Lagopus muta (rock ptarmigan): 125685233
Help
Entry
125685233 CDS
T09141
Symbol
PTPN6
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type 6 isoform X1
KO
K05697
tyrosine-protein phosphatase non-receptor type 6 [EC:
3.1.3.48
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04148
Efferocytosis
lmut04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125685233 (PTPN6)
09144 Cellular community - eukaryotes
04520 Adherens junction
125685233 (PTPN6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lmut01009
]
125685233 (PTPN6)
Enzymes [BR:
lmut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
125685233 (PTPN6)
Protein phosphatases and associated proteins [BR:
lmut01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Non-receptor PTPs
125685233 (PTPN6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
SH2
PTP-SAK
DSPc
Tc-R-P
SH2_1
Y_phosphatase3
DUF4941
PTP-NADK
PTPlike_phytase
HGAL
Motif
Other DBs
NCBI-GeneID:
125685233
NCBI-ProteinID:
XP_048784107
LinkDB
All DBs
Position
1:77440884..77460058
Genome browser
AA seq
606 aa
AA seq
DB search
MPSCGWFHRDLSGLEAEALLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNTG
DFYDLYGGEKFATLSELVEYYTQQQGSLQDKDGTIIDLRYPLNCSDPTTERWYHGHLSGA
AAESLLQAKATPWTFLVRESLSKPGDFVLSVLTDQPKPGSDAPPAGATSASGARLKVTHI
KIMCENGRYTVGGTEKFDSLADLVEHFKKTGIEEVSGSFVYLKQPYYATRVNAADIENRV
HELNKKSLSEETSKAGFWEEFDSLQKQEAKQLFDRHEGQRPENKSKNRYKNILPFDHSRV
ILQGRDPNIPGSDYINANYVKNNLISPDECPKTYIASQGCLDTTVNDFWQMVWQENTHII
VMTTREVEKGRNKCVPYWPEAGSTKEYGPYLVENVGEHDALEYKLRHLCVCPINDSEAVR
EIWQYQYLSWPDHGVPSEPGGVLSFLDQINQKQESIPDAGPILVHCSAGIGRTGTIIVID
MIVETISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYMAICQFIETTKKKLEVIQ
SQKNKQSESEYGNITYPPAAKNLHAKVSRKSSKQKETIYENLGKKEEKVRKQLSSEKKLK
SSLKKK
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgccatcctgtgggtggtttcatcgtgacctgagtgggctggaagctgaagccttactg
aagggacgaggtgtccatgggagcttcctagccagacccagtcgaaagaatcaaggggat
ttttccctttctgttagggttggtgatcaggtaacccacatccgtatccagaatactggg
gatttctatgacctatatggaggagagaagtttgccacactttcagaactggtggagtac
tacacgcagcagcagggctcactgcaagataaagatggaaccatcattgacttgcgatat
cctctcaactgctctgatcccactacagagagatggtaccatgggcatctgtcaggtgct
gcagctgaatcacttctccaggccaaggccaccccatggaccttcttggtgcgggagagc
ctcagcaaacctggagattttgtcttgtctgtcctgactgaccaacctaagcctgggtct
gatgctccaccagctggagcaaccagtgcctctggggcccgtctcaaagtcacccacatc
aaaatcatgtgtgagaatggacgttacacagtcggaggtactgaaaagtttgacagcttg
gcagatcttgtggagcatttcaagaagactgggattgaagaggtgtctggctcttttgta
tacttgaagcagccctactatgctacaagggtgaatgctgctgacattgagaatagagtg
catgaactgaacaagaagagtttatccgaggaaacatcaaaggctggattctgggaggaa
tttgatagcctgcaaaaacaggaagccaaacaactatttgaccgtcacgagggccagaga
cctgaaaacaagagcaagaatcgatacaagaacatcttgccttttgatcactctagagtc
atcctccaaggaagggacccaaatatccctggatctgactatatcaatgccaactatgta
aagaacaatctgatcagtccagatgagtgccccaagacctacatcgccagccagggttgt
ctggataccactgtcaatgacttctggcaaatggtgtggcaggagaacacacatattatt
gttatgaccacacgggaggtagaaaaaggacggaataaatgtgtgccctactggccagag
gcaggcagcacaaaagaatatggtccttacctcgtggagaatgttggggagcacgacgca
ttggaatacaaactccggcatctctgtgtgtgtccaataaatgatagtgaggctgtgcgt
gagatctggcagtaccagtacctgagctggcctgatcatggtgttcccagtgagcctgga
ggagtgctgagtttcctcgatcaaataaaccagaagcaggagagcattccagatgcgggg
cctattctggtgcattgcagtgctgggattggccgcactgggactatcatcgtcattgat
atgatagtggaaacaatctccaccaaggggctagactgtgacattgacatccagaagacc
atccagatggtaagggcccaacgctcagggatggtgcagacagaagcccagtacaagttc
atctacatggccatctgccagttcatagagacaacaaagaaaaagctggaggttatccag
tctcagaaaaacaagcaaagtgagtcagagtatgggaacattacctacccccctgcagcg
aagaatttgcatgccaaggtctcacgaaaatcctccaagcagaaggagacaatttatgaa
aatttgggtaaaaaggaagagaaggtacggaaacagttgtcctcggagaagaaactgaaa
agctcactgaagaagaaataa
DBGET
integrated database retrieval system
