Labrus mixtus (cuckoo wrasse): 132993650
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Entry
132993650 CDS
T10666
Symbol
traf6
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04010
MAPK signaling pathway
lmix04120
Ubiquitin mediated proteolysis
lmix04140
Autophagy - animal
lmix04144
Endocytosis
lmix04620
Toll-like receptor signaling pathway
lmix04621
NOD-like receptor signaling pathway
lmix04622
RIG-I-like receptor signaling pathway
lmix05132
Salmonella infection
lmix05168
Herpes simplex virus 1 infection
Brite
Enzymes [BR:
lmix01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132993650 (traf6)
Membrane trafficking [BR:
lmix04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
132993650 (traf6)
Ubiquitin system [BR:
lmix04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
132993650 (traf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132993650
NCBI-ProteinID:
XP_060919610
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Position
1:10918284..11318333
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AA seq
592 aa
AA seq
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MMDDVCKVKQEIIWKRKVGDVLKAKMACFDSNKGSLEEVSYDGAVGGEVSSCALAMMEKE
RESLLSPSESPGTFISSNSTSLQAADPVQGYDVEFDPPLESKYECPICLMALRNAIQTPC
GHRFCKNCIEKSIRDTGQRCPVDNEALSEEQLFPDNFAKREILSLTVRCPNSDCADKMEL
RHLENHLAHCQFATEPCPQCQQSVRKSHLEEHKTVECQRRPVSCPDCVASFVYEERELHE
QQCPFANVKCQYCGMDLIRDQMESHCDTDCPKAPIACNFSAFGCKERMQRHNLAQHMQEF
TQMHMRFMADFLRGVTLNGTSPKSLWPLGPSVSPEDQGAAASVSACSGPRGAASCSSNSA
PSQPSEEMQRIRDMDGRLVKQDHQLRELIILKETQAGQLAELRRRVSVLEETVKELEAHQ
CHGIFIWRLKGFSTHLRNQETGQAVVEHSPGFYTGRPGYKLCLRLHLQTPNAPRCSNFIS
LFVHTMQGAYDGQLTWPFQGTIRLAILDQGPEGQHHTEVMETKPDLQAFQKPTIHRNPKG
FGYVTFLHLHQLNQRAFIKDDTLLIRCEVTPRFDNIHREGPAVQPRGPEASV
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgacgtttgtaaagtaaaacaggaaattatctggaaacgaaaagtaggagac
gttttgaaagcgaagatggcttgctttgacagtaataagggaagtttggaggaggtcagc
tatgacggagctgttggtggagaggtgtccagctgcgcgttggcaatgatggaaaaagaa
cgtgagtcccttcttagcccttcggagagcccgggcacgtttatcagcagcaactccact
agtcttcaggctgctgaccccgtccagggctacgacgtggagtttgacccgcccctagag
agtaaatatgagtgccctatctgcctcatggctttgaggaatgccattcaaacaccctgt
ggtcaccgattctgcaagaactgcattgagaagtccattcgcgatacgggacagaggtgc
cctgttgacaatgaagcgttgtcagaagaacagctgtttcctgataactttgccaaacgg
gagatcctatcgctaactgtgcgctgtcccaactctgactgtgctgacaaaatggagctc
agacatttagagaatcatttggcgcattgtcagtttgccactgagccgtgcccacagtgc
cagcagtctgtgagaaagagccacctagaggagcacaaaactgttgagtgccaaaggaga
cctgtgtcctgtccagattgtgttgcaagctttgtttacgaggagagagagcttcatgaa
cagcagtgtccctttgccaatgtgaagtgtcagtactgtgggatggatctgatcagagac
cagatggaatctcattgtgacacagattgtcccaaagcacccatcgcctgtaacttcagc
gcctttggatgtaaggagcggatgcagcgccacaacctggcccagcacatgcaggagttc
acgcagatgcatatgcgcttcatggccgacttcctccgaggcgtcaccctcaatggtacc
tctcctaaatccctgtggccgctaggaccttccgtgtcccccgaggatcaaggagctgca
gcatcagtgtcggcctgtagtggtccaagaggcgctgcgagctgcagcagcaacagcgcc
ccaagtcagcctagcgaggagatgcagaggatcagggacatggacggacgactggtgaag
caggaccaccagctgcgtgagctcattatcttaaaagaaacacaggccggccagttagca
gagctcagacgcagagtgtcagtgctggaggagacggtgaaggagctggaagcccaccag
tgtcatggcatcttcatttggcgtctcaaaggtttctccacccacctgcgtaaccaagag
accggccaggcggtggtggagcacagccccggcttctacacgggccgcccaggctacaag
ctgtgcctgcgactacacctgcagacccccaacgccccacgctgctccaattttatctcg
ctctttgtccacaccatgcaaggagcttatgacgggcagctgacctggccttttcagggc
accatccgccttgccatcctggaccagggccctgagggtcagcaccacacggaggtgatg
gaaaccaaaccagacctgcaagccttccagaagcccaccatccatcgtaaccccaaaggc
tttggctacgtcacctttttgcacctgcatcagctgaatcagagagcctttatcaaagat
gatactttacttatccgctgtgaggtgacaccgcgttttgacaatattcaccgcgaggga
ccagcggtgcagccgagaggccctgaggcctcagtgtga
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