Labrus mixtus (cuckoo wrasse): 132987951
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Entry
132987951 CDS
T10666
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1-like isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04530
Tight junction
lmix04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
132987951
09142 Cell motility
04810 Regulation of actin cytoskeleton
132987951
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lmix04990
]
132987951
Domain-containing proteins not elsewhere classified [BR:
lmix04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
132987951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_6
PDZ_2
RNA_pol_Rpc82
TUG-UBL1
Motif
Other DBs
NCBI-GeneID:
132987951
NCBI-ProteinID:
XP_060910947
LinkDB
All DBs
Position
14:complement(9870727..9926257)
Genome browser
AA seq
1664 aa
AA seq
DB search
MGNVESQNGDSSFYGDVTGHLSRKHTSRSLRLSNKQQITRRSRHSSSVKQEHRNSEASTR
SSSTPSIPQSLAENGLEPFNATDEFGEFGINPHWTQRVAMTMRPESYQQDDDLLATPTPE
TSEADTVAQDGGEDSMGEGEGDVIGEERYLQRMTEGPREGGSFKKKRSKSADMWREDSLE
FSLSDLSQEHLTSTEEMIDGEEEEQFTRPRASAGSAERASSLDHLCSQQSPGLRGQRSRF
AKNRREAECDGDGEGEEGLMSPTEEDCGGYGAFTLPCRRSHCLSEGLAGLGIPSAPRPAF
QGRRAQTTQDISGVLGEGSEYGDSGIDGVATEIDGDGELVSRRCKAMSASFSVYSATESS
VFNGSDSGSSSAGGGDGRGGEGVRGGVYENFRKELENQAWTHHGRDCTEEAGSAVSDEQS
SGTLSSAYPSDTLIGCAQGIVRKAGALAVKNFLVHKKNKKVEPATKRKWKHYWVSLKGCT
LFLYEHDCRSGIDHNSIPKHALWVENSIVQAVPEHPKKDFVFCLSNSVGDAFLFQTSGQT
ELENWITAIHSACAAALARQHHREDTVRLLRTEIRKLEQKIDMDEKMKKMGDMQLSTVTD
GKKRKTILEQIFLWEQNLERFHMDLFRCRCYLASLQGGEPPNPKRLLGFASRPTKLAMGR
LGIFSVSSFHALVSARTESSLRKRNQAMPRTFSKRRSRFSSLWGLDTTSKRKTMGHPSIN
QVFIDGMEPVRKPLERMFEDSSSEKSKEKEDSVKSLPQQNTDSDIWVPDYLTPSWVCLPN
NQPVLAIVQPGETALDVLSAVCKTHKIDPSSHYLRLKVWMDNQTLFYVPKFEEEISDLLY
KEIEICHKATKVICFDKAESCTIGYGFSVAVIDEDGMQQLHITEVKEDGLASAKGLKAGD
EILLLNGKPASALQMEDMRAAFINQALTLSVSTLPQLDSRLLCTLPPRRSDGDLATDIFS
QSQEDILDEVSGLTVNSQDESLDEGHRLTQQSPGGHLEDKTITGMGQKSTEHATAFCRSL
HDMNSLDCPMSSSSSSSSSSLSPSPVSALPPTAATQTQRQLSHADKLRKVINELVETEKT
YVKDLRCLIECYLTPLQKESFLTQDELDVLFGNLGEMVEFQVEFLRTLEDGIRLVPDLER
LERVEQFKKVLFSLGGSFLYYADRFKIYSAFCASHTKVPKVLAKAKTDPDFKAFLAVRNP
RQQHSSTLESYLIKPIQRVLKYPLLLRELYSLTDPDSEEHYHLDVAMKAMNKVASHINEM
QKLHEEYGAVFDQLINEQTADKKEVADLSMGDLLLHSTVMWINPPASLVKSKKDPDLAAF
VFKTAVVFVYKDSSKHRKKIGASHRVSVSDDRDPFRFRHMIATDSLQVRTLANSEGTAVC
EIVHTRSESEGRPERTFQLCCSSPDSKKDFLKAVHSILRDKQRRQLLKTESLPPNQQYVP
FGGKRLFALKGARPGMNRAASAPSRTLARRKLVRNRFTIDTDLVFHGNNNSDSEPSSHST
PSQHARLQSSKPQGEDTDRWVEEQFDLACYEDQGEGIDVGQLKETDILSDDDEYCKSVRA
ASLEPLDLQGKMRGLNLNGGVETDRDVMHGRMREGEVNQIKNSNETGSVDSFTSCGVSLA
RCEPQTIKFAPLKQCAVDGATNKDHNEIWVRREDIANVCNSDVF
