Labrus mixtus (cuckoo wrasse): 132989995
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Entry
132989995 CDS
T10666
Symbol
hspg2
Name
(RefSeq) basement membrane-specific heparan sulfate proteoglycan core protein isoform X1
KO
K06255
basement membrane-specific heparan sulfate proteoglycan core protein
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03272
Virion - Hepatitis viruses
lmix04512
ECM-receptor interaction
lmix04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
132989995 (hspg2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132989995 (hspg2)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132989995 (hspg2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmix04147
]
132989995 (hspg2)
00535 Proteoglycans [BR:
lmix00535
]
132989995 (hspg2)
Exosome [BR:
lmix04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132989995 (hspg2)
Proteoglycans [BR:
lmix00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
132989995 (hspg2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
Laminin_B
Laminin_G_1
Laminin_G_2
V-set
EGF_laminin
EGF_LMN_ATRN
Ig_6
C2-set_2
Laminin_G_3
Izumo-Ig
Ig_PDGFR_d4
EGF
EGF_TEN
C2-set
hEGF
Motif
Other DBs
NCBI-GeneID:
132989995
NCBI-ProteinID:
XP_060913968
LinkDB
All DBs
Position
15:complement(24736713..24839904)
Genome browser
AA seq
2994 aa
AA seq
DB search
MEEFQLVDLSRRFLNLDSFWILPRQFLGSKIDAYGGTLKYKVRYTLARGHTEVVEKPDVM
LVGNGRRLVYRRGSTTAGRVVNQKEIKFTEENWQHSNGRPVSREDLMMTLANLDGINIRT
IYDNHMVSVALSDIIMSTTSVEFSTMGHAKDVEECRCPPGYSGLSCERCTPGFERVPGGS
YLGTCAGCNCNGHASACDPINGHCLSCQHNTEGPQCDKCRPGYFGDPTRGRPDDCKPCPC
PYYETSRRFSDTCFVDVDQQPTCDACKPGYTGRRCEKCAAGYQGNPLLPNGKCVPNSSSA
KCDNRGTISSNSRPCSCKNNVAGALCEECKQGFFHLSESNPEGCLRCFCMGVTKQCASST
WNRDQVRGGVNAQLFSLSNSGSTVTINEGISQRGSSEVFFRSFATVPNDIYYWVLPESFR
GDKVTAYGGELLYTVRFEPQQRSLVIDGQPDVVLQGNGIFLEHYSKTKPLPRDPRDPRVV
TVTFRESAWRRADGQPCTREHLLMALADVTLFMIRASYADKMAETSISDIKMDIAVPQST
GNERALEVEECACPQGYRGPSCQECDEGYTRTTSGLYLGTCERCDCNGHASGCDPETGKC
LQCLHNTAGARCERCQTGYYGNPVKDGAQACQPCPCPGTSSSNQFSPTCYLEADGQPTCD
SCPPGYTGRRCERCAAGYTGNPQLGQRCIVGGNDLNGNCYSCDQRGSEGCNGPLCSCKMN
VEGPSCSNCKSGTFHLSPDNKDGCLSCFCMGVTQQCTSSTYYRDLVSSVFTPGNFQGFAL
VNRQRTNRISTGFTVEVSTEGTQLSYSNFDYLGQEPHYWQLPGVYQGDKVGSYGGKLKYT
ISYVAGTRGTTLDDGDVQIIGNDITLVASQPWQRREHGSRETHQFEFVFKEENWQRLDGM
