KEGG   Lagopus muta (rock ptarmigan): 125686251
Entry
125686251         CDS       T09141                                 
Name
(RefSeq) class II histocompatibility antigen, M alpha chain-like
  KO
K06752  MHC class II antigen
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut04145  Phagosome
lmut04514  Cell adhesion molecules
lmut04672  Intestinal immune network for IgA production
lmut05164  Influenza A
lmut05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    125686251
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125686251
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    125686251
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    125686251
   05168 Herpes simplex virus 1 infection
    125686251
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lmut04147]
    125686251
Exosome [BR:lmut04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125686251
  Exosomal proteins of epithelial cells
   125686251
  Exosomal proteins of breast milk
   125686251
SSDB
Motif
Pfam: C1-set Ig_3 Ig_2 MHC_II_alpha C2-set_2
Other DBs
NCBI-GeneID: 125686251
NCBI-ProteinID: XP_048785993
LinkDB
Position
33:688693..691079
AA seq 263 aa
MGAASGRGALVAALLGAALGSVRAEPSLHTLSEVLFCQPDTPLLGLSVAFDSEQLFSFDV
PSSQWLPQLPDGPEWPAGTEQPQELKHDTMLCLMLRDVLTKIATEQQPMPEAKGIPVADV
FLQQPLQLGYPNTLVCMVGNIFPPAITISWQRDGVPITDGVTQLTYIPMEDLSFMRFSYL
EVTPHSGDIYSCIVTRERDNMSVVAYWVPQDPIPSDTLAMAVCGAVTALGVLLALLGLGL
LLSARRRRMWGQRGQWGHRPRTH
NT seq 792 nt   +upstreamnt  +downstreamnt
atgggggctgcgagcgggcgcggggcgctcgtggcagcgctgctgggggcggccctgggg
agcgtcagagccgagccatcgctgcacaccctgtccgaggtgctcttctgccagccggac
acgccgttgctggggctgtcggtggccttcgactcggagcagctcttctcattcgatgtc
cccagctcgcagtggctgccgcagctccccgatggccccgagtggcccgcaggcactgag
cagccccaggagctgaagcacgacaccatgctgtgcctcatgctgcgtgacgtgctcacc
aagattgccactgagcaacagccaatgcctgaagccaagggcatcccggtggctgacgtc
ttcctgcagcagccgttgcagctgggctatcccaacacactggtctgtatggtgggcaac
atcttccccccggccatcaccatcagctggcagcgggacggcgtccccatcaccgacggc
gtcacccagctcacctacatccccatggaggacctgagcttcatgcgcttctcctacctg
gaggtgacgcctcactctggtgacatctactcctgcattgtcacccgcgagagggacaac
atgtctgtggtggcttattgggtgccgcaggatcccatcccttcggacacgttggccatg
gcggtgtgcggtgcggtgacggcgctgggcgtcctgctggcactgctgggtttggggctg
ctgctgtccgcccgccggcgtaggatgtggggacagcggggacagtggggacatcgaccc
cgtactcattga

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