Labrus mixtus (cuckoo wrasse): 132979588
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Entry
132979588 CDS
T10666
Symbol
dhx9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmix03041
]
132979588 (dhx9)
03012 Translation factors [BR:
lmix03012
]
132979588 (dhx9)
Enzymes [BR:
lmix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
132979588 (dhx9)
5.6.2.6 RNA 3'-5' helicase
132979588 (dhx9)
Spliceosome [BR:
lmix03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
132979588 (dhx9)
Translation factors [BR:
lmix03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
132979588 (dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
ResIII
nSTAND3
AAA_19
AAA_22
AAA_14
ATPase
Motif
Other DBs
NCBI-GeneID:
132979588
NCBI-ProteinID:
XP_060901479
LinkDB
All DBs
Position
8:complement(29893883..29917269)
Genome browser
AA seq
1278 aa
AA seq
DB search
MADIKNFLYAWCGKKKMTPSYDIRAAGNKNRQKFLCEVRVEGFNYIGMGNSTNKKDAQSN
AARDFVNYLVRIREMGAAEVPALGVSAPEADLPDGGAGGGGGGSEGGFGVLPSSGPLPPH
LVVKAEQEEGSSGGPVPGVTGLGYSGGGNSGWGGRGGGGGGGGGAQWDRGANLKEYYDKR
DEQEAQATLESEEVDLNANLHGNWTLENAKARLNQFFQKERTSAEYKYSQVGPDHNRSFI
AEMQLFVKQLGRRITGREHGSNKKLAAQSCALSLVRQLYHLGVVEAYSGVTKKKEGETLE
AYEVSVTPDLQQQLATVVKELGVQVPPPSADPSSSVSLIQGKMATFEPSQRQSGAGVVPW
SPPQVNWNPWTSSNIDEGPLAFCTPEQISGDLHDELMYQLEHDDNLQKILAEREQLPVKQ
FEKEIMDTIDNNPVVIIRGATGCGKTTQVPQYILDRFVKEGKASDCNIVVTQPRRISAVS
VAERVAYERGEDLGKSCGYSVRFESILPRPHASVLFCTVGVLLRKLEAGIRGISHVIVDE
IHERDINTDFLMVVLRDVIQAYPEVRIVLMSATIDTTMFREYFFNAPIIEVFGRTFPVQE
YFLEDCIQMTNFIPPPMDRKKKEKDEDGGEEDTNCNMICGPEYTAETKRSMAQINEKETS
FELVEALLKYIETLKVAGAVLIFLPGWNLICSMQRHLETNPHFGSNRYRILPLHSQIPRE
EQRRVFEPVPESITKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWA
SKTNLEQRKGRAGRVRPGFCFHLCSHARFERLETHMTPEIFRTPLHEVALSIKLLRLGAI
GHFLSKAIEPPPLDAVIEAEHTLKELDALDSNEELTPLGRILARLPIEPRLGKMMIMGCI
FHVGDAMCTISAATCFQEPFISEGKRLGFVHRNFSGSRFSDHVALLSVFQAWDDVRINGE
DAETRFCEHKRLNMSTLRMTWEAKVQLKEILVNAGFPEESLMTQMFNTVGPDNNLDVVVS
LLTFGSYPNVCYHKEKRKILTTEGRNALIHKSSVNCPFSSHDMTYPSPFFVFSEKIRTRA
ISAKGMTLVSPLQLLLFACKKISSNGDIVELDDWIKLRIPHEVAGGVAALRAGLEALVVE
VTKDPEFIRQMDQGNQRLLNLIRHVSKPSAAGLNMMSNNQRMGDGPRPPKMGRFDGGGGG
GGGGYRGGGGYRGGGGYGGGGGYRGGGGYGGGGGYRGGGGGGGYRGGYGGGGGYGGGGGY
RGGGGYRGGGGGGYRGGY
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggcggacatcaagaacttcctgtacgcctggtgtgggaaaaagaagatgactcccagt
tacgacatccgagccgcggggaacaaaaacaggcagaagtttttgtgtgaggtccgtgtc
gagggcttcaactacatcgggatgggaaactccaccaacaagaaggacgctcagtccaac
gctgcccgggactttgtcaactacctggtccggatcagggagatgggtgcagctgaggtc
cccgctttaggagtgagcgctcctgaagccgacctacctgacggaggagcaggaggagga
ggaggaggaagtgaaggtggctttggagtcctcccgtccagcggccctcttcctcctcac
ctcgtcgtcaaagctgagcaagaagaaggcagcagtggagggccggtaccaggagttacc
ggactgggttactcaggaggagggaactctgggtggggaggcagaggaggcggcggcggc
gggggaggaggagcacagtgggaccgaggagccaacctgaaggagtactacgacaagaga
gacgaacaggaggcgcaggccactctggagtccgaggaggtggacctgaacgctaatctc
cacggtaactggacgctggagaacgccaaggcccgcctgaaccagttcttccagaaggag
agaaccagcgctgagtataaatacagccaagtgggaccggaccacaacaggagcttcata
gcggagatgcaactgtttgtgaaacagcttgggagaaggatcacaggtcgagagcacggc
tccaacaagaagctggcggctcagtcgtgcgctctctctctggtccgacagctctaccat
