Labrus mixtus (cuckoo wrasse): 132992842
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Entry
132992842 CDS
T10666
Name
(RefSeq) thrombospondin-1-like
KO
K16857
thrombospondin 1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04115
p53 signaling pathway
lmix04145
Phagosome
lmix04148
Efferocytosis
lmix04350
TGF-beta signaling pathway
lmix04510
Focal adhesion
lmix04512
ECM-receptor interaction
lmix04820
Cytoskeleton in muscle cells
Brite
Membrane trafficking [BR:
lmix04131
]
Endocytosis
Phagocytosis
Opsonins
132992842
Glycosaminoglycan binding proteins [BR:
lmix00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132992842
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132992842
NCBI-ProteinID:
XP_060918353
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Position
18:11955976..11964917
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AA seq
1172 aa
AA seq
DB search
MMLCGIVLLLMLWSCESARLAESRDDNSVYDLFDLARVNKRHHGVSLVKGADPYSPAYKV
LNADLIPPVPDSSLRDLLDSIQTERGFLLLVNLKQFKKTRGSLLTIEKNDGSGPIFEIIS
NGKANTLDVFFSTSDQQQLVSIEDADLASGHWKNITLFVQDDRVQLYVGCEEINVSELDV
PIQRVLSQEVADIARLRIGKGATKDKFMGVLQNVRFVFGTTLDAILRNKGCQSGAALTDV
MTLDNPVNGSSPAIRTDYTGHKTKDLQSVCGFSCEDLAGMFKELKGLGVVVKQLSNELRK
VSEDSTLLKNQMNVYNGICIHNGIVHNDQDEWTVDGCTECTCQNSATVCRKISCPLIPCA
NATVPDGECCPRCGTPSDYAEDGWSPWSEWTPCSVTCGRGIQQRGRSCDRINSNCEGTSV
QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGMDCQGQG
RQTEICQKSSCPINGGWGPWSPWDSCTVTCGGGIQTRTRLCSDPVPKYGGKDCVGDANVS
QVCNKQDCPIDGCLSSPCFLGTRCTSFPDGSFRCGKCPLGYTGNGITCKDIDECTEVLDA
CHTHNGVHRCENTEPGYNCLPCPARFSGPQPFGRGVEQATAKKQVCKPRNPCQDGSHDCH
KNANCIYLGVYSESMFRCECKPGYAGNGRICGEDTDLDGWPNTNLVCVENATYHCKKDNC
PNLPNSGQEDHDKDGLGDECDNDDDNDRIPDDRDNCPRVYNPAQYDTDRDDVGDRCDNCV
FEANADQTDTDNNGEGDACAVDIDGDGILNANDNCPYVYNVDQRDTDRDGVGDHCDNCPL
EHNPDQVDSDSDLIGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD
DNDGIPDDKDNCRLAFNPDQVDSDGDGRGDVCKDDFDQDNVLDIYDVCPENFAISETDFR
RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFSAVDFSGTFFINTDR
DDDYAGFVFGYQSSSRFYTVMWKQVTQTYWSHTPTRAQGYSGLSIKVVNSTTGPGEHLRN
ALWHTGDTAGQVRTLWHDPKNIGWKDFTAYRWHLIHRPKTGLIRVVMYEGKRIMADSGNI
FDKTYAGGRLGLYVFSQEMVYFSDLKYECRDT
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgtggcatcgttttgctgttgatgctttggagttgtgagagcgcgaggttg
gcagagagtcgggatgataacagtgtgtatgacttattcgatctggcccgggtaaacaag
agacatcatggagtgagtctggtcaaaggcgcagatccttacagccctgcatacaaagtc
ctgaacgcagacctgatccccccggtccccgacagctccctccgggacctccttgactct
atccagactgagaggggctttctcctcctcgtcaacctgaagcagttcaagaaaaccagg
ggcagccttttgaccatcgagaaaaatgacggatctggaccaattttcgagataatttcc
aacgggaaggcgaacactctggatgtcttcttctccacctcggaccagcagcagctggtg
tccattgaggatgcggatctggcctcagggcactggaagaacatcactttgttcgttcag
gacgaccgagtgcaactttatgtcggctgtgaggagatcaatgtgtctgagcttgatgtg
ccaatccaaagagtgctgtctcaggaggtggctgacattgccaggctcaggattggaaaa
ggagcaacaaaggacaaattcatgggggttcttcaaaatgtgcgctttgtatttgggaca
acccttgatgccatactgagaaataagggatgccagagtggagctgccttaactgatgtc