PATREHLLMVLADLDDILIRASYSSEMRSSSIYDISMEVAVPNYSGLAQALEVEQCRCPP
GYQGLSCQDCASGYTRTGGGLYLGHCELCECNGHSDSCHPENGICTSCLHNTQGELCEQC
AQGFFGDPTVGTPEDCQPCACPHTDPDNQFSPTCESLGNGGYQCTACQPGYTGQYCERCA
PGYVGNPQERQKCRPYDAAASLVVKVYPERVLAPQGGSVTLRCQVSGSPPHYFYWSREDG
RPISSSADRRRQGAELYIHSVQSSDAGVYVCTCRDQRSTNRSRAEIVVTSVVSKPIEVTI
EEPKAQTVRVGSTVNFICTAKSKSPAYTLVWTRNGNGKLPNRAMDFNGILTIQNVQPEDA
GVYVCTGSNMFAMDEGNAILYVPEASKTEMFYTAYEMFEGHRKPAEGAQPVATINPSVLN
VQQGQRAEFRCTVTGNPTPAIEWIGGPGNRMSPRAVVRGGVLTFTAVDPADEGEYTCKAL
NTHGEHTARGSLYIQKSNPIGLGTKPQVQVSPQNIKVHEGDTLRLYCRASGSPTPKLTWK
KTGDQIPAQAIPSHGFHQFKSNSLDVLQRRIEELQARMDRTDIGTLLIPNIKMSESGTYV
CEGSNSIGSSSSPIEVTVIKADYSSSVVSIQPSIADVQEGQSLELNCFAPGNPPPKVTWT
RASGRLSSNHQVLGSQLRILSASPEDSGEYICRVQGNLGNPGSHVHQASVSVSVTSSSSR
LQSPIIAVEPHRASVRVGETASFRCRIYSGAQPIRLEWKLANNQPLPDNVKVGPDGSVIT
ITSTRPMNHGAYRCVASNPFGITHTMVSLIIKESPVATVTPVGPVRVRVGEPINLECQAS
GEPRPSVSWHRLDSNRKTMLSSPVPMESNAVMQILVARSEDSGTYVCTARNNEGSTETKV
EVVVEGGAQVPSVPRASVPEPLMVIVEGQTATLRCDAHGLPSPTITWSKLRSPLPWRHKV
VDNALVLPTVGRQDSGEYICTATNNMGTTEVTITLDVETLPYATSLPDDVAVRVGEVIRL
QCLAHGTPPLDYTWTKLDGNLPPRAEVSGGDLQINLATAEDAGSYKCVASNKVGNSEVVA
KVTVRSPLAVRVSPQVEVKAQGSAVEFTCSAAGGIETKIEWLKEGGALPPNHHVKDGVLR
IENLEQSNEGVYICRASGVYGQAQDSARLTIQALPKVMINVRTSVQTVMIGNSVEFECQA
VGDPEPTVKWSKVGGSLPAHIMVKGGMLKIEQVTEADAGQYRCTATNDVGSVQSQVVLNV
QSLPQIAALPETKEVTVGSDAVLPCVASGYPVPDIKWAKLDAELPPKCFQDVNVLTVPRV
THEDSGTYVCTASNKQGKVEAFTTLEVHERVMPYFTQEPLSYLTLPTIKNAYKSFSIKIN
FRPDNVDGLILYAGMILYNGQRRTTGADFISLGLVGGRLEFRFDVGSGMASIRDPNPIKL
GEFHTVELSRNSTLGYIIVDGGEPINGSSQGKFQGLDLNEELHVGGYPNYTSLAKTAGIK
TGFVGCIRQLVIQGEEVIFKDLDRSSTGVTNCPTCKDQPCQNGGRCEDSDASLYSCSCPR
GFTGSNCQHHPSLHCHSEACGQDATCINRPNGLGYDCRCHLGKFGNKCMDGELVTTPMFD
GEESYIAYPPLTNIHDDLRVELEFKPLERDGLMFFCGGKKMKVEDFVAVSMVDGHVEFRY
ELGTGQAILRSPEPVSLGQWHKVVAERNKRAGHLRVDQGPVERKTSPGKAQGLNIHTAMY
LGGVPNMDILPKPANVSEMFEGCIGEVSINNKKLDLSYSFTESKSIRKCVDDSPCDRRPC
LNGGHCMSSVEYEYQCLCKDGFEGEHCEVVRDVCQSDLHCQNGGSCVDGQCLCTPNHSGL
NCEESQVSSSPAALRNLEDSEANDSPYQYAAHFHNDGYIALPRSIFPRSAHDSPETIELE
INTGSSEGLIFWQGVETNGARNLRKVHASKKDHGENGKGKDFISLGLQNGQLVFSYQLGS
GEAEILSRKSINDGRWHKITAVRTGKDGYIKVDGEAELHGQSKGRSLMVNTKGSIYLGGA
PDMVAMTGGKFSSGMTGCVRNLTLLNARPGQQPAQAIDLQAHAALGINVQPCFS
NT seq
8985 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttccagctcgtcgacctgtcccgccgcttcctcaatctagactccttctgg
atcttgcctcgccagtttctgggcagcaagatcgacgcctacggaggaaccctgaagtac