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacgtagagagtcagaatggggacagcagtttctacggtgatgtgacgggacat
ctctcgcgtaaacatacgtcccggtcacttcgtctctccaataaacagcaaatcacacga
cgctcacgacactcttcttcagtgaaacaagaacacagaaactctgaagcctcaactcgt
tcctccagcaccccgagcatcccgcagtccttagcagagaacggactggaacctttcaac
gccactgatgagtttggagagttcggcatcaacccccactggactcagcgcgtcgctatg
acaatgaggccagagtcctatcagcaggacgatgacctcttggccacacccacgcctgag
acctcggaggcagacaccgtggctcaggatggaggagaggactccatgggggaaggggag
ggggatgttattggagaagaaaggtaccttcagcggatgaccgagggtccacgggaggga
gggagttttaaaaagaagcggtccaagtctgcagacatgtggagggaggacagcctggag
ttctctctgtctgacctgagccaggagcatctgactagcacggaggaaatgatcgatggg
gaagaggaggagcagttcacacgccctagagcaagtgcaggttccgctgaaagggcatcg
tctcttgaccatctgtgcagccagcagagtcctggcctcagggggcagaggagccgcttt
gctaaaaaccggagggaggccgagtgcgatggagatggagaaggggaggagggcttgatg
tctccaactgaggaggactgcggcgggtatggagcattcacactcccttgcagacgctca
cactgcctgtctgaaggcttggcagggctgggcatcccgtctgcaccgcgccctgctttc
caaggacgccgtgcacaaactactcaggatatctctggtgttttgggcgagggaagtgag
tatggcgacagtggcatcgatggtgtcgccacggagatagatggagacggagagttggtg
tcaaggcgctgcaaggccatgtcggcttctttctctgtgtattcagctaccgaaagcagc
gtctttaacgggagcgacagcgggagcagcagcgcaggaggaggagatggacgaggcggt
gaaggagtcaggggaggagtctatgaaaatttccgaaaggagttagaaaatcaagcctgg
acacatcatggtcgggactgcacggaggaggctggctccgccgtgagtgacgagcagagt
agcggcacactgagcagcgcatatccgtcagacactctgattggctgtgctcagggaatc
gtgaggaaagcaggggctctggcggtgaagaacttcttggttcataagaagaacaagaaa
gtggaacctgcaacaaagcgcaagtggaaacactactgggtctctctgaaaggctgcact
ctctttctgtacgagcatgactgccgttcagggatagaccacaacagtatccctaaacat
gcactgtgggtggagaatagcatagtccaggctgtccctgaacaccccaagaaagacttt
gttttctgcctcagcaactcagtgggagatgctttccttttccagacgtcaggccagacc
gaattggagaactggatcacagcgatccactctgcgtgtgccgcagccctggctcggcag
catcacagggaggacacggtgcggctgctgcgaaccgagatccgcaagctggagcagaag
atcgacatggacgagaagatgaagaagatgggagacatgcagctgtccaccgtcactgat
ggcaagaagaggaagaccatactggagcagatcttcctgtgggagcagaacttggagcgg
tttcacatggatctgttccgctgtcggtgctacctggccagtctgcagggcggcgaaccc
cctaatccaaaacgcttgctgggcttcgcttcccgtcccaccaagctggccatgggacga
ctgggcatcttctctgtgtcttccttccatgcactggtgtcagcccgtactgaaagcagc
ctcaggaagcggaaccaggccatgcctcgtactttcagtaaacgccggagccggttctcc
tccctctgggggctggacaccacctcaaagagaaagaccatggggcacccttcaatcaac
caggtgttcattgatgggatggaaccagtgagaaagccattggagcgcatgtttgaagac
tcatccagtgagaaatcgaaagagaaagaggactccgtgaaaagtcttcctcagcaaaac
acagacagcgacatctgggttcctgattacctgactccctcctgggtgtgtctgcccaac
aatcagcctgtcttggcaatcgtacagcctggtgagacagcgctggatgtcctgagcgct
gtctgcaagacccacaagatagatccatctagccactacctgcgtctgaaggtgtggatg
gacaaccagacgctcttttatgttcccaaatttgaagaggaaatctctgatctgctctac
