Labrus mixtus (cuckoo wrasse): 132981919
Help
Entry
132981919 CDS
T10666
Symbol
kdm2ab
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
132981919 (kdm2ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmix03000
]
132981919 (kdm2ab)
04121 Ubiquitin system [BR:
lmix04121
]
132981919 (kdm2ab)
03036 Chromosome and associated proteins [BR:
lmix03036
]
132981919 (kdm2ab)
Enzymes [BR:
lmix01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
132981919 (kdm2ab)
Transcription factors [BR:
lmix03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
132981919 (kdm2ab)
Ubiquitin system [BR:
lmix04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
132981919 (kdm2ab)
Chromosome and associated proteins [BR:
lmix03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
132981919 (kdm2ab)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
132981919 (kdm2ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
JmjC
F-box
Cupin_8
LRR_8
Cupin_1
LRR_4
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
132981919
NCBI-ProteinID:
XP_060904035
LinkDB
All DBs
Position
10:complement(9820476..9833887)
Genome browser
AA seq
1307 aa
AA seq
DB search
MEDPHTRYSKRLRTGTRRRYQDDGISDDEIEGKRMFDLDEKLQCVRFNSELIKHMEGKDF
TFEYIQREGLRDPIVFETADGLGIQMPDPEFSVSDVKLFVGSRRIVDVMDVNTQKGIEMS
MAQWRRYYETPPSEREKLYNVISLEFSHTRLENLVKRPASVDLIDWVDNMWPRHLKERQR
DSTNAIIDMHYPKVQKYCLMSVQGCFTDFHIDFGGTSVWYHILRGGKVFWLIPPSPQNLE
MYENWVLSGKQGDIFLGDKCHDCQRIELKQGNTFIIPSGWIHAVYTPEDTLVFGGNFLHS
FNIPMQLNIYSIEDRTRVPAKFRYPFYYEMCWYVLERYLYCLTNISHLTPEFQKYSLGIG
LTQADLETMDHTGNGAPNGVDSDTEHVEIKVKEEDDHKEKAAQFPKPKQMLTPFELEGLF
NLLGKLEELPAHKKCVPAGIRNAVALLEDMRAVLQNHVNENPKLSYTGEPIVKWPERPSW
YQPPTPPPPVIYRPRLGPTLHKPLGQRPTKRSSISALRRRRVRCKRCAGCCRKECGTCQY
CHDMRKFGGPGRMKKGCVMRQCLTPALPNTARCAICGEGESEESDPSTHSLMECSVCSQI
THHHCMKEPGEGKINKDLPSCWECPKCYQNKGSESESFSDEESGESEGFTSLPPSKLAYR
EGIGVGEGVRRGRRSRPTRPTAPPPSQKLLLQHQQNRKRASALELRLKKRIKLERSKLLS
RQAALDRSPRLLGSRLLSRLRSPTSRESQGRGRGTTWPSGSSLNSSPRGTAPIQQQPSSF
GLVLEPKGEPRRGRGRGVRLRGGGAGRGMRSGRSYGELQEESEDSSSSSTNSNSNSSSSS
SSDDDEDRGQTSVKGLDKENQPQSRREGRAAKEKEVEGSKVAYQNVAEEDEEEEMKQDSQ
TGGNDGSNLKVTLQRPTKAKQDPSAIVPKLEAVAPQTTTSAIHNQTRALARPPIRNRRPC
PEQHSNRHTPPLTRSGHTDTHSSHPERLDTSKRTKLSRPAKLSNGASCSSSSELPHHRVP
LSALQEGGGEADRESSGSGPGCEREVWVSVFRYLSRADLCVCMAVCKNWYKWCLDKRLWS
RIDLSIKRTITPQALTGIIKRQPITLDLSWTNISKKQLNWLVGRLPGLKDLMLAGCSWSS
ISALCSSGCPLLRSLDLRYADGIKDTQIRDLVSPPGCDNRSQLRTMQCLRLAGLDISDST
VRLVIRHMPQLTKLDLSHCNSLTDHSINLLTAVGSSTRNTLTELNLGGCSKLTDTCLKYL
RRLSCISLLDLRGCKGVSRMACEAFISELSVNTLYCLSDEKLIQRIS
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcctcacacacggtacagcaaacgcctgcgtacaggcacgcggcggcgctat
caggatgatggaatctcagatgatgaaattgaggggaaacgaatgttcgacctggatgaa
aagttacagtgcgtcagattcaactctgaattgatcaaacacatggagggtaaagatttc
acatttgaatacatccagagagaagggctcagggaccccattgtctttgagacagctgat
ggccttggaatacaaatgccggaccctgagttcagtgtgagtgacgtcaagctgtttgtt
ggtagtcgacgcattgtagacgtgatggacgtgaacacccagaaaggaattgagatgtcg
atggctcagtggcgacgctactatgagacgccaccgtcagaaagagaaaaactctacaat
gttatcagcctggagttcagccacaccagactggagaatctggtcaaacgaccagcttcg
gtggatctcattgattgggtggacaacatgtggcctcgccatctcaaggaacgacagaga
gactccactaatgccatcatagacatgcattatcccaaagtacagaagtactgtctcatg
agtgtgcagggctgcttcactgatttccacattgactttggaggcacctcggtctggtac
cacatcttgcgaggaggaaaggtgttctggctgataccaccttcaccacagaacctggag
