Listeria monocytogenes WSLC1001 (serotype 1/2a): AX10_03000
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Entry
AX10_03000 CDS
T03114
Name
(GenBank) DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
lmow
Listeria monocytogenes WSLC1001 (serotype 1/2a)
Pathway
lmow03030
DNA replication
lmow03410
Base excision repair
lmow03420
Nucleotide excision repair
lmow03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lmow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AX10_03000
03410 Base excision repair
AX10_03000
03420 Nucleotide excision repair
AX10_03000
03430 Mismatch repair
AX10_03000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmow03032
]
AX10_03000
03400 DNA repair and recombination proteins [BR:
lmow03400
]
AX10_03000
Enzymes [BR:
lmow01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
AX10_03000
DNA replication proteins [BR:
lmow03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AX10_03000
DNA repair and recombination proteins [BR:
lmow03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
AX10_03000
NER (nucleotide excision repair)
GGR (global genome repair) factors
AX10_03000
MMR (mismatch excision repair)
DNA ligase
AX10_03000
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AX10_03000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH
BRCT_2
RNA_pol_A_CTD
DUF7201
Motif
Other DBs
NCBI-ProteinID:
AHJ03467
LinkDB
All DBs
Position
complement(595486..597510)
Genome browser
AA seq
674 aa
AA seq
DB search
MKMMADKKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLKIEEAHPEWVTPESP
SKRVGGEVLEGFKKVAHDTPMLSLANAFNHEDLADFDRRIRDKVGDDIAYMCELKIDGLA
VSLQYENGKYKQGATRGDGTIGEDITANLRTIRSIPMKLQKDYSIEVRGEAFMPKRSFQK
LNEIREEEGQMLFANPRNAAAGSLRQLDTKIAASRNLDIFLYAVADFGEMGVETHSAGLD
MLETLGLKVNKERRLCSSLEEVYAYIDEWTEKRADLAYDIDGIVLKLNNLEQQRQMGTTV
KSPRWSIAYKFPAEEVPTKLLDIELNVGRTGVITPTAVLEPVRVAGTTVSRASLHNEDLI
TEKDIRIGDTVLIKKAGDIIPEVIKSITEERSGSEEPFHMPKNCPTCDSELVRLEEEVAL
RCINPKCPAQIKEGLIHFVSRNAMNIDGLGEKAIIQLFSQHLIKDVADLFFLSKEKLLEL
ERMGEKSVTNLLASIEASKQNSLEKLLFGLGIRHVGAKAAKSLAVHFETMDNLKVADKET
LTNINDIGEKMADSIVTYFANEEVHDLLEELKRAGVNMTYTGPKLEDMSEEELVFAGKTV
VLTGKLEKLTRNDAKALIESLGGNVSGSVSKKTDVVVAGSDAGSKLAKAEELAIPIWSEE
DLIEYLPDEGGLNE
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatgatggctgataaaaaacggtatgaagaactaatcaacatacttgatcaatac
agctatgattattatgtaattgataatccaacagtagaagatgccgaatatgatcagaag
atgcaagaattacttaaaatagaagaagcgcatcccgagtgggttacacctgagtcaccg
tcgaaacgagttggcggagaagttttagaaggtttcaaaaaagtagcacatgacacccca
atgttaagtcttgccaacgcttttaaccatgaagatttggcggattttgaccgccgaatt
cgcgacaaagtgggcgatgatattgcttatatgtgcgaacttaaaattgacggactagca
gtatcccttcaatacgaaaatggtaaatacaaacaaggtgctacccgcggtgatggaacc
attggagaagacattaccgctaacttgcgcacgattcgttccattccgatgaaacttcaa
aaggattattccattgaagttcgtggtgaagctttcatgccgaaacgctctttccaaaaa
ctaaatgaaattcgcgaagaagaaggccagatgttatttgctaatccgcgaaatgctgcg
gctggatcacttcgacaattagacacaaaaattgcagcgtcaagaaatctcgatatcttc
ttgtatgcagtagctgatttcggtgaaatgggcgttgaaacacatagcgccggtttagat
atgcttgaaacacttggtcttaaagtcaataaagagcgccggctttgcagtagtttagaa
gaagtatatgcttacattgacgaatggacagaaaaacgcgccgacttagcatatgatatt
gatggcattgttctaaaattaaacaacttagaacaacaacgccaaatgggaaccaccgtt
aaatcacctcgttggtcgattgcttataaatttccagccgaagaagtaccaactaagtta
cttgacattgaattaaatgtaggtagaacaggtgtaataactcccaccgccgtgttagaa
ccagtgagagtggcagggacaaccgttagccgtgcttcccttcataatgaagatttaatt
acggaaaaagatatccgcattggcgacactgttttaatcaaaaaagctggcgatatcatt
ccagaagttattaaaagcatcaccgaagaacgtagcggaagtgaagaaccattccatatg
ccaaaaaattgtccgacatgcgacagtgaactggttcgtttggaagaagaagtggcgcta
agatgcattaatcctaagtgcccagctcaaataaaagaaggtcttatccactttgtttcc
aggaatgcgatgaatattgacggacttggtgaaaaagcaattatccagttgttttcacag
catttaattaaagatgtagcagatttgtttttcctttcgaaggagaaactgttagaatta
gaaagaatgggtgagaaatcagtaactaatttactggcatccatcgaagcaagtaaacaa
aactcgcttgaaaaactactttttggcttaggaattcgccatgttggtgctaaagctgcc
aaatcacttgccgttcatttcgaaacaatggataatttaaaagttgcggacaaagaaaca
ctgacgaatattaacgacattggtgaaaaaatggcagacagtattgtgacctattttgcg
aatgaagaagtacatgatttattagaagaactaaaaagggctggcgtcaatatgacctat
acagggccaaaactagaagatatgtccgaggaagaacttgttttcgcaggtaaaaccgtt
gtcttaactgggaaactagagaagttaacacgaaatgatgcaaaagcactaatcgaatcc
ctcggaggaaatgtttctggaagcgtcagtaagaaaacggatgttgttgtagctggcagt
gatgctggttctaaactagccaaagctgaagaactagccattcctatttggtcagaagaa
gacttaatagagtacttaccagacgaaggtggattaaacgaatga
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