Lagopus muta (rock ptarmigan): 125689750
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Entry
125689750 CDS
T09141
Symbol
OTOF
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125689750 (OTOF)
Membrane trafficking [BR:
lmut04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125689750 (OTOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Med19
Motif
Other DBs
NCBI-GeneID:
125689750
NCBI-ProteinID:
XP_048793240
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All DBs
Position
2:complement(5706866..5778849)
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AA seq
2019 aa
AA seq
DB search
MALQLQLRTVSGLRGRADRIAKAAFRGLSFYTRVLENCEDEARFDETFRWPVASNIDGNE
ILEIQVFNYSKVFTNRLIGTFRMVLQKVVEEGHVEVMDTLIDDNNSAIQTSISIEIRYQA
LDGTVGTWNDKEFLETPSVHSEGDGRYPLETDSLLSGHRQSTDGSVGKSNQQSTERSFRR
AGKGVFSAMKLGKARPTKDDHRKQDEPAVLEAEDLDRKVMRLGGGLDPDTISLASVTAVT
TNVSNKRSKPDIKMEPSAGRPMDYQISITVIEARQLVGLNMDPVVCVEVGEEKKYTSMKE
STNCPYYNEYFVFDFHVPPDVMFDKIIKLSVIHSKNLLRSGTLVGSFKMDVGTVYTQPEH
QFYHKWAILSDPEDLTAGLKGYLKCDIAVVGKGDNIKTPHKANETEEDDIEGNLLLPDGV
PPERQWARFYIKIYRAEGLPRMNTSIMANVKKALIGENKDLVDPYVQVAFAGQKGKTSVQ
KSSYEPLWNEQIIFTEMFPPLCKRIKIQIRDSDKVNDVAIGTHFIDLRKISNEGDKGYLP
TFGPAWVNMYGSTRNYTLMDEHQELNEGLGEGVSFRARLLMSLAVEILDTSNPEINSSTE
VQVEQATPVADNCTGKMEEFFLFGAFLEATMIDRKIGDKPINFEVTIGNYGNQIDGMTKP
VLRRKKEGGDGDEEESELLHNSSEDEADEDGEMVSVSSSQPMKPLVTDRNYFHLPYFEKK
PCIYIKSWWQDQRRRLYNANIMDKIADKLEEGLNDVQEMIKTEKPHPERRLRGVLEELSS
GCLRFVTLADKDQHHSSRTRLDRERLKSCMRELENMGQQATTLRSQVKKNTMKDKLKQVQ
NFLQKLRFLADEPQHTIPDIFVWMMSNNKRIAYARVPSKDILYSIVDEEMGKDCAKVKTV
FLKLPGKRGFGPAGWTVQAKMEIYLWLGLNKQRKDFLSGLPCGFEEKKTTRGQNLPSFPP
ISLLYTKKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFTSQSQCTEVLNETLCPTWDQ
LLVFDNVELYGEAHEMRDDPPIIVIEIYDQDTVGKADFMGRTFAKPVVKMSDEQYCPPRF
PPQLEYYQIYRGNSTAGDLLAAFELLQIGSGGKSDLPPIDGPTDIDRGPILPVPLGIRPV
LSKYRVEILFWGLRDLKRVNLAQVDRPRVDIECAGKGVQSALIQNYKKNPNFSTLVKWFE
VDLPENELLHPPLNIRVVDCRAFGRYTLVGSHTVSSLRKFIYRPPDKKAQHWNMTAKQLK
GYLAMANGAPHSRPTGEIIVNMEPEVPIKKMETMVKLEANSDAVVKVDVSEEEKEKKKKK
KKGGGGGGGEEIEEEEPDESMLDWWSKYFASIETMKEQLRQQEAAAAEAEEKEEMEIADE
IKFDDSPMKGFKGQAKNKEKSKTPKDDKKKKQQSAPELPEKKNKQKIDELKVFNKELETE
FDNFEDWLHTFNLLRGKIGDNDDNATEEERIVGRFKGSMCVYKVPLPDDITKEAGYDPTF
GMFQGIPSNDPINVLVRVYIVRATDLHPADINGKADPYIAIKLGKTDIKDKENYISKQLN
PVFGKSFDIEATFPMESMLTVAVYDWDLVGTDDLIGETKIDLENRYYSKHRATCGVSQTY
SIHGYNIWRDPMKPSQILSKLCKEGKVDGPHFGPGGRVKVANRVYTGPTEIEDENGQKKQ
TDEHLALTVLRHWEDVPRAGCKLVPEHVETRPLLNPDKPGIEQGRLEMWVDMFPMDMPAP
GPAIDISPRKPKKYELRVIVWNTDEVILEDDDYFTGEKSSDIFVRGWLKGQQEDKQDTDV
HYHSLTGEGNFNWRYIFPFDYLMAEEKIVISKKESMFSWDETEYKIPARLTLQVWDADHF
SADDFLGAIELDLNRFPRGAKTSKQCSLEMVTNEAELPMVSIFKQKRVKGWWPFVARDEN
DELEITGKVEAELHLLTAEEAEKSPAGLARNEPDPLEKPNRPDTSFIWFLNPLKSIKYLI
CTRYKWLIIKIVLALLLLIMVALFLYSMPGYMVKKLLGA
NT seq
6060 nt
NT seq
+upstream
nt +downstream
nt
atggctctgcagctgcagctccgcaccgtctccggcctccgcggcagagcagatcgcatc
gccaaagcggctttccgagggctctccttctacacccgagtgctggaaaactgtgaggac
gaggccaggtttgatgagaccttccgctggccagttgcaagcaacatcgacgggaatgag
atcttggagatccaggtcttcaactacagcaaagtcttcaccaataggcttatcggcact
