Lagopus muta (rock ptarmigan): 125686132
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Entry
125686132 CDS
T09141
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1b allele 2-like isoform X1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125686132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125686132
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lmut04054
]
125686132
Membrane trafficking [BR:
lmut04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
125686132
Pattern recognition receptors [BR:
lmut04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125686132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
CARD
UPA-FIIND
PYRIN
Ribo_biogen_C
LTXXQ
Motif
Other DBs
NCBI-GeneID:
125686132
NCBI-ProteinID:
XP_048785767
LinkDB
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Position
32:complement(952770..959099)
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AA seq
656 aa
AA seq
DB search
MASGGSTENTVTSLLWDTLKFLEKHDFWKFKRELSKFQPREGYERVDLESVAGLSPAALA
TLLYSHYGRSYCVEVTVDVLRAMGQVHQAKRLLDTLQTGARFVEQNKEFIIQRANNVGGT
IEELLQEGVLSSKQHDSIMAESTNQKRMQKLYELVPVWDATAKYCLYNVLRRNNLSLFLQ
YAGDGLTHYSSAFEGWIVNLDAWISNTQASFYGTVSKLREQVGKLFPFTTPAHPEDEPFD
VESSSGRGSSPKCMACSSQEEDGAEEVKPEITGGKDGKKEIYRAHFPRAGFFRCTETKLK
FLVRMATTIEYEYSFWESHLPAGIPSEWMEAGPVFDIRAEPRAVEAIHLPHFLCLSERKL
SMSGMHIGHLVDGNLCLENPDAVTPFHAVLRDPSFSPMGVILLSASFPFIPVHCLVLLYR
VIRAADITLHLYLIPNNHGLEKAVEKDEKRRGHSFLVDKPPHTSQPLKFNTRYRVSSPSE
AEINPQELKFIYLTSGSRQLYTEIYSKDLKEGMQLTLTKVSQESKMEHSPLWATFLRAGD
IEPPVAFSTSLFSDPSLMEHQPSSSVQAQQKGLHFVEQHREQLIQRVTSVSPVLDQLYGR
VLTNEQYQSIRGMPTPQEQMRLLYSFMPSWDVACKDLFLDALKKTNDHLLQDLQGQ
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggaggcagtacagagaacacagtgacaagtctactgtgggacaccctgaag
ttcctggagaagcatgacttctggaaattcaaaagggaactcagcaagttccagcccagg
gaggggtatgagcgcgttgacctggagagtgtggcagggctgtcaccagctgcacttgcc
accctgctgtacagccactacgggaggtcctactgcgtagaggtgacagtggatgtgctg
agagccatgggacaggtgcaccaggccaaacgtctcctggacacgctgcaaacaggcgca
aggtttgttgagcagaacaaagagtttataatccagcgagccaataatgtgggagggact
atcgaggaactcctccaggaaggtgtgctgagctccaagcagcatgatagcatcatggca
gagagtaccaaccagaagagaatgcagaagctctatgaacttgtgccagtgtgggatgcc
acagccaaatattgtctgtacaatgtgctgaggagaaataatctctccctcttcttgcaa
tatgcaggagatggattgacccactactcctcggcatttgaaggctggatagtaaatctg
gatgcctggatatctaatacacaagcttcattctacggcacagtctcaaaactgagagag
caggtgggaaagctgttcccattcacaactcctgcacatccagaagacgagccttttgat
gtggagagcagcagtggcagaggctcaagtcccaaatgcatggcatgctcaagtcaagag
gaggatggggcagaagaagtgaaaccagagattactgggggcaaagatggcaagaaagag
atatacagagctcattttcctcgggctggcttcttccggtgcactgagacaaagctcaag
ttcttagtgaggatggccaccacaattgagtatgagtactccttctgggaaagtcacctg
cctgcaggaatcccctctgaatggatggaggctggacccgtgtttgacatccgtgctgaa
ccacgtgctgttgaggccattcacctcccacacttcctgtgtctctcagagaggaagtta
agcatgtctgggatgcatattggccaccttgtggatgggaacttgtgcctggagaatcct
gatgcagtgacgccattccatgcagtgctgagagaccccagcttctcacctatgggtgtc
atcttgctttcagcctcattccccttcatacctgtgcactgccttgtgctgctctaccgt
gtcatcagggctgcagacatcacccttcatctctacctcatccccaacaatcatggcctg
gagaaggcagtggagaaggatgagaagagacggggccattccttcctggtggacaaacct
cctcacacctcccagccactgaagtttaacacacggtaccgtgtgtccagtccctctgag
gcagagataaacccccaagagctgaaattcatctacctgacttcaggcagccgccagctc
tacaccgagatctacagcaaggacctgaaggagggaatgcagctcaccttgacaaaggtg
tcacaggagagcaaaatggagcacagcccgctctgggccaccttcctgagagcaggagac
atcgagccaccagttgccttttccacatcattgttttcagatccatcactcatggagcac
cagccatcctcttctgtccaggcccaacaaaaagggctgcattttgtggagcaacaccga
gagcagctgatccaacgtgtgacatcagtcagccctgtcctggaccaactctatgggcgc
gtcctgaccaatgagcagtatcagagcatccgaggaatgcccacaccgcaggagcagatg
cggctcctctacagcttcatgccaagctgggatgttgcctgcaaggatctgttccttgat
gcgctgaagaaaaccaatgatcaccttctccaggacctccagggacagtga
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