Lagopus muta (rock ptarmigan): 125685977
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Entry
125685977 CDS
T09141
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1b allele 2-like isoform X1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125685977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125685977
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lmut04054
]
125685977
Membrane trafficking [BR:
lmut04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
125685977
Pattern recognition receptors [BR:
lmut04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125685977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
CARD
UPA-FIIND
PYRIN
DUF6349
LOH1CR12
Motif
Other DBs
NCBI-GeneID:
125685977
NCBI-ProteinID:
XP_048785469
LinkDB
All DBs
Position
30:1474128..1487492
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AA seq
680 aa
AA seq
DB search
MASGGRKENAVAELLWYSLEQLEKHALTEFKAELSKIQPKEGYERIELDAVTDLSPAALA
TLLCSHFGQSHCVEVTADVLWAMGWMALANDLLDKLNQGARFVEWSSDLLIQKVYNVDGT
MKELLQEGVLSSEQHDSIVAESTNLNRMQKLYELVPAWDVTAKYCLYDVLMRNNPSIFLQ
YLADTRAESCFDEFTIEEQDISWAGPVTHPGEMEMPDISWAGPVTHPGEMEMPDICLSSS
VICPGGIEEAAISASTDTNWRKLMGNQNLLTPCAPAEHEPPQMESDSGTHSGAKCMACPW
PEDDRAEEVKPEITGGKEGKKEKYRAHFPRAGFFRCAETELKFLVRTATTVEYEYSFWER
HLPDGIPAGWMEAGPVFDIRATLGAVEAVHLPHFLCLAEGNVNTSEMRIGHVVNGNLLLE
KPDAVKPFHAELRDPSFSPMGVILLSAAFPFIPVHSLVPLYRVIRAADITLHLYLIPNNH
GLEKVVDKDEKRRGHSLLVNKPPQTKRPLNFNTWYRVSGPSQAEINPQELKFVYLTSDSR
QLHTEIYNKDLQEGMQLTLMKVAQEGEKECDPLWAAFLRAGDIEPPAASPPLYSAGLHFV
EQHREQLIQRVTSVSTVLDRLYGHVLSNEQYQSIRAVPTMQEQMRLLYSFVPSWDVACKD
LFLDALKATNSHLIQDLQGQ
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggaggcaggaaggagaatgcagtggctgagctcctatggtacagcctggag
caactggagaagcatgctctcacagagttcaaggctgaactcagcaagatccagcctaag
gaggggtacgagcgcatcgagctggacgctgtgacggatctgtcgccagcagcgctcgcc
accttgctgtgcagccactttgggcagtcccactgcgtggaggtgacagcagacgtgctg
tgggccatgggatggatggctctggccaacgatctcctggacaagctgaaccagggggca
aggtttgttgaatggagcagtgacctcctaatccagaaagtctataacgtggatgggacc
atgaaggaactcctccaggaaggtgtgctgagctctgagcagcatgacagcatcgtggca
gagagcaccaacctgaatagaatgcagaagctctatgaactggtgccagcatgggacgtc
acagccaaatattgcctgtatgatgtactgatgagaaataatccctccatcttcttgcaa
tatttagcagataccagggctgaatcatgctttgatgagttcacgatcgaagaacaagat
atctcctgggccggtcctgtgacacatccaggtgagatggaaatgccagatatctcctgg
gccggtcctgtgacacatccaggtgagatggaaatgccagacatctgcctgtccagttct
gtgatctgtccaggtgggatagaagaagcagcaatatctgcgagcacagatacaaattgg
aggaaactgatgggaaatcaaaatctgctcacaccgtgtgcgcctgcagaacatgagcct
ccacagatggagagtgacagcggcacacactcaggtgccaaatgcatggcgtgtccctgg
ccagaggatgacagggcagaagaagtgaagccagagattactggaggcaaagaaggcaag
aaagagaaatacagagctcatttccctcgggccggtttcttccgctgtgctgagacagag
ctcaagttcctggtgaggacggccaccactgttgagtacgagtactccttctgggaacgt
cacctgcctgatgggatccccgctggatggatggaggctggaccggtgttcgacatccgt
gctacgctgggggctgtcgaggccgttcatctccctcatttcctgtgtctcgcagaggga
aatgtgaacacgtctgagatgcgtatcggccatgttgtcaatgggaacctgctcctggag
aagcctgatgcagtgaagccattccatgcagagttgagggaccccagtttctcccccatg
ggagtcatcttgctttctgccgcattccccttcatccccgtgcactcccttgtgccgctc
taccgtgtcatcagggctgccgacatcacccttcacctctacctcatccccaacaaccac
ggcctggaaaaggtggtggacaaggatgagaagagacgaggccattcactcttggtgaac
aaacctccccagaccaaacgaccgctgaactttaacacatggtaccgcgtatctggtcct
tcacaggcagagataaaccctcaagagctgaaatttgtctacctgacatcagacagccgc
cagctccacactgagatctacaacaaagacctgcaggagggaatgcagctcactttgatg
aaggtcgcccaggagggtgaaaaggagtgtgacccactgtgggctgccttcctgagggca
ggggacattgagcctccagctgcctctcctcctttgtactcagcagggctgcattttgtg
gagcagcaccgagagcagctgatccaacgagtgacgtctgtcagcactgtcctggaccgg
ctctacgggcacgtcctgagcaacgagcagtaccagagcatccgagcagtgcccaccatg
caggagcagatgcggctcctctacagcttcgtgcccagctgggacgtcgcctgcaaggat
ctgttcctggacgctctgaaggctaccaacagtcacctcatccaggacctccagggacag
tga
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