aaagaaattgagatttgccacaaagctacaaaggtgatctgctttgacaaagctgagtcc
tgcaccattggatacggtttttctgtggcagtaatagatgaggacgggatgcagcagctc
catataactgaagtaaaagaagatggactggcctcagctaaaggtctgaaagcaggggat
gagatccttttgctgaatggtaaacctgcatctgccctccaaatggaagacatgagggct
gcgttcataaaccaagcgttgaccttgagtgtcagcaccctgccccagctggactctcgg
ttgttgtgcacccttccgccccggcgctccgatggtgacctggccacagacatcttctcc
cagagccaagaggacatcctggatgaggtgtcgggcttaacagtgaacagccaagatgag
agtttggatgaaggacatcggctgacccagcagagccctggaggtcatctggaagacaaa
accattaccgggatgggacagaagagcacggagcatgccactgctttctgccgcagtctc
catgacatgaattccctggactgccctatgtcatcctcctcgtcgtcgtcctcgtcgtcc
ctctccccgagccctgtgtcagctttaccgcccacagcagcaacccaaacccagagacag
ctctcccacgcagacaaactccgcaaagtcatcaatgagctggtggagacagagaagacg
tatgtcaaggacctgaggtgcctaatagagtgctacctgacacctctgcagaaagaaagc
ttccttacacaggatgagctggacgttttgtttggtaacctcggtgagatggttgagttc
caagtggagtttctgcggacgctggaagatggaatcagactggtgccggatttggagcgt
ctggaaagggtggagcaatttaagaaagtgctcttctccttgggtggttcattcctgtat
tatgccgatcgcttcaagatctacagcgccttctgtgccagccacacaaaagtcccaaag
gtcctggctaaagcaaagactgacccggatttcaaggctttcctggctgtgagaaacccc
agacagcaacattcgtccactctggagtcttacctgatcaaacccatccagagggtcctg
aagtacccgctgctgctgagggagctctactctctcactgacccagacagtgaggaacac
taccacctggatgttgcaatgaaggcgatgaacaaagttgcgagtcacatcaatgaaatg
cagaagcttcacgaagagtacggggctgttttcgaccagctcatcaatgagcagactgca
gataaaaaagaggtggcggacctctccatgggggatcttctgctgcattctactgtgatg
tggattaaccctccggcctctttggtaaagagcaaaaaggaccctgatctggctgctttt
gtgttcaaaactgcggttgtatttgtgtacaaggacagctccaagcacaggaaaaaaatc
ggtgcatctcaccgtgtgtctgtgagtgatgacagagatcctttccgtttccgtcacatg
attgcaacagactctcttcaagtccgcacccttgcaaactctgagggcacagccgtgtgc
gagatagttcacacaagatctgaatctgagggaagaccagagagaaccttccagctgtgc
tgcagttctccagacagtaagaaggacttcctgaaagcagtacattctatccttcgggac
aagcagcggcgccagcttctgaagacagagtctctgcccccaaatcagcagtatgtaccg
tttgggggcaaacgtctgtttgctcttaaaggggcaaggccgggcatgaacagagcagca
tcagccccatcacgaacgctggcccgcaggaagctggtgagaaaccgcttcaccatagat
accgaccttgttttccacggaaacaacaacagcgattcagagccttcctcgcactcaacg
ccatcccagcatgctcgtcttcaatccagcaaacctcaaggggaggacacggaccgttgg
gtggaggagcagttcgacctcgcttgctacgaggaccagggagagggtatcgacgtgggg
cagcttaaggagacggacattttgagcgacgatgatgagtactgtaagtccgttagagcg
gcgtctctagaacctctggacctgcagggcaagatgcgaggactcaatttgaatggagga
gtagaaactgacagagatgtcatgcacggcaggatgcgagagggtgaagttaatcaaatt
aagaacagtaatgaaacgggctcagtagactccttcacctcctgcggtgtgtctcttgcc
cgctgtgaaccccagacgataaagttcgcccccttgaagcagtgtgctgtagatggagcc
acaaacaaggaccataatgaaatctgggtgcggcgggaggacattgctaacgtatgcaac
agtgatgttttctga
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integrated database retrieval system