aaggtgcggtacacattggcgcgcggccacactgaggttgtggagaagccagatgtgatg
ctggttggaaatggacgcagacttgtgtaccgcagaggaagcaccaccgcgggccgagtg
gtcaaccagaaggagatcaaatttactgaagaaaactggcagcactctaacggtcgcccc
gtgagcagagaagatctgatgatgacgctcgccaacctggacggcatcaacatccgcacc
atctacgacaaccacatggtcagcgtggcgctcagtgacatcatcatgtcgaccacttct
gtggagttcagcaccatgggtcatgctaaggatgtggaggagtgcagatgtcctcctgga
tattcaggcctgtcctgtgagaggtgcacccccggtttcgagcgcgtccccggcggctct
tatctcggcacctgtgctggttgtaactgcaacggacatgccagcgcctgtgatccaatc
aacggccactgtctgagctgccagcacaacacagagggccctcagtgtgacaaatgtcgc
ccaggatacttcggtgacccaacccgaggtcgccccgatgactgcaagccgtgcccctgc
ccttactacgagacctcgaggcggttttctgacacctgcttcgtggatgtcgaccaacag
ccgacatgtgatgcctgcaaacctggctacacaggaagacgctgtgaaaagtgtgctgct
ggataccagggaaacccccttctgcctaatggaaaatgtgttcctaactcttcgagcgcc
aagtgtgataacagaggaaccatcagctccaacagcagaccatgcagctgcaagaacaac
gtggcaggcgctctgtgtgaggagtgtaagcagggcttcttccacctatccgagtccaac
cctgagggctgtctgcgctgtttctgtatgggcgtcaccaaacagtgcgccagctccact
tggaatagagatcaggttcgaggcggggtgaacgcgcagctcttctccctctccaacagc
ggcagcaccgtgactatcaatgaaggaatctcccagagaggctcctctgaagtgttcttc
cgctcattcgccaccgttccaaacgacatctactactgggtcctgcctgagagcttcaga
ggagataaggtgacggcttatggcggggagctcctctacactgtgcgctttgaaccacaa
cagcgctcgctggtgattgacggtcagccggatgtggttctccagggcaatggcatcttt
ctggaacactactctaaaaccaagcccctcccacgagacccacgagacccacgcgttgtc
accgtgaccttcagagagtctgcatggcgtcgcgccgacgggcagccatgcacccgcgag
cacctcctgatggctttggctgacgttactctcttcatgattagggcctcctacgcagac
aagatggcagagaccagtatctcggacatcaagatggacattgctgttcctcaatccacc
ggtaatgaacgtgctctggaggtggaggagtgcgcctgccctcagggatacagaggaccc
tcttgccaggagtgtgatgaaggttacacgcggaccacctccggcctttacctgggcact
tgtgagaggtgtgattgcaatggtcacgccagcggctgtgacccggagaccggcaagtgc
ctgcaatgtcttcataacaccgctggggcaaggtgtgagcgctgtcagactggttactat
ggaaaccctgtgaaggatggtgctcaggcctgccagccctgcccctgtcctggaacctct
tccagcaaccaattctctccaacctgttatctggaggcggatggtcagccgacctgtgac
agctgcccccctggatacacaggccgacgctgtgaaagatgcgcagcaggatacactggc
aacccccagcttggacagaggtgtatcgttggcggcaatgatctcaatggtaactgttac
agctgtgaccaaagaggaagtgaaggttgcaatggacctctctgcagctgcaagatgaac
gttgaaggcccatcttgctccaactgtaagtctggaaccttccatctcagcccagacaac
aaagatggctgcctgtcctgtttctgtatgggcgtcactcagcagtgcaccagctctacc
tactacagagacctggtgtcctcagtcttcactccagggaacttccagggattcgctctg
