Labrus mixtus (cuckoo wrasse): 132988013
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Entry
132988013 CDS
T10666
Symbol
smg6
Name
(RefSeq) telomerase-binding protein EST1A isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132988013 (smg6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132988013 (smg6)
03032 DNA replication proteins [BR:
lmix03032
]
132988013 (smg6)
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
132988013 (smg6)
mRNA cycle factors
Common to processing body (P body) and stress granule
132988013 (smg6)
DNA replication proteins [BR:
lmix03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
132988013 (smg6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
132988013
NCBI-ProteinID:
XP_060911059
LinkDB
All DBs
Position
14:11379874..11394628
Genome browser
AA seq
1661 aa
AA seq
DB search
MANELDRVRISAAELRGDASNSLNITDCQTGEHSVNKQHKRHEGKRPDLKRYQSVPGPGQ
RHCESEEGEAGQSDPLTADLDDPPSQCDIKSVSRNVIERHGCTYDGMDTDYMEKDRMRGD
GSGTQNCRNAGISQAKPDANLRKDFVENDSEQLEPVGAAKPMRKARKPDRAFYQPGSRRS
IQGKDGGVGSEQDKPPSNKHEHKTEQESQSITGNREGNKKTSILKQEQKDQEVKGTHDNA
KQFKSSEINRKQESRDLNKPPLPSDSSVEKMSRKIEKLSVKEKGKVGGEGDDTPVSRDGK
TTDKKARSQGVGTIEEEEKVEKKRERGNRRRRGGEKEKETNQDASRDDNEVGGGGKRDGR
KAEKERNRRAPEAEKDNKPGESHPSKGRENRRENRRGDNNNNPNRDTEKDARVQKNKDRV
VERGERNKPTANIATPTSKRYSKSDIRRSRNRTYSSSSASSVTSLDGPGRGMDRDSTKWP
CLEPKFTNKEGMAYSGEGRRRHLQSWTANGESSTESQEGSEMSDIAEDRRRKRRGGQEEQ
SAGRQREDRNGSKGNKGGCRGILRVSLETQMGTSPRGGAAKHCSPGSVPRGRGGGILVLP
TRTDVSNPPEVRQRLLFGGIRGGAASRSRGGRGGGLRRLWDPNNPDQKPALTGNQSSQHL
SLQQPVYLQTGTAYGQLHFLDTDDEVAGSPPVPQGENFRSKQAAMAYYKFQNSDNPYFYP
MSNSNTHSPGNTTSHQYSYPYHMGPYQMDPTNGMYPGPGVGQFCGSYKTAGYSQTAAGAG
LTPEEAEQQARGELGRMLRAADAQELQLSNLLSRERVSADGLDRMAQLRADLLGLYEQVI
LTDIEFSDSQNLDQALWKNVFYQVIEHFRQLLKDPTCDNTPHIRNMLLTLLDEGALFFDA
LLQKLQTVYQFKLEDYMDGMAIRARPLRKTVKYALISAQRCMICQGDIARYREQASDSAN
YGKARSWYLKAQQIAPKNGRPYNQLALLAVYTKRKLDAVYYYMRSLAASNPILTAKESLM
SLFEEAKRKTEQLERRRRQEHEGGSRGPAVKGRGRGEDGARVEIWIRPSGQASTPSSQRG
GSESSRDSEQDGELGNLSPSDLNKRFILSFLHAHGKLFTKVGMESFPDVASRVLQEFRTL
LQHGPALLGSTHLLQIITINMFTIHNANSRGEDGEVRHVLQEQSTALGLGMFALLVQRCT
ELLRDTPADPVVMADGEEEGKGEDSEGMVRVSAFPVDLRELLPSMKVWSDWMLGHPDLWN
PPPSSTDSNPDVWQCLADLCNMLACVDHGEVPLFKADTDESEGDEELTVLQLKEDRLLAG
FVPLLAAPQEPCYTDRHTEMAIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYISVSSS
SPNSSQDTRSMQDSITEKEADDVIVEAESSLSASEGDEDAEEAGDSENDIRQLKARRHVL
ANKLAQQQKRRDKIQAVLQTSGQLELEVRPLFLVPDTNGFIDHLGGLKKLLQCGTYIIVV
PLIVITELDGLAKGQDNYGGGVGSGGRSTGSRSNYNVSASHVQAVQEKARSAVAFLEKGF
EAREPYLRAMTSRGNQLESIAFRSEDTTGQQGTNDDVILSCCLHYCKDKAKDFMPQQRNG
TVKLHREVVLLTDDRNLRVKALTRNVPVRDIPAFMSWAKVG