ctgggggtggtcgaggcctactccggagtcaccaagaagaaggagggagaaaccctggag
gcgtacgaggtcagcgtgactccagacctgcagcagcagctggccactgtcgtcaaggag
ctcggagtccaggtccccccaccttctgcagaccccagcagctcggtgtccctgattcag
gggaagatggcgacgttcgagccatctcagcgtcagagcggagccggagtcgtcccctgg
tcgcctccacaggtcaactggaacccctggaccagcagcaacatcgacgagggaccgctg
gccttttgcactccggagcagatcagtggcgacctgcacgacgagctgatgtaccagctg
gagcacgacgacaacctgcagaagatcctggcggagcgagagcagcttcccgtcaaacag
tttgagaaagagatcatggacaccatcgacaacaaccccgtggtgatcatcaggggagcg
acgggctgcggcaaaaccactcaggttcctcagtacatcctggaccgcttcgtcaaagaa
ggcaaagcatccgactgtaacatcgtcgtcacccagcccagaaggatcagcgctgtgtcg
gtggcagaacgagtcgcctatgagagaggagaggatcttgggaaaagctgcggctacagc
gtccgttttgagtccatcctccctcgcccccatgccagcgtgctgttctgcactgtcggt
gttctgctgcgaaagctggaagcaggaatccgaggcatcagtcacgtcattgttgatgag
atccatgagagagacatcaacacggactttctcatggtggtcctcagagacgtgatccag
gcgtacccagaggtccgtatcgtcctcatgtccgccaccatcgacaccaccatgttcaga
gaatacttcttcaacgcccccatcatcgaggtgttcggacgcacatttcccgttcaagag
tacttcctggaggattgcatccagatgaccaacttcatccctcctccgatggaccgcaag
aaaaaggagaaagacgaggacggaggagaggaggatacaaactgtaacatgatctgtggg
ccggagtacacggcggagacgaagcgttcgatggctcagattaacgagaaggagacgtcc
tttgagctggtggaggctctcctcaagtacatcgagacgctgaaggtggccggagccgtg
ctcatcttcctgcccggctggaacctcatctgctccatgcagagacacctggagaccaac
ccgcacttcggaagtaaccggtaccgcatcctgccgctccactctcagatcccccgcgag
gagcagaggagggtttttgaaccagttcctgaaagcatcacgaaggtgattctgtccact
aacatcgcagagacgagcatcaccatcaacgacgtcgtctacgtcatcgactcctgcaag
cagaaagtgaagctgttcacctcgcacaacaacatgaccaactacgccaccgtctgggcc
tccaagaccaacctggagcagaggaaaggtcgagccggcagagtgcgacccgggttctgt
ttccacctctgcagccacgcccgcttcgagaggctggagactcacatgaccccagagatc
ttcaggactccgctgcatgaagtcgccctgagcatcaagctgctgagactcggcgccatc
ggacacttcctgtccaaggccatcgagccgccgccgctggacgccgtcatcgaggccgaa
cacaccctgaaagagctggatgcgctggactctaacgaggagctgacccctctgggccgg
attttggcccgcctgcccatcgagcctcgtctggggaagatgatgatcatgggctgcatc
ttccatgttggagacgcgatgtgcaccatctccgccgccacctgtttccaggagccgttc
atcagcgaggggaaacgtctcggctttgtccacagaaacttttcaggtagccggttctcc
gaccacgtggctctgctgtccgtgttccaagcctgggacgatgtcaggattaacggcgag
gacgcagaaacgcgtttctgtgagcacaaacgtctcaacatgtcgactctgaggatgacc
tgggaggccaaagtgcagctgaaggagatcctggtgaacgctggattccctgaagagagt
ctcatgactcagatgttcaacacggtcggaccagacaacaacctggacgtggtggtgtcc
ctgctgaccttcggctcctaccccaacgtctgctaccacaaagagaagaggaagatcctg
accaccgaggggcgcaacgccctcatccacaagtcctccgtcaactgtccgttcagcagc
cacgacatgacctacccatccccgttcttcgtcttcagcgagaagatccggacccgggcg
atctcggctaaagggatgactctggtcagtccgctgcagctgctgctgttcgcctgcaag
aagatcagctccaacggagacatcgtggagctcgacgactggatcaagctgaggatccct
cacgaggtggcgggtggcgtggcggctctgcgggccggtctggaggctctggtggtcgag
gtgaccaaagatcctgaattcatccgacagatggaccagggcaaccagagactcctgaac
ctgatcagacacgtgtccaaaccgtctgcagccggactcaacatgatgagcaacaaccag
aggatgggagacggacctcgacctccaaagatgggacgctttgacggaggaggaggggga
ggaggaggagggtacagaggagggggaggttacaggggagggggaggatatggaggtgga
ggagggtataggggagggggaggatatggaggtggaggagggtataggggagggggagga
gggggaggttacagaggaggttatggaggaggaggaggatacggagggggaggagggtac
agagggggaggaggatacagagggggaggagggggagggtacagaggaggttattaa
DBGET
integrated database retrieval system
