Labrus mixtus (cuckoo wrasse): 132980704
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Entry
132980704 CDS
T10666
Symbol
tiam1b
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04530
Tight junction
lmix04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
132980704 (tiam1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
132980704 (tiam1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lmix04990
]
132980704 (tiam1b)
Domain-containing proteins not elsewhere classified [BR:
lmix04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
132980704 (tiam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
132980704
NCBI-ProteinID:
XP_060902965
LinkDB
All DBs
Position
9:complement(23402480..23444956)
Genome browser
AA seq
1589 aa
AA seq
DB search
MGNAESQNGDHNLYGNEHGYLSRKHMSRSLRISNKQSRRTRHASSGKIEHRNSETSTRSS
STPSIPQSLADNGLEPFNETNILPDFGSPIWVDRVAMNLRPVSFHNDLANPSVHMKTMHV
TLPSPTADEVQDEDLYTGEVTYLQKTQEGLKESASFKKKRSKSADMWRDDSLEFSLSDLS
QEHLTSTEEIIDMANERDFTDCEGHLHSSPTDSADRANSLDELYSQKNPARQKAQRRYAK
WHDGNRAVREGEDDKMLSPSEEDGNTYSAYTLPCRRSHCLSEGLSSHQAAICASMQGRRA
QTIQDVTAGEGSEYEDSGIDGVTAEAEHQSRRYKTMSASFSVCSAAGRSMFAGSDSGSSS
GGGGAAECVQGVYENFRQELEMSSCQTESLEEAGSALSDEQSTMSSAYQSDPLLSVAQGM
VRKAGRLAVKNFLVHKKNKKVESATRRKWKSYWVSLKGCTLFFYETDGRSGIDNNSIPKH
AIWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTCSQTELENWITAVHSACATAVARQ
HHREDTVRLLRAEIKKLEQKIDMDEKMKKMGDMQLSAVTDTKKRKTILDQIFLWEQNLEQ
FHMDLFRFRCYLASLQGGELPNPKRLLAFASRPTKLAMGRLGIFSVSSFHALVAARTETG
VRRRTQAMSRSCSKRKSRFSSLWGLDTTSKKKTKAHPSINQVFADGEEPVKKPLEGTFVD
HANEHTKSEGGTVKSFPRPSTESDLWVPDHLTPSWVCLPNDQPVLTIIQPGESALCVLET
ICKAHQLDPTKHYLRLKLLIENQVQFYIPKPEEDVCDLLYKEIELCSKITKVIQFDRDES
CMIGYGFSISVVEEDEVQQLYITDVKAGGLAFAKGLNAGDEILQLNGKDSHSLNFSDMKA
AFSQASLALTVNTLPSVERRQLCYLPPRRSDAQEDLYTDIFSQSQEEILDDGVGLLLESS
GDSLDEDSEIFSEFDECRKSTEQVAAFCRSLHDMNPSECVSSSPSPDSPFPPPATLRLLS
DADKLRKVICELVETERTYVKDLNCLIGRYLTPLQKETFLTQDELDVLFGNLPEMVEFQV
EFLKTLEDGTRLVPDLEKLERVDQFKKILFSLGGSFLYYADRFKIYSAFCASHTKVPKVL
VKAKTDADFKAFLDERNPKQQHSSTLESYLIKPIQRVLKYPLLLKELYSLTDPDSEEHYH
LDVAMKAMNKVASHINEMQKIHEEFGAVFDQLITEQSGDKKEVADLSMGDLLLHTTVSWI
NPPASLGKWKKEPQLATFVFKMAVVFVCKDGAKQKKKIGGYHRVSEASEEKDPFRYRHMI
PTDALQVRSLANADGEGSAVCEIVHTKSESEGRPERTFQLCCSSPESKKDFLKTVHSILR
EKHRRQLLKTESLPLNQQYVPFGGKRLCALKGARPAINRAASAPSRTLGRRKLVRNRFTI
DTDIVFDGEPEQDPASPQESDSNRLKQEDEPDQQQQQSEVAGDTDRWVEEQFDLEEYEDR
EEVKETDILSDEDDEFNKPPRMPSAEDDLEAPVMALSLEGEETESESLKSPTVGETPDDG
DDLEDQEQAEKDDIWVRREKSGSSSDCGT
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgccgagagccagaacggggaccataacctctacggaaatgaacatggctat