ttccggatggtcctgcagaaggtggtggaggaagggcacgtggaggtgatggatacgctc
atagatgacaataattcagccatccagaccagcatctccatagagatcaggtaccaggct
ctggatggaacagtgggcacgtggaatgacaaggaattcctggagactcccagtgtccac
tcagaaggggacggcaggtaccctctggagacagacagcctcctctccggccatcggcag
agcacagacgggtctgtgggcaaatccaaccagcagtctacagagagaagcttcaggaga
gctgggaaaggagttttttcagccatgaagcttggcaaggcacgtcccacaaaagatgac
catcggaagcaagatgaacccgctgttctggaggcggaagacctggaccgaaaagtcatg
aggcttggaggggggctggacccagacaccatctccttggcctctgtcacagctgtcacc
accaatgtctcaaacaagaggtccaaacctgacatcaaaatggagccaagtgctgggagg
ccgatggattaccagatcagcatcactgtcattgaggcccggcagctggttgggctcaac
atggaccccgtggtctgcgtggaggttggggaggagaagaagtacacatccatgaaggaa
tcaaccaactgcccttactacaatgagtactttgtcttcgatttccatgtgcctccagat
gtcatgttcgataagatcatcaagctgtccgtgatccactcaaaaaacctcttgcgtagt
gggactttggtgggctccttcaagatggacgttgggacagtttacacccagcctgagcac
cagttctaccacaaatgggccatcctttctgaccccgaggatctcactgctgggctgaaa
ggttacctgaagtgtgacatcgctgttgtggggaaaggggacaatatcaagacaccccac
aaagccaacgagacagaggaggatgatattgaagggaacctcctcctaccagatggagtt
cctccagagaggcagtgggctcgtttctacatcaagatctatcgagcagagggcctgccc
cgtatgaacaccagcatcatggccaacgtgaagaaggctctcattggagagaacaaggac
ttggtagacccctacgtgcaagtggcatttgcagggcagaaggggaagacatcagtgcaa
aaaagcagctatgagcctctttggaatgagcaaatcatcttcacagaaatgttcccccca
ttgtgcaagcggataaagatccagatccgagactcagacaaagtcaatgatgtggccatt
ggtacccatttcattgatttgaggaagatctctaatgaaggagacaaaggttatctgccc
acctttggccccgcgtgggtgaacatgtatggctccactcggaactacactctgatggat
gaacaccaagagctgaacgaaggattgggggaaggcgtctccttccgggccaggcttctg
atgagccttgctgttgagatactggataccagcaacccagagatcaacagctccactgag
gtgcaagtggagcaggccacaccagttgctgataactgcactggaaagatggaggagttc
tttctttttggagccttcttggaagctaccatgatcgacaggaagatcggtgacaaaccc
atcaactttgaggttacaataggcaactatgggaaccagattgatggcatgaccaaacct
gtcctgcggaggaagaaggagggaggggatggggacgaggaggaatccgagctgctgcac
aactccagtgaggatgaagctgatgaggatggagagatggtctctgtctcctcatctcag
cccatgaagcccctggttacagacaggaactacttccacctgccatactttgagaagaag
ccctgcatctacatcaagagctggtggcaggatcagcgccgcaggctgtataacgccaac
atcatggacaagattgcagacaagctggaggaagggctcaatgatgtacaggaaatgatc
aagacagagaaacctcatccagagcgccggctccgaggggtcctggaggagctgagcagc
ggatgcttgcgctttgtgacgctggctgacaaggaccagcaccactcttctcgcacgagg
ttggaccgggagaggctcaagtcctgcatgcgggagctggagaacatgggccagcaagcc
acgactctgcggtcacaggtgaagaagaacaccatgaaagacaagctgaagcaggtgcag
aacttcctgcagaagctccgtttcttggcagacgagccccagcacaccatccccgacatc
ttcgtctggatgatgagcaataacaagcgcattgcctatgcccgtgtcccttctaaggac
atcctctactccattgtggatgaggagatgggcaaggactgcgccaaagtgaagaccgtc
ttcctcaagctgcctgggaagaggggtttcggacctgccggctggacagttcaggccaag
atggagatttacttatggctgggcctcaacaagcagcgcaaagacttcctgagtggtttg
ccctgtggcttcgaggagaaaaagaccaccagaggccaaaacctgccgtccttccctccc
atcagccttctttacaccaagaagcaagttttccagctgcgagcccacatgtaccaggcc
aggagtttatttgctgctgacagtagtggtctttcagatccctttgcccgagtcttcttc
acctcccagagccagtgcactgaggttctcaatgagaccctgtgcccaacctgggaccag
ctgctggtttttgacaatgtggagctgtacggagaagcccatgagatgcgggacgaccct
cctataattgtcattgagatctatgaccaggacacagtgggcaaagctgacttcatgggc