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaactagaccgagtgcgaatctcagctgcggaacttcgaggcgacgcgtcg
aattcactcaatataactgactgtcaaacaggggagcattctgtaaacaagcagcataag
aggcatgaaggaaagcgtcctgatctgaagcgctatcagtcagtacctggacctggacag
cgtcactgtgaaagtgaggagggagaagctggtcaaagtgatcctctgactgctgattta
gatgatccgccctcacagtgtgacataaagagcgtttctcgaaacgttatagagaggcat
gggtgcacatatgatgggatggataccgactatatggaaaaagacaggatgagaggtgat
ggtagtggaactcagaactgtagaaacgctggcatatcacaggctaaacctgatgcaaat
ctaagaaaagactttgttgaaaatgacagtgaacaactggagcctgtaggagctgctaaa
cccatgaggaaagctcgcaaaccagatcgagcattttatcaacctgggagcaggaggagt
attcagggaaaggacggtggagttggaagtgagcaggataagcctccatctaacaagcat
gagcacaaaactgagcaagaatcccaatcgattacagggaatagggaagggaacaaaaaa
acgtctatactgaagcaggaacagaaggaccaagaagtaaaaggcacacatgataatgcc
aaacagtttaaatcaagtgagattaacagaaagcaggaaagccgagatctaaacaaacct
ccattaccatctgattcttcagtagagaaaatgtctcgcaaaatagaaaagctcagtgtg
aaagaaaagggtaaagttggaggtgaaggggatgacaccccagtttcaagagatgggaaa
acaactgataaaaaagcaagaagccaaggagtaggaaccatagaggaagaagagaaggta
gagaagaagagggaaaggggaaaccgcagaagaagaggaggagagaaggaaaaagagaca
aatcaggatgccagtagagatgataatgaagtgggtggtggaggaaagagggacgggagg
aaagctgagaaagaaagaaacagaagagcacctgaagcagaaaaggataataaaccaggg
gagtcacacccaagcaaaggaagagagaaccgcagagaaaacagaagaggagacaataat
aacaacccgaacagagatactgagaaagatgcaagggtgcaaaaaaataaagacagggtt
gttgaaagaggggagagaaacaagccaactgcaaatattgcaacaccaacttcaaaacgc
tattccaaatcagatattcggcgctcacgaaatcgaacttatagcagtagctcagccagc
agtgtgaccagtcttgatggtccaggaagaggaatggatagggatagtaccaagtggcca
tgcttggaaccaaagttcactaacaaagagggtatggcttatagtggagaagggcggagg
agacatctgcaaagctggacagccaatggggagtcttctacagaatcgcaagaagggagt
gagatgagtgacatagcagaagatagaaggaggaaaagaagaggtggacaggaagagcaa
agtgcagggaggcaaagagaagacaggaatggatcaaagggaaacaaaggtggatgtcgg
ggaatcctaagggtgtctctagaaacccagatgggtacctcgccacgtggtggggctgcc
aaacattgctcaccaggctcggttccacgtggcagaggtgggggtatactggtgctccca
acccggacagatgtctctaatccacctgaggttaggcagagacttctctttggtggaata
agaggaggagctgctagcaggagtagaggaggcagaggaggtggattgagacgactctgg
gatccaaataaccctgaccagaaaccggctcttaccggaaaccaatcctcacagcactta
tctctccaacagccggtttatctccaaacagggactgcatatggacagcttcactttttg
gacacagacgatgaggttgcaggaagtcctccagttccacagggtgagaattttcgatca
aagcaagctgccatggcctactacaaattccaaaattccgacaacccctacttctacccc
atgtccaacagcaacacacatagccctggtaacactaccagccatcagtattcatatcct
taccatatggggccctatcaaatggatcccacaaacggtatgtacccaggccctggtgtg
ggtcagttctgtggtagctataagacagcaggttactcccagacagctgcaggagctggt
ttgactccagaagaggcagagcaacaagccagaggggagctagggagaatgctgagggct
gcagatgcacaggagctccagctcagtaacctgctttccagggagagagtgagcgctgac
gggctggatcggatggcccagctcagagctgaccttttggggctctatgagcaagtcatc