atgtatgagaactgggttttatcaggaaaacagggagacatcttcttgggggacaagtgt
catgactgccagaggatagaactgaagcagggcaataccttcatcatcccatcagggtgg
atccatgctgtgtacaccccagaggacacattggtgtttgggggaaatttcctccacagc
tttaacatccccatgcagcttaacatatacagtattgaggatcgcacacgggtgccagca
aagtttcgctacccgttctattatgagatgtgctggtatgtgctggagagatatctttac
tgtctgaccaatatctcccatctcacccctgagttccaaaaatactccctaggcataggg
ctgacccaggctgaccttgaaaccatggatcacactgggaatggcgccccaaatggggta
gacagtgacactgaacatgttgagataaaggtgaaggaagaggatgaccacaaagaaaag
gcagctcaatttcccaaaccgaagcagatgctgactccctttgagcttgagggcctgttt
aaccttttagggaagctggaggaacttcctgcccacaaaaaatgtgtccctgcaggcatc
aggaacgctgtagccctgcttgaggacatgagggctgttctgcagaatcatgttaatgag
aaccctaagctctcctacactggagagcccattgtcaagtggccagaaaggccgtcatgg
taccagccccccactccccctccccccgtcatttaccggccccgcttgggccccaccctc
cacaagcctctgggacagaggcccaccaaacgctcctccatctctgccttgaggcgcaga
cgggtgaggtgtaagcgctgtgctggctgttgcaggaaggagtgtggcacctgccagtac
tgccatgacatgaggaagtttggtgggcctggacgcatgaagaagggctgtgtcatgaga
cagtgtctaacgcccgccttgccaaacacagcacgctgtgccatatgtggagaaggagaa
tcagaggaatcagatccaagcactcactcactcatggagtgctctgtctgctcacagatt
acccatcatcattgcatgaaggaacctggtgaggggaagatcaataaggatttgcccagc
tgctgggaatgtcccaaatgttaccaaaacaaaggctcagaatcagagtcttttagcgat
gaagaaagtggagagtcggagggcttcacctccttgccgccatccaaacttgcataccgg
gagggaataggtgtaggagaaggtgtgagacgagggagacgtagtagacctaccagaccc
acagcaccacctccttctcagaaactgctactacagcatcaacagaatcgcaagagagca
agtgcactggagctcagacttaagaaaaggataaaactggagcggagcaaactgttatcg
agacaggcagctttagatcgttctcctaggctgcttggctccaggctgctgtccagacta
cgttctccaaccagcagagaatctcagggcagaggccggggcaccacctggcccagtggc
tcttccttaaacagctctccaagagggactgcgcccatccagcagcagccgtcttccttc
ggtctggttcttgaacccaaaggagagcctcgcagaggaagaggaagaggggtgaggctg
cggggaggaggagcagggagaggaatgagaagtggtagaagctatggagagctgcaggag
gagagtgaggacagcagtagcagcagcaccaacagcaacagcaacagcagcagcagcagc
agcagcgacgacgatgaggacaggggacagacaagtgtgaagggtttggataaagagaac
cagccacagtcaaggcgagagggacgagcagccaaagaaaaggaggtggaagggagcaag
gtggcttaccaaaatgttgcggaggaagatgaggaggaggagatgaaacaggacagtcaa
acgggggggaacgatggctccaatctaaaagtgacacttcagagaccaaccaaggccaag
caggatccatcagctattgtccctaaattagaagctgttgcccctcaaactaccacttca
gcaatacacaaccagaccagggcccttgcgagacccccaatcaggaatcgcaggccctgt
cctgaacaacactccaacaggcacacacccccactcactcgcagtgggcacacagacact
catagctcccacccagagaggctggacacctctaaaagaaccaagctgagcagaccggct
aaactgagcaatggcgcctcctgttcctcttcctctgagcttcctcatcaccgcgtccct
ctgtccgcactacaggaaggagggggcgaggcagacagggagagcagtgggagcgggcca
ggctgtgagagggaggtgtgggtatctgtcttccgttacttaagtcgagcagacctctgt
gtctgcatggctgtctgcaaaaactggtacaaatggtgtttagacaagcggctttggtca
cggatcgacctgagcatcaaacgcaccatcactcctcaggccctaacaggcatcataaag
agacagccaatcacactcgatctctcttggaccaatatctctaaaaagcagctaaactgg
cttgttggccggctgcctgggctgaaggatctgatgctggcaggttgttcctggtcatct
atttcagctctctgttcctctggttgccctctcctccgctctctggatctgcggtacgca
gacgggatcaaagacactcagatcagggatctagtcagccctccaggctgtgacaatcgc
agtcagttgcggaccatgcagtgtttgcgactagcgggcctggacatcagcgactccact
gtgcgcctggtgatccgccacatgccccaattaacaaaactagacctctcccactgcaac
agccttacagaccactccatcaacctgctgactgcagtgggctcatccactcgcaatact
ctcacagaactcaacctgggagggtgtagtaaactgacagacacctgtctaaagtatctc
cgacgtctctcttgcatctctctgctcgacctgcgaggctgcaaaggcgtctcacgcatg
gcctgcgaggccttcatctccgagctgtccgtcaacacgctctactgcctgtcagatgaa
aaactgattcagaggatatcctaa
DBGET
integrated database retrieval system
