Labrus mixtus (cuckoo wrasse): 132992842 Help Entry 132992842         CDS       T10666                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism lmix  Labrus mixtus (cuckoo wrasse) Pathway lmix04115   p53 signaling pathway lmix04145   Phagosome lmix04148   Efferocytosis lmix04350   TGF-beta signaling pathway lmix04510   Focal adhesion lmix04512   ECM-receptor interaction lmix04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:lmix00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     132992842   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     132992842  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     132992842    04148 Efferocytosis     132992842   09143 Cell growth and death    04115 p53 signaling pathway     132992842   09144 Cellular community - eukaryotes    04510 Focal adhesion     132992842   09142 Cell motility    04820 Cytoskeleton in muscle cells     132992842  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:lmix04131]     132992842   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:lmix00536]     132992842 Membrane trafficking [BR:lmix04131]  Endocytosis   Phagocytosis    Opsonins     132992842 Glycosaminoglycan binding proteins [BR:lmix00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    132992842 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd EGF_3 TSP1_CFP_C TSP1_ADAMTS cEGF Laminin_G_3 EGF TSP1_CCN Motif Other DBs NCBI-GeneID:  132992842 NCBI-ProteinID:  XP_060918353 LinkDB All DBs Position 18:11955976..11964917 Genome browser AA seq 1172 aa AA seqDB search MMLCGIVLLLMLWSCESARLAESRDDNSVYDLFDLARVNKRHHGVSLVKGADPYSPAYKV LNADLIPPVPDSSLRDLLDSIQTERGFLLLVNLKQFKKTRGSLLTIEKNDGSGPIFEIIS NGKANTLDVFFSTSDQQQLVSIEDADLASGHWKNITLFVQDDRVQLYVGCEEINVSELDV PIQRVLSQEVADIARLRIGKGATKDKFMGVLQNVRFVFGTTLDAILRNKGCQSGAALTDV MTLDNPVNGSSPAIRTDYTGHKTKDLQSVCGFSCEDLAGMFKELKGLGVVVKQLSNELRK VSEDSTLLKNQMNVYNGICIHNGIVHNDQDEWTVDGCTECTCQNSATVCRKISCPLIPCA NATVPDGECCPRCGTPSDYAEDGWSPWSEWTPCSVTCGRGIQQRGRSCDRINSNCEGTSV QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGMDCQGQG RQTEICQKSSCPINGGWGPWSPWDSCTVTCGGGIQTRTRLCSDPVPKYGGKDCVGDANVS QVCNKQDCPIDGCLSSPCFLGTRCTSFPDGSFRCGKCPLGYTGNGITCKDIDECTEVLDA CHTHNGVHRCENTEPGYNCLPCPARFSGPQPFGRGVEQATAKKQVCKPRNPCQDGSHDCH KNANCIYLGVYSESMFRCECKPGYAGNGRICGEDTDLDGWPNTNLVCVENATYHCKKDNC PNLPNSGQEDHDKDGLGDECDNDDDNDRIPDDRDNCPRVYNPAQYDTDRDDVGDRCDNCV FEANADQTDTDNNGEGDACAVDIDGDGILNANDNCPYVYNVDQRDTDRDGVGDHCDNCPL EHNPDQVDSDSDLIGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDDKDNCRLAFNPDQVDSDGDGRGDVCKDDFDQDNVLDIYDVCPENFAISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFSAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYTVMWKQVTQTYWSHTPTRAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGDTAGQVRTLWHDPKNIGWKDFTAYRWHLIHRPKTGLIRVVMYEGKRIMADSGNI FDKTYAGGRLGLYVFSQEMVYFSDLKYECRDT NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgatgctgtgtggcatcgttttgctgttgatgctttggagttgtgagagcgcgaggttg gcagagagtcgggatgataacagtgtgtatgacttattcgatctggcccgggtaaacaag agacatcatggagtgagtctggtcaaaggcgcagatccttacagccctgcatacaaagtc ctgaacgcagacctgatccccccggtccccgacagctccctccgggacctccttgactct atccagactgagaggggctttctcctcctcgtcaacctgaagcagttcaagaaaaccagg ggcagccttttgaccatcgagaaaaatgacggatctggaccaattttcgagataatttcc