Lagopus muta (rock ptarmigan): 125686210
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Entry
125686210 CDS
T09141
Symbol
TNFRSF1A
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1A isoform X1
KO
K03158
tumor necrosis factor receptor superfamily member 1A
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04010
MAPK signaling pathway
lmut04060
Cytokine-cytokine receptor interaction
lmut04150
mTOR signaling pathway
lmut04210
Apoptosis
lmut04217
Necroptosis
lmut04920
Adipocytokine signaling pathway
lmut05132
Salmonella infection
lmut05164
Influenza A
lmut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125686210 (TNFRSF1A)
04150 mTOR signaling pathway
125686210 (TNFRSF1A)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
125686210 (TNFRSF1A)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125686210 (TNFRSF1A)
04217 Necroptosis
125686210 (TNFRSF1A)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
125686210 (TNFRSF1A)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
125686210 (TNFRSF1A)
05168 Herpes simplex virus 1 infection
125686210 (TNFRSF1A)
09171 Infectious disease: bacterial
05132 Salmonella infection
125686210 (TNFRSF1A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
lmut04050
]
125686210 (TNFRSF1A)
04090 CD molecules [BR:
lmut04090
]
125686210 (TNFRSF1A)
Cytokine receptors [BR:
lmut04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
125686210 (TNFRSF1A)
CD molecules [BR:
lmut04090
]
Proteins
125686210 (TNFRSF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Death
TNFR_c6
HEAT_Ints3_C
Motif
Other DBs
NCBI-GeneID:
125686210
NCBI-ProteinID:
XP_048785919
LinkDB
All DBs
Position
1:79360855..79373225
Genome browser
AA seq
462 aa
AA seq
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MVGAAKRSTPSPDCRALASQSLVGICRGGLHTGFKAANLKKHISDLMIVVILTFVCVLMD
ESEGIAPVPYMLQLRRVTLDGRYPFNILRREKRQVRCQLGQYLHPKGTHCCMRCHAGTYK
SKDCKWPDQAPVCLPCPNGTFTAVDNIMKKCFQCTRCRAELQQIEETPCTLKQDTVCGCR
KNQYQFGQADFFQCKNCSPCVNGVIANCSKDRDAICRCKPMFFLTLNNVCKHCNSCIGEE
CLQCNSPVTTSPNSSELNGNLILGIIVAIIVVICVLYIVNKAVKLVQKNGIASSFYSCVS
LPQTSKEPVSEVEVKGSAIAVLPEIQKEKELLVNAPPSVPLLQSSHELPDCVRPARKRQL
PDNPAILYTVVDHVPPSRWKEFVRRLGLTDYDLERIEMEHRRLRDAQYEMVRLWKLQMGH
AATVEHISCVLNQMELSGCSEAIQEALLNQNSHQPCSFHSDL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggttggggctgcgaagcgctccaccccttcacctgactgcagagcgctggcatctcag
agcctggttgggatttgtagaggtggcttgcatacaggttttaaagcagcaaacctgaaa
aagcacatttctgacctaatgatagtggttatcctaacatttgtctgtgtgctgatggat
gaatcagagggaattgctccagtgccatatatgctgcaactccgtcgggtaactttggat
ggaagatatccctttaacatcttgaggagagaaaagaggcaagtgcggtgtcagcttgga
caatatctacatcccaaagggacccactgctgcatgaggtgccatgcaggtacctacaag
tcaaaagactgtaaatggcctgaccaggcccctgtctgtcttccctgtcctaatggcacg
ttcacagctgttgacaacatcatgaaaaaatgcttccagtgtacacgatgccgtgcagaa
ttgcagcagatagaagagaccccatgcaccctaaagcaggatactgtgtgtggctgtcgg
aagaatcaatatcagtttggccaggctgatttcttccagtgcaagaactgcagcccatgt
gttaatggagttattgccaactgttcaaaggacagagatgcaatttgcaggtgtaagcct
atgttcttcctgacacttaataacgtttgcaagcattgcaacagctgcattggagaagag
tgcttgcagtgcaatagcccagtgactacctctccgaattcatctgagctaaatgggaac
cttattcttggcatcattgtggcaataattgtagttatctgtgtcctctacattgtaaat
aaagcagtgaagctggttcagaaaaatgggatagcttcttctttctactcctgtgtatct
ttgccgcagacaagcaaggagcctgtatctgaggtggaggtaaaaggaagtgcaattgct
gtccttcctgagatccagaaagaaaaagaattgctagtgaatgcaccaccatctgtacct
ctgctacaaagttcacacgagctaccagactgcgtcagacctgccaggaagaggcagctt
ccagacaaccctgctattctgtacactgtggtggatcatgtaccaccatctcggtggaaa
gagtttgtgaggcgtctgggtctgactgactatgatctggagcgaattgagatggagcat
cgacgtttacgagatgcccagtatgaaatggtcagactctggaaactgcagatgggccat
gctgctactgtggagcacatcagctgcgttctcaaccaaatggagctgagtggctgcagt
gaagctattcaagaggctttgttaaaccagaactctcatcaaccttgcagtttccacagt
gatctttga
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