ctgacagacattgagttctcagactctcagaacttggatcaggctttgtggaagaacgtc
ttttaccaggttatagagcacttcagacagttactcaaagaccccacttgtgacaacact
cctcatatcaggaacatgctgctcacactgcttgatgagggagcactattctttgatgca
ctgcttcagaagctgcagacagtgtaccagtttaagttggaggattatatggatggcatg
gctataagggctcgaccattacgcaaaacggttaagtatgcacttatcagtgcacaacgc
tgcatgatatgtcagggagacatagcacgttaccgggaacaagccagtgactcggccaac
tatggaaaggctcgcagttggtacctgaaagcccagcagattgcccccaaaaatggacga
ccatataaccagctggccctgctggcagtctatacaaagaggaagttggatgctgtgtat
tattacatgcgcagcttggcagcttccaaccccatcctgacagcaaaagaaagcttgatg
agtctctttgaggaagctaagcggaagacagagcagctggagcgaaggaggaggcaggag
catgaaggaggctccaggggtcccgcagtaaaaggaagaggaagaggggaagacggagca
cgtgtagagatttggattcgccccagtgggcaagcttcaacgccttcctcacagagggga
ggtagtgaatccagcagagactctgaacaggatggagaacttggcaatctgagccctagt
gatctaaataaaaggtttatactaagtttcctgcatgcacatggaaagctcttcactaaa
gttggcatggagtccttcccagacgtggcgagccgtgttctgcaggagttcaggacgctg
cttcagcatggccctgctctactcggcagcactcacttgctgcagatcattaccatcaac
atgtttaccatacacaatgcaaacagcagaggtgaagacggagaagtgcggcacgttttg
caagagcaaagcactgccctgggtctgggcatgtttgcactgctggtgcagcgttgtaca
gagctgctcagagacactcctgcagatccagttgtgatggcagatggagaggaggagggt
aaaggggaggactcggagggtatggtgcgggtctcagcttttccagtggaccttagggaa
ctactgcccagcatgaaagtctggtccgactggatgctgggacacccggacctttggaac
ccaccaccatctagcactgatagcaaccctgatgtttggcagtgcctggctgacctgtgt
aacatgctggcatgtgtggaccacggggaggtgccgctgttcaaagccgacactgacgag
agcgagggagatgaggagttgacagtgctgcaactgaaagaggacagactacttgctggc
tttgtaccactgctggctgcaccacaggagccctgttacaccgacagacacactgaaatg
gcaattgcagcagattgtaagagggtcaccgtgcttaagtactttctggaggctttgtgt
ggacaggaggagcctttgttggccttcaaggggggcaaatacatatctgtgtcttcttca
tcgccaaacagctcacaggatacacggagcatgcaggattctattacagagaaagaggct
gatgatgtcatagtggaggccgagtcctctctctccgcatcagaaggagacgaggatgct
gaggaggcaggagacagtgagaatgacatcagacagttaaaagctcgacgtcacgtcctt
gccaacaagctggcacagcaacagaagcgcagagataaaatacaggcagtgctgcagacc
agtgggcagctggagctggaagtgaggccactctttttggttccagatacgaacggattc
attgatcacctgggagggctgaagaaactcctccagtgtggaacatacataatagttgtc
ccacttattgtgattacagagctggatggcttggctaaaggccaggacaactatggtgga
ggagtggggtcaggaggccgcagcactggcagccgcagtaactacaatgttagtgcgagc
cacgtgcaggcggtgcaggagaaggcccggtcagcagtggctttcctggagaaaggattt
gaagccagggaaccttacctaagagccatgacaagccgaggaaatcagctcgagtctatc
gccttccgcagtgaagacaccactggacagcagggtaccaatgatgatgtgattctgtcc
tgctgtctccactactgcaaggacaaggccaaagatttcatgcctcagcagagaaatgga
acagtgaaactccacagagaggtggtgctactcacagatgaccgtaacctgcgcgtcaaa
gcgttgacccgcaacgtcccggtccgggacatccctgctttcatgagctgggccaaagtg
ggctga
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integrated database retrieval system
