Lagopus muta (rock ptarmigan): 125687541
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Entry
125687541 CDS
T09141
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein otx5-like
KO
K09337
cone-rod homeobox protein
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125687541
Transcription factors [BR:
lmut03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
125687541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Motif
Other DBs
NCBI-GeneID:
125687541
NCBI-ProteinID:
XP_048788673
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Position
37
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AA seq
487 aa
AA seq
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MLHCTMQPCTRSPAPRHVALHHATLLHATASCNLVPHHVALHCATLHAMMHCTVPHCTMQ
PCTIPCCTAPRNPAPCHSAPCNLASCKLAPCHVALHHATLHAMLHYAMLHCTTQAYTTPC
CIAPCNVASCNPAPCHIALHQATLHAMLHCIMLHCTTQPCTTPCCTAPRSPAPRHAALPR
AMLHCCTLPSCRVPAARSMMSYIKQPHYAVNGLTLAGPGMDLLHSAVGYPATPRKQRRER
TTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVGAKFKNRRAKCRQQQQQS
SGQPKARPAKKKPSPPPGTKATPGAPGRTAPSQPGPAGTPGPAAPVSIWSPASISPVPDP
LAAGSAPGLPRSAPFSAAPYNQTAPYGQSYGGSAAYFGGLDCGPYLSPMHPPLGAPGAAL
SPLGAPMGAHLAPSPAALSGQSFGAGLGFGAVDCLEYKEQAGSWKLNFNPADCLDYKEQS
SWKFQVL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgttgcactgcaccatgcagccttgcacacgcagccctgcaccacgccatgttgcactg
caccatgcaactctgctccatgctactgcatcatgcaaccttgtgccacaccacgttgca
ttgcactgtgcaactctgcatgccatgatgcattgcactgtgccacactgcaccatgcaa
ccatgcaccataccatgttgcactgcaccacgcaaccctgcaccatgccactctgcaccg
tgcaaccttgcatcatgcaaacttgcaccatgccacgtcgcattgcaccatgcaactctg
cacgccatgctgcactatgccatgctgcactgcaccacgcaggcatacaccacgccatgt
tgcattgcaccatgcaatgttgcatcatgcaaccctgcaccatgccacattgcactgcac
caagcaactctgcacgccatgttgcattgcatcatgctgcactgcaccacgcagccctgc
accacgccatgttgcactgcaccacgcagccctgcaccacgccatgcagccttgccccgt
gccatgctgcactgctgcacgctgccctcatgccgtgtccccgcagctcggagcatgatg
tcctacatcaagcagccccactacgccgtcaatgggctgacgctggctgggcctggcatg
gatttgctgcattctgctgtggggtaccctgccaccccccggaagcagcgccgtgagcga
accaccttcacacgggcacagctggacatcctggaggcgctgtttgccaaaacgaggtac
cccgacatcttcatgagggaggaggtggccctgaagatcaacctgccggagtcccgcgtg
caggtgggtgcaaagttcaagaaccgccgcgccaagtgccgccagcagcagcagcagagc
agcgggcagcccaaggctcggccggccaagaagaagccgtccccgcccccgggaaccaaa
gcgacgccgggggcgccgggccgtacagccccctcgcagcccggccccgcggggaccccc
ggccccgccgccccggtgtccatttggagcccggcttccatctccccggtgccggacccg
ttggccgccggcagcgcccccggtttgccgcgttccgctccgttctccgccgctccctac
aaccaaacggcgccctacgggcagagctacgggggctcggccgcctatttcgggggcctg
gactgcgggccgtacctctcccccatgcatcctccgctgggggctcccggagcggctctc
agccccctgggggcacccatgggcgctcacctggcgccctcccccgccgctctgtccggg
cagagctttggggcaggcctgggcttcggagcggtggattgcttggagtacaaagagcag
gcggggagctggaagctcaacttcaacccggccgattgcctggactacaaggagcagagc
tcctggaagttccaggtgttgtga
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