aacgggaaggcgaacactctggatgtcttcttctccacctcggaccagcagcagctggtg tccattgaggatgcggatctggcctcagggcactggaagaacatcactttgttcgttcag gacgaccgagtgcaactttatgtcggctgtgaggagatcaatgtgtctgagcttgatgtg ccaatccaaagagtgctgtctcaggaggtggctgacattgccaggctcaggattggaaaa ggagcaacaaaggacaaattcatgggggttcttcaaaatgtgcgctttgtatttgggaca acccttgatgccatactgagaaataagggatgccagagtggagctgccttaactgatgtc atgacccttgacaacccagtcaatggctccagtcctgccattaggactgattacaccggc cacaaaaccaaagatctgcagtctgtctgcggcttctcttgtgaggacctcgccggcatg tttaaagagctcaagggactcggtgtggttgttaaacagctgtccaatgagctgcgcaaa gtgtctgaggacagtactctgctgaaaaatcaaatgaatgtctacaatggcatctgcatt cacaacggcatagtgcacaatgaccaagatgagtggaccgtggacggctgcaccgagtgc acctgccaaaactctgctactgtgtgtcgcaaaatctcctgccctctgatcccgtgtgct aatgccaccgtgcctgatggagaatgctgccctcgctgtggaacaccaagtgattatgca gaggatggctggtccccttggtctgaatggaccccttgttctgtgacatgtggtcgtggc atccagcagcgtggacgttcttgtgaccgcatcaacagcaactgtgagggcacctctgtc cagacccgtgactgctacccccaggaatgtgacaaacgcttcaaacaggatggtggttgg agccactggtctccatggtcttcatgctctgtgacctgcggtgagggggtcatcacccgg atacgcctctgcaactctccaacaccccaaatgggtggtatggactgccaaggacaggga cgtcaaactgaaatctgccaaaagtcgtcttgtcctatcaatggaggttggggaccctgg tcaccctgggacagctgcactgttacctgtggtggtggaatccagacccgcacacgtctc tgttcagaccctgttcccaaatatggaggaaaagattgtgttggtgatgcaaatgtgtct caagtgtgcaacaagcaggactgccctattgatggttgtctctccagcccatgcttcctt ggcacaagatgcacaagcttcccagatggctctttcaggtgtggcaagtgtccacttgga tacactggaaatggcatcacttgcaaagacattgatgagtgcacagaggtccttgatgct tgccatacgcacaatggagtccatcgttgtgagaacacagagcccggttacaattgtttg ccctgccctgcgcgattctccggccctcagccttttggcagaggagtggaacaggcaact gctaaaaaacaggtttgtaaaccccgtaacccttgccaggatggtagccacgactgccat aagaatgcaaactgtatctacttgggcgtctactctgagtccatgttccgctgtgagtgc aagccaggttatgctgggaatggccgtatttgcggagaggacactgatcttgacggatgg ccaaacactaacctggtgtgtgtggagaacgccacctaccactgcaaaaaggataactgc cccaaccttcccaactctggccaggaagaccatgacaaagatggcctgggtgatgaatgt gacaatgatgatgacaatgatcggatccccgatgatagggacaactgcccaagagtgtac aaccctgcccagtatgacacagacagggatgatgttggcgaccgctgtgataactgtgtg tttgaggcgaacgcagaccaaactgacactgacaacaatggagagggagatgcctgtgct gtggacattgatggggatggcattctgaacgcaaacgacaactgcccatatgtttacaat gtggaccagagggacactgacagggatggtgtgggcgaccattgtgacaactgccctctg gagcacaaccctgatcaggttgactcagactcagatctcattggagacaagtgtgacaac aaccaggacattgacgaggacggtcaccagaacaacttggacaattgcccttacatcccc aacgccaaccaggctgaccatgacaaagatggcaagggtgacgcctgtgaccatgatgat gacaacgacggcattcctgacgacaaagacaactgtagactggcctttaacccagatcaa gtggactctgatggtgatggccgtggtgatgtgtgcaaagacgattttgaccaagacaac gttcttgacatctatgatgtgtgtcccgagaactttgccatcagtgaaacagacttccgc agattccaaatggttcctctggaccccaagggcacctcccaaattgaccccaactgggtg gtgaggcatcagggcaaggagttggtacagactgtcaactgtgatccgggcattgctgtt ggttatgatgagttcagcgcagtcgatttcagtgggacattcttcatcaacacggacaga gatgacgactatgccggatttgtgtttggctaccagtccagctcacgcttctacacagtc atgtggaaacaagtcacacaaacctactggtctcacacacccacaagagctcagggctac tctggcctgtcaatcaaagtggtcaactccaccactgggcctggcgagcacctgagaaat gccctgtggcacaccggagacacagcaggacaggtacgcactctgtggcatgaccctaag aacattggctggaaggactttactgcctacagatggcatctaatccacagacctaagact ggactgattagagtggtcatgtatgaaggcaagagaatcatggccgattctggaaacatc tttgacaaaacatatgcaggtggacgacttggcttgtacgtcttctctcaggagatggtt tacttctcagacctcaaatatgaatgcagagatacataa

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