Lagopus muta (rock ptarmigan): 125689287
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Entry
125689287 CDS
T09141
Symbol
TNFAIP3
Name
(RefSeq) tumor necrosis factor alpha-induced protein 3
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04217
Necroptosis
lmut04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
125689287 (TNFAIP3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125689287 (TNFAIP3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lmut01002
]
125689287 (TNFAIP3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmut04121
]
125689287 (TNFAIP3)
Enzymes [BR:
lmut01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125689287 (TNFAIP3)
Peptidases and inhibitors [BR:
lmut01002
]
Cysteine peptidases
Family C64
125689287 (TNFAIP3)
Ubiquitin system [BR:
lmut04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
125689287 (TNFAIP3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-A20
OTU
Motif
Other DBs
NCBI-GeneID:
125689287
NCBI-ProteinID:
XP_048792201
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All DBs
Position
2:55977183..56005302
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AA seq
806 aa
AA seq
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MAGQHILPQALYQSNMLKAVKIRERTPEDLVRPPSGIIHHFRTMHRYTIEMFRMCQFCPQ
FREMLQKALTDQATQTSLERQRKLNWCMEVRRLVPLKTSGDGNCLMHAASQYMWGIEDVD
LVLRKTLFSALRETDTQNFKLRWQREAIKSQEFVQTGLHFDTRNWEDEWEYLIEMTSPET
SGARNRLPYNALEEIHIFVLANILRRPIVVLADKVVRSLESGSSFAPLNVGGVYLPLLWP
AEECYRYPIVLGYDNMHFTPLVTLKDSGPEIRAVPLVTSERGRFEDLNVHFLTDAEEREK
EQLLKDYLIVIEIPVQGWDHGTTHLINAAKLDEGNLPKDINLVEDYFQLVQHEYKKWQEH
GEPARKEACSRNRQELSFSQLSLLQVKCETPNCPFYMSVNTQPYCHECYERRSQGSKGRK
QVSEAAPEKLKAAGLGCGKACEPGGWMSEEAVTGPRSAPPTAPSLFLYSETTAMKCRTPD
CPFTLNVQHNGLCERCYNARQLAPCNNLDDQRCLDYATCKVCLQKANRTFNGICSTCFKR
TTERSSNGSPGFVPTCHQRSTSDPSQIPQSLLQHSCQQAPNNNCDELPLAALPHAPHTLE
EKKGSKLCRKPGCKFFGTAQNEGFCTLCFFEYRENHDSASLRHQRRSQRNSSAAGQQGSS
AAAFHNMSCQQQNCGTLGSTMLEGYCQNCFIKAQSQRFQEARRTEEQLVRQPERTGQRRD
LQRAALTSQKRQCAVASCRNNLACRSSELCQQCQRVGQLVQLGGPREPATDEPPKQRCRA
PACDHYGNNKCNGYCNECYQFKQIYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggctggccaacacatccttcctcaggctttgtatcagagcaacatgctgaaggctgtg
aagattagagaaaggacacctgaagatctggtcagacctcccagtggaataattcaccac
ttcaggactatgcacagatacactatagaaatgttcagaatgtgccagttttgccctcaa
ttccgggaaatgcttcagaaggccctgactgaccaagccactcagacttcgctggagcgc
cagaggaagctgaactggtgcatggaggtcaggagacttgtgcctttgaaaacaagtggt
gatggaaattgcctcatgcatgctgcatcgcagtacatgtggggtattgaagatgttgac
ctcgtcttaaggaaaactttgtttagtgcactcagggagactgacacacagaacttcaag
ctgcgctggcagcgggaggctattaaatcccaggagtttgtgcaaacaggactccacttc
gacacccggaactgggaggacgagtgggagtacctcattgaaatgacctccccggaaaca
tctggggctcgaaacagacttccttataatgcactggaagaaatccacatctttgttctt
gctaatatcctcagaagaccaatcgttgtccttgcagataaagttgtgagaagtttagaa
tcaggctccagttttgctcctctgaacgttggtggtgtttacctgccactcctttggcca
gctgaagaatgctacagatatccaattgtgctcggctatgacaatatgcattttacacca
cttgtgaccctgaaggacagtgggccagaaatccgggctgtccctctggtcaccagtgaa
cgaggcagatttgaggatttgaacgtgcactttctgacagatgcagaggagagggagaag
gagcagctgctgaaagactacttgatagtcatagaaattccagtgcaaggctgggatcat
ggcacaactcatttaattaatgctgcaaagttggatgaaggcaacctgcccaaagatata
aatcttgtggaagattactttcaactggtgcagcatgagtacaagaaatggcaggagcat
ggtgaacctgccagaaaagaggcctgctccaggaacagacaggaactgtctttttcccag
ctctcccttttacaggtgaaatgtgaaactccaaactgccctttctatatgtctgtgaac
acccagccctactgccacgagtgctatgagcggaggtcacaaggaagcaaaggaagaaag
caggtctctgaagcagcacctgagaaactgaaagcagctgggttgggctgcggtaaagct
tgtgaacctggggggtggatgtctgaggaggctgtaacagggcctcgctctgcaccccca
actgctcccagccttttcctctatagtgaaaccactgccatgaaatgccggactccagac
tgccccttcaccttaaatgtgcaacacaacggactttgtgaacgctgctacaatgccaga
cagcttgctccttgtaataatttagatgaccagagatgcttggactatgccacgtgtaaa
gtctgccttcagaaggccaataggacatttaatggcatatgcagcacttgtttcaaaagg
actacagagcgctcctcgaatggcagccctggttttgtacccacgtgccatcagagatct
acatctgacccatcccagatcccacagagcctccttcagcattcctgccagcaagctccc
aacaacaattgtgatgagctgccgttggctgcactgcctcatgccccacacactttggaa
gagaagaagggaagtaagctctgcaggaagcctggctgcaagttttttggaacagctcag
aatgagggcttttgcacgctgtgcttctttgaatacagggaaaaccatgacagtgcttca
ctacgccatcagaggagatctcagaggaattcctcagcagctggtcaacaggggagctca
gctgccgctttccacaatatgtcttgccagcagcagaactgtggcaccctgggtagcacc
atgctggagggctactgccagaactgtttcattaaagcccagagccagcgatttcaggaa
gccagaaggacagaagagcagctagtgagacagcctgaaagaacaggacagcgcagagat
ctacagcgagcagcactgactagccagaagagacagtgtgctgtggcttcgtgtcgaaac
aacctggcctgcagaagcagtgagctgtgccagcagtgccagcgcgttggccagcttgtg
cagctggggggtcccagggagccagccacagatgagcctccgaagcaacgctgtcgagcc
cctgcttgcgaccactatggtaataacaagtgcaatggttattgcaatgaatgctaccag
ttcaaacagatctacggctag
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