaaggacaccattacccaaacccaggaaaccatttctggaaa
tgtctgtttctctctggtttcactgacgagcagctgaactacatgcatgaccagaaccta
ccggagaactacagcatcggcttcaccaacatggtggagaggaccacacctggcagcaag
gacctctctagtaaggagattcgcgaaggaggaaaacaattactggaaaagctgcagaaa
tacaagccattgatagcagcatttaatggaaaaggtatttatgaaatcttctgcaaggaa
acattcggtgtgaaggcaaagaatcttgagtttggtctgcagccctacaaaatcccagaa
acggagacagtgtgctacttgatgccgtcttcgagtccccgttgtgcacagtttcctcgt
gcacaggataaagtccatttctacatcaagctgaaggagctgcgagaccaaatgaagggc
atcgctccgagcattgaggttaaagagacgcagtactcgttcgatctgcagctggctaaa
gaggatgccaagaggatggcaatcaaagaagagcaggtggatccagagtatgagagctgt
ggtcggctgaacaacgattcaagtcaaagcagcagctccttcaactag
DBGET
integrated database retrieval system
