KEGG   Lagopus muta (rock ptarmigan): 125685951
Entry
125685951         CDS       T09141                                 
Name
(RefSeq) class II histocompatibility antigen, B-L beta chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut04145  Phagosome
lmut04514  Cell adhesion molecules
lmut04672  Intestinal immune network for IgA production
lmut05164  Influenza A
lmut05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    125685951
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125685951
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    125685951
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    125685951
   05168 Herpes simplex virus 1 infection
    125685951
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lmut04147]
    125685951
Exosome [BR:lmut04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125685951
  Exosomal proteins of epithelial cells
   125685951
  Exosomal proteins of breast milk
   125685951
SSDB
Motif
Pfam: MHC_II_beta C1-set Ig_3 C2-set_2 I-set Ig_2 ig C2-set_3 MHC_I
Other DBs
NCBI-GeneID: 125685951
NCBI-ProteinID: XP_048785449
LinkDB
Position
30:complement(1814461..1816357)
AA seq 294 aa
MPPSPGTPCSGAAARAAGTLHPPPTAAMGSGRVVAAGAVLVALVALGARLAAGTRPSAFF
QWSATVECHFLNGTERMRFLVRHVYNRQQYVHFDSDVGLFVADAVLGEPSARLFNSQPDV
LEKNRAAVEMLCNYNHEIVAPLTLQKREPKVRICALQSGSQPQTDRLACYVTGFYPPEIE
VKWFQNGREETERVVSTDVMQNGDWTYQVLVLLETSPRHGDSYACRVEHTSLRQPISQLW
EPLVDVGRSKLLLGVGGFVVGLVYLALGLFLFLHSKKVSGHPDPTTPGNFSFPQ
NT seq 885 nt   +upstreamnt  +downstreamnt
atgccgcccagcccaggcactccctgctccggagcagcggcgcgggctgccggcaccctt
catcctcctccgacagcagccatggggagcggccgtgtggtggcggccggggccgtgctg
gtggcactggtggcgctgggagcacggctggccgctggcacgcggccctcggcgtttttc
cagtggagcgctacagttgagtgccacttcctcaacggcaccgagcggatgaggttcctg
gtgaggcacgtctacaaccggcagcagtacgtgcacttcgacagcgatgtcggtctcttc
gtggccgacgcggtgctgggagagccttctgctcggctcttcaacagccagccggacgtg
ctggagaagaacagggctgcggtggaaatgctctgcaactacaaccacgagatcgtggcc
cctctgacgctgcagaagagagagcccaaggtgaggatctgtgcgctgcagtcgggctcc
cagccccaaaccgaccggctggcttgctacgtgacgggcttctacccccccgagatcgaa
gtgaagtggttccagaatgggcgggaggagacggagcgcgtcgtgtccacggacgtgatg
cagaacggagactggacctaccaggtgctggtgctgctggagaccagcccacggcacggg
gacagctacgcgtgccgggtggagcacaccagcctgcggcagcccatcagccagctctgg
gagccgctggtggatgtgggcaggagcaagctgctgctgggcgtcgggggctttgtggtg
gggctcgtctacctggcgctggggctcttcctcttcctgcacagtaagaaagtttcaggg
caccccgatccaaccactccaggtaatttctcgttcccccagtga

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