ttgtcacgtaagcacatgtctcgctctcttcgcatctccaacaagcagtccagacgcacg
agacatgcttcatcagggaaaatagagcacaggaactctgagacgagcacacgctcaagc
agcactccaagtatcccacaatccctagccgacaatggtctggagccgttcaatgagaca
aacatacttcctgactttggtagtcccatttgggtggaccgtgtagccatgaacctgcgc
cctgtgtccttccacaatgacctggccaatccgtctgttcacatgaaaacaatgcacgta
accctacctagccccactgcggacgaggtgcaggacgaagatttgtacaccggcgaggtg
acttacctccagaaaactcaggagggccttaaagagagtgcgagctttaagaagaagagg
tcgaaatctgcagacatgtggcgagatgacagcctagagttctctctgtcggacctcagc
caagagcatctgacgagcacggaggagatcatagacatggccaatgagagggactttacc
gactgcgaaggccacctgcattccagccccacagactcagctgacagggccaactcactc
gacgagctatacagccagaagaaccctgcccgacagaaagcccagcgccgctatgcgaag
tggcatgacggaaacagggcagtaagggagggagaggatgacaagatgctctctccatca
gaggaggacgggaacacctacagtgcatacacccttccctgccggcgctcacactgcctg
tctgaaggcctaagcagccaccaagctgccatttgtgccagtatgcagggcaggagggca
cagaccatacaggatgtcacagccggggagggcagcgagtatgaggacagtggcatcgac
ggggtgacagcggaggcagaacaccagtcccgaaggtacaagaccatgtcggcctccttc
tccgtgtgctccgccgccggcaggagcatgttcgccggcagcgacagcggcagcagcagc
ggcggcggcggggctgccgagtgtgtgcagggcgtgtacgaaaactttcgccaggaactg
gaaatgagctcctgccagacagaaagcttggaagaggcggggtcggccctgagtgatgag
caaagcactatgagctccgcctaccagtctgacccgttgctaagtgtcgcccaggggatg
gtgcgcaaagctggcaggcttgctgtcaagaacttcctcgtacataagaagaacaagaag
gtggagtcagccacgaggcgcaagtggaagagttattgggtttccctgaaaggctgcact
cttttcttctatgagactgatggtcgctcagggatcgacaacaacagtattccaaagcat
gccatctgggtcgagaacagtattgtccaggctgtgccggagcatcccaaaaaggacttt
gtgttctgcctcagcaactccctgggagacgcttttcttttccagacctgcagccagaca
gagctggagaactggatcaccgctgtccactctgcgtgtgccaccgccgtcgcccgccaa
caccaccgagaggacacggtccgcctgcttcgtgccgagatcaaaaagctggagcagaag
atagacatggacgagaagatgaagaagatgggagacatgcagctgtctgctgttactgac
accaagaagaggaagacgatcctggatcagatcttcttgtgggagcaaaacctggagcag
tttcacatggatctattccgcttcagatgctacctggccagtctgcagggaggagagctg
cccaaccccaaacgcctcctggcctttgcatctcgccccacaaagctggccatgggacgt
ctggggatattctccgtctcttccttccatgcattggtggcagctcgcacagagaccggc
gtgcgacggcggacgcaggccatgtcacgctcctgcagcaagcgcaagagcaggttctcc
tctctctggggtcttgacactacctcaaagaaaaaaacaaaagctcatcccagtatcaac
caggtctttgctgatggcgaagagccagtgaagaagcctttggaaggcacatttgttgat
catgccaatgaacacacgaaaagtgaaggtggaactgtgaaaagctttccacggccaagc
acggagagtgacctgtgggtccctgaccacctcactccttcctgggtgtgtctgccgaat
gaccagccggtgctaacgatcatccagcccggggagtcggcactgtgtgttctggaaacc
atttgcaaggctcatcaactggatcctactaagcactacctgcggcttaaactccttatt
gaaaaccaagtgcaattctacattcccaaaccagaagaagatgtgtgtgacttgctttac
