KEGG   Lagopus muta (rock ptarmigan): 125686252
Entry
125686252         CDS       T09141                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DM beta chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut04145  Phagosome
lmut04514  Cell adhesion molecules
lmut04672  Intestinal immune network for IgA production
lmut05164  Influenza A
lmut05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    125686252
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125686252
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    125686252
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    125686252
   05168 Herpes simplex virus 1 infection
    125686252
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lmut04147]
    125686252
Exosome [BR:lmut04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125686252
  Exosomal proteins of epithelial cells
   125686252
  Exosomal proteins of breast milk
   125686252
SSDB
Motif
Pfam: C1-set Ig_2 Ig_3 MHC_II_beta ig C2-set_2 C2-set_3
Other DBs
NCBI-GeneID: 125686252
NCBI-ProteinID: XP_048785994
LinkDB
Position
33:694134..697085
AA seq 262 aa
MGMGSLPPLPPPHCPLNSGAFMVHVASSCPLAANGSLLGFDLTVAFNKNPLVCYDPDVRR
FNACDWRLLHNVAGRIASALNNGSTWVQRAEARRRACSKVAARFWAQTALRRTQPQVRIV
PAQTWNPSVPIRLTCHVWGFYPPEVTIIWLHNGDIVGPGDHSPVSAIPNGNWTYQTQAAL
SVAPELGDTYTCSVQHASLEEPLLEDWRPGLTLEVTLMVAVATVMMVLGLGLLLTGVYCW
RAQPPAPGYTPLPGHNYPSGSI
NT seq 789 nt   +upstreamnt  +downstreamnt
atggggatggggtcactgccaccactgccacctccccactgtcccctcaattcaggtgcc
tttatggtgcacgtggccagctcctgcccgctggcagccaatggctctctgctgggcttt
gacctcaccgtggccttcaacaagaaccccctggtgtgctacgaccccgacgtccgccgc
ttcaacgcctgcgattggaggctgctgcacaacgtggccggacggattgccagtgccctc
aacaacggcagcacctgggtgcagcgcgcagaggcgcggagacgggcgtgcagcaaagtg
gctgcacggttctgggcacagacagcgctgcggaggacccagccccaggtccgcatcgtc
cctgcacagacatggaaccccagcgtgcccatccgcctcacctgccacgtgtggggcttc
tacccccccgaggtgaccatcatctggctgcacaacggggacattgtggggcccggagac
cactcgcccgtgtcggccatccccaatgggaactggacctaccagacacaggcggccctt
tcagtggccccggagctgggggacacctacacgtgctcagtgcagcatgccagcctggag
gagcccctcctggaggactggcgtcctgggctgacactagaggtgactctgatggtggct
gtggccactgtcatgatggtgctggggctcggcttgcttctcactggtgtctactgctgg
cgggcccagccccctgccccaggttacaccccacttcccggtcacaactacccttcaggc
agcatctga

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