atgacccttgacaacccagtcaatggctccagtcctgccattaggactgattacaccggc
cacaaaaccaaagatctgcagtctgtctgcggcttctcttgtgaggacctcgccggcatg
tttaaagagctcaagggactcggtgtggttgttaaacagctgtccaatgagctgcgcaaa
gtgtctgaggacagtactctgctgaaaaatcaaatgaatgtctacaatggcatctgcatt
cacaacggcatagtgcacaatgaccaagatgagtggaccgtggacggctgcaccgagtgc
acctgccaaaactctgctactgtgtgtcgcaaaatctcctgccctctgatcccgtgtgct
aatgccaccgtgcctgatggagaatgctgccctcgctgtggaacaccaagtgattatgca
gaggatggctggtccccttggtctgaatggaccccttgttctgtgacatgtggtcgtggc
atccagcagcgtggacgttcttgtgaccgcatcaacagcaactgtgagggcacctctgtc
cagacccgtgactgctacccccaggaatgtgacaaacgcttcaaacaggatggtggttgg
agccactggtctccatggtcttcatgctctgtgacctgcggtgagggggtcatcacccgg
atacgcctctgcaactctccaacaccccaaatgggtggtatggactgccaaggacaggga
cgtcaaactgaaatctgccaaaagtcgtcttgtcctatcaatggaggttggggaccctgg
tcaccctgggacagctgcactgttacctgtggtggtggaatccagacccgcacacgtctc
tgttcagaccctgttcccaaatatggaggaaaagattgtgttggtgatgcaaatgtgtct
caagtgtgcaacaagcaggactgccctattgatggttgtctctccagcccatgcttcctt
ggcacaagatgcacaagcttcccagatggctctttcaggtgtggcaagtgtccacttgga
tacactggaaatggcatcacttgcaaagacattgatgagtgcacagaggtccttgatgct
tgccatacgcacaatggagtccatcgttgtgagaacacagagcccggttacaattgtttg
ccctgccctgcgcgattctccggccctcagccttttggcagaggagtggaacaggcaact
gctaaaaaacaggtttgtaaaccccgtaacccttgccaggatggtagccacgactgccat
aagaatgcaaactgtatctacttgggcgtctactctgagtccatgttccgctgtgagtgc
aagccaggttatgctgggaatggccgtatttgcggagaggacactgatcttgacggatgg
ccaaacactaacctggtgtgtgtggagaacgccacctaccactgcaaaaaggataactgc
cccaaccttcccaactctggccaggaagaccatgacaaagatggcctgggtgatgaatgt
gacaatgatgatgacaatgatcggatccccgatgatagggacaactgcccaagagtgtac
aaccctgcccagtatgacacagacagggatgatgttggcgaccgctgtgataactgtgtg
tttgaggcgaacgcagaccaaactgacactgacaacaatggagagggagatgcctgtgct
gtggacattgatggggatggcattctgaacgcaaacgacaactgcccatatgtttacaat
gtggaccagagggacactgacagggatggtgtgggcgaccattgtgacaactgccctctg
gagcacaaccctgatcaggttgactcagactcagatctcattggagacaagtgtgacaac
aaccaggacattgacgaggacggtcaccagaacaacttggacaattgcccttacatcccc
aacgccaaccaggctgaccatgacaaagatggcaagggtgacgcctgtgaccatgatgat
gacaacgacggcattcctgacgacaaagacaactgtagactggcctttaacccagatcaa
gtggactctgatggtgatggccgtggtgatgtgtgcaaagacgattttgaccaagacaac
gttcttgacatctatgatgtgtgtcccgagaactttgccatcagtgaaacagacttccgc
agattccaaatggttcctctggaccccaagggcacctcccaaattgaccccaactgggtg
gtgaggcatcagggcaaggagttggtacagactgtcaactgtgatccgggcattgctgtt
ggttatgatgagttcagcgcagtcgatttcagtgggacattcttcatcaacacggacaga
gatgacgactatgccggatttgtgtttggctaccagtccagctcacgcttctacacagtc
atgtggaaacaagtcacacaaacctactggtctcacacacccacaagagctcagggctac
tctggcctgtcaatcaaagtggtcaactccaccactgggcctggcgagcacctgagaaat
gccctgtggcacaccggagacacagcaggacaggtacgcactctgtggcatgaccctaag
aacattggctggaaggactttactgcctacagatggcatctaatccacagacctaagact
ggactgattagagtggtcatgtatgaaggcaagagaatcatggccgattctggaaacatc
tttgacaaaacatatgcaggtggacgacttggcttgtacgtcttctctcaggagatggtt
tacttctcagacctcaaatatgaatgcagagatacataa
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