aaagaaattgagctctgctccaaaataactaaagtcatccagttcgaccgagatgaatcc
tgcatgattggttacggtttctccatttcagtggtggaggaggatgaagtacagcagctc
tacatcactgatgtgaaggcaggcggattagccttcgccaaaggtctaaatgctggggat
gaaatacttcagctaaacggaaaagactctcatagtctcaacttctccgacatgaaggca
gcgttttctcaagcctcgcttgcattgacagtcaacacccttccgtctgtggaacgccgt
cagctctgctacctgccaccacgccgctcagacgcacaggaagatctctacacagacatt
ttctcacaaagtcaagaggagattcttgatgacggtgtgggactgttgcttgagagctca
ggagacagcctggatgaagactctgagatcttcagtgagtttgatgagtgcagaaagagt
acagagcaagtcgctgctttctgtcgcagtctccatgacatgaatccctcggagtgtgtg
tcctcttcgcctagcccggactcgcccttcccacctcctgcaactctgcgactgctctcg
gatgccgacaagctccgcaaagtcatttgtgagctggtggagaccgaacgcacctatgtc
aaagatctcaattgcctcattgggagatatctaaccccactgcagaaagagaccttcctc
actcaggatgagctggatgttctgtttgggaacttgccagaaatggtggagttccaggtt
gaatttcttaaaaccctggaagatgggacgcgactggttccagacctagagaagctggag
cgagtggatcagtttaagaaaatcctgttctctctgggaggctctttcctgtactatgcg
gaccgttttaaaatctacagtgctttctgcgcgagccacaccaaagtccctaaggtcctc
gtaaaggccaaaaccgatgctgatttcaaagccttcctggatgagcgaaaccccaagcag
cagcactcctccaccctggagtcatacctgatcaaaccaattcagagggtgcttaagtat
cccctgctgctgaaggagctgtactcactcaccgacccagacagcgaggagcattaccac
cttgatgttgccatgaaagccatgaacaaagttgccagccacatcaatgagatgcagaag
atccacgaggagtttggagccgtgtttgatcagctcatcaccgagcagagcggggacaag
aaagaggttgctgatttgtccatgggtgacctgcttctccacaccactgtgagctggatc
aaccccccagcctctctgggaaaatggaagaaagagccccagttggctacatttgtgttc
aaaatggcagtggtcttcgtttgcaaagatggagccaagcagaaaaagaaaattggtggc
taccatcgcgtgtctgaagcttctgaagaaaaagaccccttcagataccgtcacatgatc
ccaactgatgcccttcaagtcagatccttggcgaatgcagatggcgagggctctgctgtg
tgtgagatcgtccacacaaagtcagagtcagaggggaggccagagaggacgtttcagctg
tgctgtagctctccagagagtaaaaaagactttctgaagacagtccattccatcttgaga
gaaaagcaccgccggcagctccttaaaacagagagtttaccccttaaccagcagtatgtg
ccctttggaggaaagcgcctctgtgccctgaagggagcccgtcctgccataaatagagca
gcatctgccccttccaggacactcggcagaaggaagttggtgcgcaaccgcttcaccata
gacacagacattgtttttgatggtgagcccgaacaggacccggcttcaccgcaagagtct
gattcaaacagactaaagcaggaggatgaacccgatcagcagcagcagcagtccgaggtg
gcaggtgacacagatcgctgggtggaggaacagtttgacctagaggaatacgaggaccgg
gaagaggtgaaggagactgacatccttagtgatgaggacgacgagttcaacaagcctccc
agaatgccatccgctgaggatgacctggaggctcctgtcatggctttatccttggagggt
gaggaaaccgagagtgagagccttaaatccccaacagttggtgaaacacctgatgatggt
gatgacctggaggatcaagagcaagcagagaaagatgacatttgggtacgaagggagaaa
tcaggttcttcctctgactgtggcacataa
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integrated database retrieval system
