Labrus mixtus (cuckoo wrasse): 132993012
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Entry
132993012 CDS
T10666
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04140
Autophagy - animal
Brite
Membrane trafficking [BR:
lmix04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
132993012 (c9orf72)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
DUF7645
Motif
Other DBs
NCBI-GeneID:
132993012
NCBI-ProteinID:
XP_060918625
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Position
18:complement(578683..591753)
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AA seq
462 aa
AA seq
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MSSGCPPQSPAVAKSEVVVDGECPLLAATFAYWDNILGPRVRHIWTPKGDQLMFLSDGEV
TFLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQT
ELAFYLPLHTICVERLKHVIRRGRIWMQKGYNIISVLSLEIVPIMELLASMKTHSVPEEI
DIKDTVLNDDDIGDSCHEDFLHKSISSHLQTCGCSIVVGSNPEKVNKIVRTLCLFLTPAE
RKCSRLCKADSSFKYDTGLFVQGLLKDSTGSFVLPFRQVLYSPYPTTHIDVDINTVKQMP
PCHEHTYNQRRYMRSELSTLWKADSEEDIAPDTVIYTDESFTPDLNIFQDVMHKDTLVKS
FIDEVFMLKPGLSLRSTYLAQFLLLLHRKALTLLKYIEDETQKGKKPFRSLRNLKTDLDL
TIEGDLNIVMAFSEKLRAGLHSFVFGKPFFTSMQERDVLMSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctggctgtccaccccagtcccccgctgtggcaaagtctgaggtagtagtagac
ggagaatgccctctcctggctgccacctttgcctactgggacaacatcctgggtccacgg
gtgcgccacatctggacaccaaagggtgaccaattgatgttcctcagcgacggagaggtc
acatttttggccaatcatacactcaacggagagattctgcgtagtgccgagtgtggtgct
gtggatgtgaagttctttgtcctggcagaaaagggggtcatcattgtgtctctcatcttt
gacggtgagctgaagggggacaagaacacatgcgccttgtccattatcctgcctcagacg
gagctggccttctacctgcctctgcacacaatttgcgtggagaggctaaagcatgttatc
cgcaggggacgcatttggatgcagaagggctacaacatcatctcagttctgagcttggag
attgtccctatcatggagctgttggcctctatgaagacgcacagcgtgccagaagaaata
gatataaaagacaccgtgctaaatgatgatgacatcggggacagctgccacgaggacttc
ctccacaagtccatcagctctcatctgcagacttgcggctgttcaatagtggtcggaagc
aacccagagaaagttaataagattgtgcggactctctgccttttcctcaccccagctgag
aggaagtgctctcgcctctgcaaggccgactcttccttcaaatatgacacaggcctgttc
gtgcagggtctgctcaaggactccacaggcagtttcgtcctgccgttccgccaggttctc
tactccccctatccgaccacacacatcgatgtcgacatcaacacagtcaagcagatgcca
ccgtgccacgagcacacgtacaaccagcggcgctacatgcggtctgagctcagcacacta
tggaaggcggacagcgaggaggacatagcccccgacacagttatttacacggacgaatcc
ttcacccctgacctgaatatatttcaagacgtcatgcataaagacactttagtaaagtca
ttcatagatgaggtgttcatgctgaagccaggcctgtccctgcggagtacctatctggcc
cagttcctgctgctgctccacaggaaggccctcacgctgctcaagtacattgaggacgaa
acgcaaaaagggaagaagccgtttcgatcgttgcgcaatttaaagactgacctggatctg
accatcgaaggagacctgaacattgttatggccttctctgagaagctgagggcaggactt
cactcgtttgtttttgggaagccgttcttcaccagcatgcaggaacgagatgtactcatg
agcttttga
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