gtgaaccgtcagcgcaccaatcgtatatccactggtttcaccgtggaggtttccaccgag
ggaactcagctgtcctacagcaacttcgactacctgggacaggagcctcattactggcag
cttccaggggtctaccagggagacaaggttgggtcttacggcggtaagcttaaatacacc
atctcctacgtggccggtacacgaggaacaacactggatgacggtgacgtccagattatt
ggtaatgacatcactctggtagccagtcagccctggcagaggagggagcatggcagcaga
gagactcaccagtttgagtttgtcttcaaagaggaaaactggcagcgtcttgatggcatg
cccgccacccgagagcacctgttgatggttttggctgatctggacgacatcctgatcaga
gcgtcttactcctctgagatgaggtcctccagcatctatgacatcagcatggaggtcgcc
gtgccaaactacagcggtttggcccaggcccttgaggtggagcagtgccgctgcccgcct
ggataccagggactctcttgtcaggactgtgcatctggatacactcgcactggaggaggt
ttatacctcggtcactgtgagctctgtgaatgtaacggccactctgactcctgccaccct
gagaatggcatctgcacgagctgcctgcacaacactcagggggagctctgcgagcagtgc
gcccagggcttcttcggtgaccccactgttggcacaccggaggactgccagccctgcgcc
tgccctcacactgacccggacaaccaattctccccgacctgcgagagcctcggtaatgga
ggctaccagtgcaccgcctgtcagcctggatacaccggacagtactgtgaacgttgtgct
cctggatatgttggaaatccacaggagagacagaagtgtcgcccatacgatgctgcggcc
tccctggtggtgaaggtctatccagagagggtcctggctccccagggcggctccgtcact
ctccggtgtcaggtctccggctctcctccgcactatttctactggtccagagaggatgga
cgacccatctccagcagcgcagacagacgcagacaaggagcagagctgtacatccacagt
gtgcagtcgagtgatgccggggtctacgtctgtacctgcagagatcagcgcagcaccaac
aggagccgggctgaaattgttgtcacaagtgtcgtgtccaaacccattgaggtgactatt
gaggagcctaaagcccagactgtcagggtgggatcaactgtcaacttcatctgcactgca
aagagcaagtctccagcttacaccctggtctggaccaggaacggcaacgggaagcttccc
aaccgcgccatggacttcaacggcatcctgacaattcagaacgtccagcccgaggatgct
ggcgtctacgtctgcacgggctccaacatgttcgccatggacgagggcaatgccatcctc
tacgtgccagaggcctcaaagactgagatgttttacacagcgtatgaaatgtttgaagga
cacagaaagcctgcagagggggcccaacctgtggccaccatcaatccttcagtgctgaat
gtccagcagggtcagcgagcagagtttcgctgcacggtgactggaaacccaacccctgct
atagaatggatcggaggtccaggaaacagaatgagccccagggccgtggtacgaggtggt
gttctgaccttcacagcagtggacccagctgatgagggggagtacacctgcaaggccctg
aacacacacggagagcacacagcgcgaggttccctctatatacaaaagtctaacccaata
ggattaggcaccaagccccaggtccaagtcagtccccaaaacattaaagtccacgagggc
gacaccttgaggttgtactgccgagcatccggatctccaaccccgaaactcacctggaag
aaaaccggagatcaaatacctgcacaggccattccctctcacggtttccatcagtttaaa
agcaacagtctcgatgtgttacagagacgtattgaggagctgcaggcccgtatggaccgc
acagacatcggtactctgctcatcccaaacatcaaaatgtccgagtcgggcacttacgtg
tgtgagggcagcaacagcatcggctcgagcagttctcccattgaagtcactgttatcaaa
