Lagopus muta (rock ptarmigan): 125684202
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Entry
125684202 CDS
T09141
Symbol
AP4B1
Name
(RefSeq) AP-4 complex subunit beta-1 isoform X1
KO
K12401
AP-4 complex subunit beta-1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
125684202 (AP4B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125684202 (AP4B1)
Membrane trafficking [BR:
lmut04131
]
Endosome - Golgi transport
Others
AP-4 complex
125684202 (AP4B1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
PDS5
AP5B1_middle
Motif
Other DBs
NCBI-GeneID:
125684202
NCBI-ProteinID:
XP_048782124
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Position
24:complement(3763244..3770776)
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AA seq
740 aa
AA seq
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MPYLGGEEVLRDLRRALSNPHVQAEPLRYRAAVLRVIRLMTQGADVSGLFAEMVKAGAAA
DVVQKKLVQLYVCAHAPRMPRLALLAVNTLRRDCADPSPAVRGLALRGLCDLRLPGMQEY
VQQPLLNGLRDRASYVRRIAVLGCAKVHRLQGDTEVDGALVNELYSLLRDQDPIVVVNCL
RALEEILKKEGGVVINKPIAHHLLNRMADLDQWGQSEVLAFLLRYRPRTEEELFNILNLL
DGYLKSSSPSVVMAATKLFLVLAKEYPHVQADVLVRVKGPLLAACTSESRELCFTALCHV
RQILGSLPGHFSSHYKKFFCSYSEPHYIKCQKMEVLCELVNDENVQQVLEELKGYCTDIS
VELAQGAISAIGSIARTYTEQCVGILTELLGLQQEHITSAVVQAFRDLVWLCPQCTDAVC
QALPGCEDIIQDSEGKQALIWLLGAHGEKVPNAPYVLEDLVENVKTEVFPAVKMELLTAL
VRLFLSRPAECQDMLGRLLYHCIEEEKDMSVRDRGLFYYRLLQSGVDEVKRVLCSPKSDP
SLGLLEDQTEQPVNTWASEFNTLAPIYGKARWALVTAHQPGEPCYAFSPCTDSGNGGTES
LISEGSKEVLKVHPDTGSLTLIPDVALTAEQFEKTWLSLDVGCQQSLPWIGTVHPDTIQT
ALHVVHIRTIAMSKAGVQPWKAYFIAQDDSGCLFLTELLLEAEDSGMQVAVKQSEAKPEA
LQAFMSVFRTAVEAVAGLRS
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacctgggaggcgaggaggtgctgcgcgatttgcgacgcgcgctgagcaacccg
cacgtgcaggcggagccgctgcggtaccgcgccgccgtgctgcgagtcatccggctcatg
acgcagggcgcggacgtgtcggggttgtttgcggagatggtgaaggcgggtgcggcggcc
gacgtggtgcagaagaagttggtgcagctgtacgtgtgcgcgcacgccccgcgcatgccc
cgcttggcgttgctggctgtcaacacgctgcgacgggactgcgccgatcccagccctgcc
gtgcgcggcctggcgctgcgaggactctgcgacctcaggttgcccggcatgcaggaatat
gtgcagcagcccctcctgaatggcctgcgggacagagcctcctacgtgcgcaggattgct
gtgctgggctgtgccaaggtgcacaggctgcaaggagacaccgaagtggacggtgcattg
gtgaatgagttgtacagcctgcttcgtgaccaggaccctatcgtggtggtgaactgtctg
agggctttggaagagatcttgaagaaagagggaggagttgtcatcaacaaacctattgcc
catcatctcctcaacaggatggctgacctggatcagtgggggcaaagcgaggtgcttgcc
ttccttctgcgttacagaccccgcactgaggaggagctgttcaacattctcaatttgctg
gatgggtatctgaaaagcagcagccccagcgttgtgatggcagccaccaagctcttcctc
gtgctggccaaggagtacccacacgtgcaggcagatgttttggtgagggtgaaggggcca
ctgctggctgcctgcacctcggagagcagggagctgtgcttcactgcgctgtgccacgtg
cgtcagatcctcgggagtcttcctggccattttagcagccactacaagaagttcttctgc
tcgtattcagaaccccattacatcaaatgccagaagatggaagtgttgtgtgagctggtg
aatgatgagaatgtgcaacaagtgctggaagagctgaagggctattgcactgatatatca
gtggagctggcccagggggcgatctctgccataggcagtattgctaggacatacacagag
cagtgcgtggggattctgacagagctcttggggcttcaacaggagcacatcacgtcagct
gtagtacaggcttttcgggacctggtttggctgtgtccccagtgcacagatgcagtgtgt
caggcactgcctggctgtgaggacatcatccaggacagtgaggggaagcaagcactgatc
tggctccttggtgcacatggtgagaaagtaccaaacgccccctatgtgttagaggacttg
gtggagaatgtgaaaacagaggtgttcccagcagtgaagatggagctcctgacagcgttg
gtgcgacttttcctgtctcgtcctgctgagtgtcaggacatgctggggaggctgctctat
cactgcatagaggaggagaaagatatgtcagtacgagaccgtgggctgttctactatcgc
ctcttacagtccggtgtggatgaagtgaaacgggttctgtgcagccccaagtcagaccct
tccctagggctcctggaggaccaaacagaacaacctgtgaatacgtgggcatctgagttc
aacacccttgcacctatttatggcaaagcacgttgggcacttgtcactgctcaccagcca
ggggagccctgttacgctttttctccttgtacagactctgggaacgggggcacagagtca
ctgatttctgaagggagtaaggaagtccttaaggttcatcctgatacaggcagccttacc
ttaattcctgatgtcgccctgactgcagaacagtttgagaagacctggctgagcctggat
gttggctgccagcagtctctgccctggattggaacagttcatccagatactatccagact
gctcttcatgtcgtccacatccggaccattgctatgagcaaagctggtgtccagccatgg
aaagcttatttcattgctcaggatgacagtggttgcctcttcctgacagagctattgctc
gaggcagaagattcagggatgcaggttgcagtgaagcagagtgaggcaaagcctgaggca
ctgcaggccttcatgtctgtgttcaggactgctgtggaggcagttgctgggctcagatcc
tga
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