cgcacctttgccaaaccagtggtgaaaatgtcagatgagcagtactgcccaccacgcttc
cccccacagctggaatactaccagatctaccggggcaactctacagcaggagatcttctg
gctgccttcgagctgctccagattggttctgggggcaagtcagacctgcccccaattgat
ggccccacagacatagaccgaggccccatcctgccggtgccactggggattcggccggtg
ctgagtaaatacagagtggagatcttgttttggggactcagggacctgaagagagtgaac
ctggcccaagtggaccgaccccgtgtggacattgagtgtgctgggaaaggggtccagtca
gccctcatccagaactacaagaaaaacccaaacttcagcactttggtcaagtggtttgaa
gtggacctcccagagaatgagctgctccacccgcccttgaacatccgagtggtggactgc
cgggcttttgggcgctacaccttggtgggctcccatactgtcagctccctccgaaagttc
atctaccgcccaccagataagaaagcccagcactggaatatgacagctaaacagctcaaa
ggctatctggcaatggccaacggggcccctcactctcgccccacaggggagatcattgtc
aacatggaacctgaggttcctatcaagaagatggagaccatggtgaagctagaagctaac
tctgatgcggtggtgaaggtggatgtgtctgaagaagagaaggagaaaaagaaaaagaag
aagaaaggaggaggaggaggaggaggagaagagatagaagaggaggagccagatgagagc
atgctggactggtggtccaagtattttgcttcaattgagactatgaaagagcaacttcgg
cagcaggaagcggctgcagcagaagcagaggagaaggaagaaatggagattgcagacgaa
atcaaatttgatgactctcccatgaaaggcttcaagggccaggcaaagaacaaggagaag
tccaagacacccaaagatgacaagaagaagaagcagcagtcagcccctgagctccccgag
aagaagaacaagcagaagattgatgaactgaaggtcttcaacaaagagctggaaacagag
tttgataactttgaggactggctgcacaccttcaacctgctccgtgggaagattggggac
aatgatgacaatgcaacagaagaagagcggatagtgggaaggttcaaaggatccatgtgt
gtctacaaagtgcctctccctgatgatattacgaaggaggcaggatacgaccccaccttt
ggcatgttccaggggattcccagcaatgaccccatcaacgtgctggtccgagtctatatt
gtgagggccacagacctccacccagctgacatcaacgggaaagctgacccttatattgcc
atcaagctggggaagacagacatcaaagacaaggagaactatatctccaagcagctgaac
cctgtctttggaaagtcctttgacattgaggccaccttccccatggagtccatgctgaca
gtggcagtgtacgactgggacttggtggggacagatgacctcattggggagaccaagatt
gacctggagaaccgctactacagcaagcaccgagctacatgtggggtgtcacagacttac
tccatacatgggtataacatctggcgtgaccccatgaagccctcccagatcctgtccaaa
ctgtgcaaagagggcaaagtggatgggccacactttgggccaggaggaagagtgaaagtt
gccaacagggtgtacactggtcccacggagattgaggatgaaaatggtcagaagaagcag
acagatgaacacttggccctgaccgtgctgcgccactgggaggatgtcccacgggcaggc
tgcaagctggtccctgagcacgtggagacgcgcccgctgctgaaccctgacaagccgggc
attgagcagggtcgcctggagatgtgggtggacatgttccccatggatatgccagcacct
ggccctgccattgatatttcccccaggaaaccaaagaagtatgagctcagagtgatagtg
tggaacacagacgaggtcatcctggaagatgatgactacttcactggcgagaaatccagt
gacatttttgtcagggggtggctgaagggtcagcaggaggacaagcaagatacagacgtc
cattaccactcgctcactggcgaaggcaacttcaactggcgttacatcttcccctttgac
tacctgatggcagaggagaagattgtcatttccaaaaaagaatccatgttctcctgggac
gagaccgagtacaagatcccagctcgcctcaccctgcaggtctgggatgctgaccacttc
tcagccgatgatttccttggggccatcgagttggacctgaaccgctttccccggggagcc
aagacatccaagcagtgcagtctggaaatggtgacaaacgaggcagagctgcccatggtc
tcaatcttcaagcaaaagagggtgaagggctggtggccatttgtggccagggatgagaat
gacgagctggagatcaccgggaaagtcgaagctgaactgcacctcctgactgcagaggag
gcagagaaatcgcctgctgggctggctcgcaatgagcccgacccgctggagaaacccaac
cgtccagacacgtctttcatctggttcctcaaccctctcaagtccatcaaataccttatc
tgcacccgctacaagtggctcatcatcaaaatcgtgctggccctgttgctgctcatcatg
gtggccctcttcctctacagcatgccaggctacatggtcaagaaactcctgggagcatga
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