Listeria monocytogenes La111 (serotype 1/2a): BN418_2110
Help
Entry
BN418_2110 CDS
T02512
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
lmoe
Listeria monocytogenes La111 (serotype 1/2a)
Pathway
lmoe03030
DNA replication
lmoe03410
Base excision repair
lmoe03420
Nucleotide excision repair
lmoe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lmoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN418_2110
03410 Base excision repair
BN418_2110
03420 Nucleotide excision repair
BN418_2110
03430 Mismatch repair
BN418_2110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmoe03032
]
BN418_2110
03400 DNA repair and recombination proteins [BR:
lmoe03400
]
BN418_2110
Enzymes [BR:
lmoe01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BN418_2110
DNA replication proteins [BR:
lmoe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BN418_2110
DNA repair and recombination proteins [BR:
lmoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BN418_2110
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN418_2110
MMR (mismatch excision repair)
DNA ligase
BN418_2110
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BN418_2110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH
BRCT_2
RNA_pol_A_CTD
DUF7201
Motif
Other DBs
NCBI-ProteinID:
CCQ21263
LinkDB
All DBs
Position
complement(1710292..1712310)
Genome browser
AA seq
672 aa
AA seq
DB search
MMADKKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLKIEEAHPEWVTPESPSK
RVGGEVLEGFKKVAHDTPMLSLANAFNHEDLADFDRRIRDKVGDDIAYMCELKIDGLAVS
LQYENGKYKQGATRGDGTIGEDITANLRTIRSIPMKLQKDYSIEVRGEAFMPKRSFQKLN
EIREEEGQMLFANPRNAAAGSLRQLDTKIAASRNLDIFLYAVADFGEMGVETHSAGLDML
ETLGLKVNKERRLCSSLEEVYAYIDEWTEKRADLAYDIDGIVLKLNNLEQQRQMGTTVKS
PRWSIAYKFPAEEVPTKLLDIELNVGRTGVITPTAVLEPVRVAGTTVSRASLHNEDLITE
KDIRIGDTVLIKKAGDIIPEVIKSITEERSGSEEPFHMPKNCPTCDSELIRLEEEVALRC
INPKCPAQIKEGLIHFVSRNAMNIDGLGEKVIIQLFSQHLIKDVADLFFLSKEKLLELER
MGEKSVTNLLASIEASKQNSLEKLLFGLGIRHVGAKAAKSLAVHFETMDNLKVADKETLT
NINDIGEKMADSIVTYFANEEVHDLLEELKRAGVNMTYTGPKLEDMSEEELVFAGKTVVL
TGKLEKLTRNDAKALIESLGGNVSGSVSKKTDVVVAGSDAGSKLAKAEELAIPIWSEEDL
IEYLPDEGGLNE
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgataaaaaacggtatgaagaactaatcaacatacttgatcaatacagctat
gattattatgtaattgataatccaacagtagaagatgccgaatatgatcagaagatgcaa
gaattacttaaaatagaagaagcgcatcccgagtgggttacacctgagtcaccgtcgaaa
cgagttggcggagaagttttagaaggtttcaaaaaagtggcacatgacaccccaatgtta
agtcttgccaacgcttttaaccatgaagatttggcggattttgaccgccgaattcgcgac
aaagtgggcgatgatattgcttatatgtgcgaacttaaaattgacggactagcagtatcc
cttcaatacgaaaatggtaaatacaaacaaggtgctacccgcggtgatggaaccattggg
gaagacattactgctaacttgcgtacgattcgctccattccgatgaaacttcaaaaggat
tattccattgaagttcgtggtgaagctttcatgccgaaacgctctttccaaaaactaaat
gaaattcgcgaagaagaaggccagatgttatttgctaatccgcgaaatgctgcggctggc
tcacttcgacaattagacacaaaaattgcagcgtcaagaaatctcgatatcttcctgtat
gcagtagctgatttcggtgaaatgggcgttgaaacacatagcgccggtttagatatgctt
gaaacacttggtcttaaagtcaataaagagcgccggctttgcagtagtttagaagaagta
tatgcttacattgacgaatggacagaaaaacgcgccgacttagcatatgatattgatggc
attgttctaaaattaaacaacttagaacaacaacgccaaatgggaaccaccgttaaatca
cctcgttggtcgattgcttataaatttccagccgaagaagtaccaactaagttactcgac
attgaattaaatgtaggtagaacaggtgtaataactcccaccgccgtgttagaaccagtg
agagtggcagggacaaccgttagccgtgcttcccttcataatgaagatttaattacggaa
aaagatatccgcattggcgacactgttttaatcaaaaaagctggcgatatcattccagaa
gttattaaaagcatcaccgaagaacgtagcggaagtgaagaaccattccatatgccaaaa
aattgtccgacatgcgacagtgaactgattcgtttggaagaagaagtggcgctaagatgc
attaatcctaagtgcccagctcaaataaaagaaggtcttatccactttgtttccaggaat
gcgatgaatattgacggacttggcgaaaaagtaattattcagttgttttcacagcattta
attaaagatgtagcagatttgtttttcctttcgaaggagaaactgttagaattagaaaga
atgggtgagaaatcagtaactaatttactggcatccatcgaagcaagtaaacaaaactcg
cttgaaaaactactttttggcttaggaattcgccatgttggtgctaaagctgccaaatca
cttgccgttcatttcgaaacaatggataatttaaaagttgcggacaaagaaacactgacg
aatattaacgacattggtgaaaaaatggcagacagtattgtgacctattttgcgaatgaa
gaagtacatgatttattagaagaactaaaaagggctggcgtcaatatgacctatacaggg
ccaaaactagaagatatgtccgaggaagaacttgttttcgcaggtaaaaccgttgtctta
actgggaaactagagaagttaacacgaaatgatgcaaaagcactaatcgaatccctcgga
gggaatgtttctgggagcgtcagtaagaaaacagatgttgttgtagctggcagtgatgct
ggttctaaactagccaaagctgaagaactagccattcctatttggtcagaagaagactta
atagagtacttaccagacgaaggtggattaaacgaatga
DBGET
integrated database retrieval system
