Lagopus muta (rock ptarmigan): 125686656
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Entry
125686656 CDS
T09141
Symbol
HMGCS1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut00280
Valine, leucine and isoleucine degradation
lmut00650
Butanoate metabolism
lmut00900
Terpenoid backbone biosynthesis
lmut01100
Metabolic pathways
lmut03320
PPAR signaling pathway
Module
lmut_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
125686656 (HMGCS1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
125686656 (HMGCS1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
125686656 (HMGCS1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
125686656 (HMGCS1)
Enzymes [BR:
lmut01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
125686656 (HMGCS1)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Cullin
Lectin_C_term
Motif
Other DBs
NCBI-GeneID:
125686656
NCBI-ProteinID:
XP_048786850
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All DBs
Position
Z:complement(14625546..14635003)
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AA seq
539 aa
AA seq
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MRPRWRPAMGFRSVSATMPGSLPVNTESCWPKDVGIVALEIYFPSQYVDQTELEKYDGVD
AGKYTIGLGQSKMGFCSDREDINSLCLTVVQKLMERNSLSYDCIGRLEVGTETIIDKSKS
VKTVLMQLFEESGNTDVEGIDTTNACYGGTAALFNAVNWIESSSWDGRYALVVAGDIAVY
ATGNARPTGGAGAVAMLVGPNAPLIFERGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQ
CYLSALDRCYSVYRNKIHAQWQKEGTDRRFTLNDFGFMIFHSPYCKLVQKSVARLLLNDF
LSDQNAETANGVFSGLEAFRDVKLEDTYFDRDVEKAFMKASAELFNQKTKASLLVSNQNG
NMYTPSVYGCLASLLAQYSPEHLAGQRISVFSYGSGFAATLYSIRVTQDATPGSALDKIT
ASLSDLKARLDSRKCIAPDVFAENMKIRQETHHLANYIPQCSVEDLFEGTWYLVRVDEKH
RRTYARRPVMVDGPLEAGVEVVHPGIVHEHIPSPAKKVPRIPATTESEGVTVAISNGEH
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccgcgctggcggccggccatgggcttccgcagcgtatctgccacgatgcccggg
tctcttccagtgaacactgaatcctgctggcccaaagatgtgggtattgttgcactggaa
atatattttccctctcagtatgttgaccagacagagctggagaagtatgacggtgtggat
gcaggcaaatacaccattgggttaggccagtcaaagatgggcttctgctctgaccgagag
gatatcaattccctctgtttgactgtggttcagaagcttatggagaggaacagcctatcc
tacgactgcattgggagactggaagttggaacggagacaataattgataaatcaaaatcg
gtgaagactgtcctgatgcagctgtttgaagaatctggtaatacagatgtagaaggaatt
gacacaaccaatgcgtgctatggaggcactgctgctctttttaatgctgttaattggatt
gagtccagttcttgggatggacgctatgcacttgttgttgctggagacattgccgtgtat
gccactggaaatgccaggccaacaggtggagctggtgctgttgctatgctagttggtcca
aatgctcctctaatttttgagagaggattgcgtggaacccacatgcagcatgcttatgac
ttctataaaccagatatggtctctgaatatcctgtagttgatggcaaactgtctatacag
tgctacctcagtgcattagatcgctgctatagtgtttatcgcaacaagatccatgcccag
tggcaaaaagaggggacagacagacgtttcaccttgaatgattttggattcatgatcttt
cattctccctactgtaaactggtacagaagtctgtggcaaggctattgctgaatgacttt
ctcagtgaccagaatgcagaaacagcaaatggtgttttcagtggtctggaagctttcagg
gatgtaaagcttgaagatacatattttgacagggatgtggaaaaagcttttatgaaagct
agtgcagagctcttcaatcagaaaaccaaagcttctttacttgtgtccaatcagaatgga
aacatgtacacgccttcagtctacggttgccttgcttctcttctagcccaatactctcca
gagcaccttgcaggacaaagaattagtgtgttctcctatggctctggttttgctgctaca
ctgtattccatcagagttacacaggatgccactcctggttctgcactggacaaaattact
gccagcctttctgatcttaaagcaagacttgactcaagaaaatgcattgcacctgatgtc
tttgctgaaaacatgaagattagacaggagacacatcacttggccaactatattccacag
tgttcagtagaagatctctttgagggaacgtggtatcttgtgcgtgtggatgagaaacac
agaagaacatacgcgcggcgcccagttatggttgatggacccctggaggcaggagttgaa
gttgtccacccaggcattgttcatgagcacatcccaagccctgctaagaaagtgccaaga
atccctgcaacaacagaatctgaaggcgttactgttgccatttccaatggggagcattaa
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