KEGG   Lagopus muta (rock ptarmigan): 125686379
Entry
125686379         CDS       T09141                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut03420  Nucleotide excision repair
lmut04110  Cell cycle
lmut04114  Oocyte meiosis
lmut04120  Ubiquitin mediated proteolysis
lmut04141  Protein processing in endoplasmic reticulum
lmut04310  Wnt signaling pathway
lmut04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    125686379 (RBX1)
   04120 Ubiquitin mediated proteolysis
    125686379 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    125686379 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    125686379 (RBX1)
   04350 TGF-beta signaling pathway
    125686379 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    125686379 (RBX1)
   04114 Oocyte meiosis
    125686379 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lmut04121]
    125686379 (RBX1)
   03400 DNA repair and recombination proteins [BR:lmut03400]
    125686379 (RBX1)
Enzymes [BR:lmut01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     125686379 (RBX1)
Ubiquitin system [BR:lmut04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   125686379 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     125686379 (RBX1)
   Cul2 complex
     125686379 (RBX1)
   Cul3 complex
     125686379 (RBX1)
   Cul4 complex
     125686379 (RBX1)
   Cul7 complex
     125686379 (RBX1)
   Cul8 complex
     125686379 (RBX1)
   Cul9 complex
     125686379 (RBX1)
DNA repair and recombination proteins [BR:lmut03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      125686379 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      125686379 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 125686379
NCBI-ProteinID: XP_048786280
LinkDB
Position
1:complement(49060747..49071707)
AA seq 108 aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggccgcgatggatgtggacacccccagcggcaccaacagcggcgccggcaagaag
cgcttcgaagtgaagaaatggaatgcagtagctctgtgggcatgggacattgtggttgat
aactgtgccatttgcagaaaccatattatggatctatgcatagaatgtcaagcaaaccaa
gcatcggctacgtctgaagagtgcacagttgcatggggcgtctgcaatcacgctttccac
ttccactgcatctctcgctggctcaaaactcgccaagtatgcccactggacaacagggaa
tgggagttccaaaagtatggacactag

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