gcggactacagctcctcagtggtcagcatccagccatctatagctgacgtccaggagggt
cagagtctggagctcaactgttttgctcctggaaaccctcctcctaaagtcacatggacc
agagccagcgggcgcctctcctctaaccaccaggttctgggcagtcagctgcgtatcctg
tcggcctctccagaggactcaggggagtacatctgtcgggtgcagggtaaccttggaaac
ccaggctctcatgtccatcaggcctccgtctctgtttccgtcacctcgtcttcctcacgt
cttcagagtccaatcatcgccgtcgagcctcacagagcttcggtgcgcgttggggagacg
gccagcttcaggtgcaggatatacagcggagcccagccaatcagactggagtggaaactg
gccaacaaccagccgctgccagataacgtgaaagttggtcctgatggctctgttatcacc
atcaccagtactcgcccaatgaaccatggcgcctaccgctgtgtggccagcaacccgttt
ggcatcacccacaccatggtgtctttgatcatcaaagagtctcctgtggccaccgtcact
cctgttggacccgtgcgtgtcagggtgggtgaacccattaaccttgaatgccaggcgtca
ggagagccccgcccctctgtgtcctggcacagactggacagcaaccgcaagaccatgctg
agcagccccgtgcccatggagtctaatgcggtcatgcagatactagtggcccgttcagaa
gacagcggcacctatgtctgcacggctcgcaacaacgagggcagcactgagacaaaggtg
gaggttgtggttgaaggaggcgctcaggtgccctcagtgcccagagccagtgtccccgag
ccgctcatggttatagtggagggacagactgcaacgctgcgctgcgatgctcacggttta
ccctccccgacgatcacctggtccaagctgcggtctcctctgccttggagacacaaagtg
gtggacaacgccctggtcctgcccactgtgggccgccaagactctggagaatacatctgc
accgccaccaacaacatgggcaccactgaagtcaccatcacgctagatgtagagacgctc
ccgtacgccacctcgctgcccgatgacgtcgccgtgcgggtcggggaggtgatcaggctg
cagtgtctggctcacggcactcctcctctggattacacgtggaccaaactggacggaaac
cttcccccgagggccgaggtcagcggaggagaccttcagatcaacctggccaccgccgag
gacgctgggagctacaagtgtgtggccagcaacaaagtgggcaacagcgaggtggtcgct
aaagtcacagtcagatccccattggcagtgcgagtatcaccccaggttgaagtgaaagct
cagggcagtgctgtggagttcacctgttcagcagcaggaggtatagaaaccaagattgag
tggctgaaggagggaggagctctgccacccaaccaccacgtcaaggacggagtgctcagg
attgagaaccttgagcagagcaatgaaggcgtttacatctgcagagccagcggtgtgtac
ggtcaggcccaggactctgccaggttgaccatccaagccctgccaaaggtgatgatcaac
gtgcgcacttcggtgcagactgtgatgatcgggaactctgtggagtttgagtgccaggct
gtcggtgacccggagcccactgtcaaatggagtaaagtgggtgggtctctgcctgctcac
atcatggtgaagggaggcatgttgaagatcgagcaggtgacggaggctgatgccgggcag
taccgctgcacagccaccaacgacgtgggctcagtacagtcgcaggtcgtcctcaacgtc
cagtcccttcctcaaattgctgcgctgcctgaaactaaggaggtgacagttggctcggat
gcagtcctgccctgtgtggcttcaggataccctgtaccggacatcaaatgggccaagttg
gatgcagagcttcctccgaagtgtttccaggacgtcaatgtgctgacggttccccgggtc
acccatgaggattctgggacgtacgtctgcaccgcctccaacaaacaggggaaagtggaa
gcctttaccacacttgaagttcacgagagagtgatgccatacttcacacaggaacccttg
tcctacctcaccctgcccaccatcaaaaacgcttacaaatctttcagcatcaagatcaac
ttcagacctgataatgtcgatggtctcatattgtacgctggtatgatcctctacaacggc
cagagaaggaccaccggtgcagactttatctctctgggactcgttggcggtcgtttggag
ttcaggtttgacgtcggctcgggcatggcctccatacgcgaccccaaccccatcaaactg
ggggagtttcacaccgtcgagctgtctcgtaacagcaccctgggctacatcatcgtggac
ggaggggagccgatcaacggcagctcgcagggcaagttccagggactggatctgaacgag
gagctgcatgtgggcggttaccccaactacactagtctcgccaaaactgccggcattaag
actggttttgtcggctgtatccgtcagctggtcatccagggcgaggaagtcatcttcaaa
gacctcgaccgcagctctacaggagtcacaaactgccccacgtgcaaagaccaaccatgc
cagaatggagggaggtgtgaggactcggatgccagcttgtattcgtgcagctgccccaga
ggcttcacaggcagcaactgccagcatcacccatcccttcactgtcactcagaggcctgc
ggacaggatgccacttgcattaaccgccccaatggcctgggctatgactgccgctgccat
ctcggaaagtttggaaacaaatgcatggatggggagttggtgaccactccaatgttcgat
ggagaggagtcgtacatcgcctatcctcccctgaccaacatccacgatgacctgcgggtc
gagctggagttcaagcccctggaaagagacggtctcatgttcttctgcggggggaagaaa
atgaaagtggaggactttgtggccgtctccatggtggatggacatgtagagttcagatac
gagctgggcacaggccaggccatccttcgcagcccagagccggtttctctgggccagtgg
cacaaagttgtggccgagcggaacaagagggccggccacctgagggtcgatcaaggcccg
gtggagaggaagacatctccaggaaaagcccagggcctgaatatccacacagccatgtac
ctgggaggagtccccaacatggacatcctgcctaagcctgcaaatgtcagcgagatgttt
gagggatgtataggagaggtttccatcaacaacaagaagctagatttgtcctacagcttt
acagaaagcaaatctatccgcaagtgtgtggacgacagcccctgtgaccgccggccctgc
ctgaacggtggacactgcatgtcgagtgttgaatatgaataccagtgcctctgtaaggat
ggatttgaaggtgagcattgtgaggtggtgagagacgtgtgccagagcgaccttcactgc
cagaacggcggcagctgcgtcgatggccagtgcctgtgtacacccaaccactctggcctg
aactgtgaagaaagccaggtctcctcctcccccgcagccctgaggaatttggaagatagc
gaggcaaatgattctccatatcagtatgcagctcatttccataatgatggatacattgcc
cttcctcgatccatctttccaaggagtgcccatgactcaccagagaccattgaactggag
atcaacactggctcctctgagggcctgattttttggcagggagtggagaccaatggcgca
cgcaatttgcgaaaggtgcatgctagtaaaaaggatcacggagagaacggtaaaggaaag
gacttcattagcctcggcctacagaatggacaacttgttttcagctaccagttgggcagc
ggagaggcagaaatcttgtccaggaagtccataaatgacgggagatggcataagatcaca
gcagtcagaactgggaaagatggatacatcaaggttgatggagaagctgagctgcatgga
cagtctaaaggcaggagcctcatggtgaacactaaaggcagtatataccttggtggagcc
ccggacatggtggctatgacgggagggaagttttcttcgggaatgacgggctgcgttagg
aacctgacactgctgaacgcccggccgggacagcagcccgcccaggccatcgacctgcaa
gcccacgcagccttaggcatcaacgtgcagccatgcttttcatag
DBGET
integrated database retrieval system
