Lagopus muta (rock ptarmigan): 125690224
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Entry
125690224 CDS
T09141
Symbol
DSE
Name
(RefSeq) dermatan-sulfate epimerase isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
lmut01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
125690224 (DSE)
Enzymes [BR:
lmut01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
125690224 (DSE)
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Gene cluster
GFIT
Motif
Pfam:
DUF4962
SYF2
Motif
Other DBs
NCBI-GeneID:
125690224
NCBI-ProteinID:
XP_048794366
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Position
2:46859859..46891608
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AA seq
959 aa
AA seq
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MRTHTRGAPSVFFIHVMCFAFACGIREDVDAMVPFVNANYDSYPMLYFSKGDVEGLRLQA
ATTHRHITARLMEAVQTMLSNPLEYLPPWDPKEFSARWNEIYGNNLGALAMFCVLYPDNT
EAIGMAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYSYLSKTQQERFLEV
IANASGYMYETSYRRGWGFQYLHNHQPTNCVALLAGSLVLMNQGYLQEAYLWTKQVLAIM
EKSVVLLQEVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFDINHFNHPWLKQHFAFMYRT
VLPGFQRTVAIADSNYNWFYGPESQLVFLDKFVMRNGSGNWLADQIRRNRVVEGPGTPSK
GQRWCTLHTEFLWYDASLRSIPPPDFGVPKLHYFEDWGVVTYGSALPAEINRPFLSFKSG
KLGGRAIYDIVHKNKYKEWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTFF
NNVLMFSPAVSKSCFSPWEGQITEDCSSKWLKYKHDLAGDCQGRVVAAMERSGVVFIRGE
GVGAYNPKLKLRKLQRNLILLHPQLLLLVDQIHLEDDSPLEAATSFFHNVDVPFEETVVD
EIHGAFIRHRDGIYKMYWMDDTGHSEKATIASRMYPRGYPYNGTNYVNVTTLLRHPITRA
IYLFIGPSIDVQSFTVRADSRQLDVFVTTNEHSYAVYLWTVEDGPRSAFAQVTAGRQKIV
FDRTSAIRNFAVPEVKDYIGIVERNLQHFKPVFQQLEKQILSRVRNTASFRKTAERLLRF
SDKRQTEEAIDRIFAISQRQQQQRGRAKKNRKLSKGYKFIDAVPDIFAQIEVNERKVRQK
AQTQAQKELPVDEDEEMKDLLDFADITYVKHKTGVSIKGRSGLAQLVATTRSSAPSISAS
YTRLFLILNIAIFFVMLAMQLTYFQKAKRLHGQRCLYAILLVDSCILLWLYSSCSQSQC
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgaggactcacacccggggagccccaagtgtgtttttcatacatgtgatgtgcttcgcc
ttcgcttgcggcatcagggaggacgtggatgccatggttccttttgtcaatgccaactac
gacagttatcccatgctctacttttccaagggtgacgtggagggtctgcgtctccaggca
gcaaccacacaccgacacatcacggctcggctgatggaggcagtgcagacaatgctgtca
aaccccctggagtacctcccgccatgggatccaaaggagttcagcgctcggtggaatgag
atttacggcaacaacttgggggccttggcaatgttctgtgttctctatcctgacaacact
gaagccattggcatggccaaggattacatggagaggatggcagctcagcctagttggctg
gtgaaggatgccccatgggatgaggtccctctggctcactccttagttggctttgccaca
gcttatgacttcttgtacagctatcttagcaagactcaacaggagagatttcttgaggta
attgccaatgcttcgggatatatgtacgaaacatcatacagacgaggatggggtttccag
tatctccataaccaccagcctaccaactgtgtggccctgctggctggaagcctggttctg
atgaatcaaggctaccttcaggaagcttacttatggaccaagcaagtattggcaatcatg
gaaaagtcagtagtcctgctgcaggaggtcacagatggctccctctatgaaggggtggct
tatggcagctacacaaccaggtcactgtttcagtacatgtttcttgtccaaaggcacttt
gatatcaatcacttcaaccacccctggctcaagcagcactttgcatttatgtacaggact
gtcctgccagggtttcagaggactgtggccattgcagactccaattacaactggttctat
gggccagagagccagctggtgtttctcgacaaattcgtcatgcgcaatggcagcgggaac
tggttggcagaccagatcaggaggaatcgggtggtggagggcccggggactccatccaaa
gggcagaggtggtgcactctccacactgaatttctctggtatgatgcaagtttgcgctcc
atccctccgccagactttggggttccaaagctgcattactttgaggactggggagtggta
acctacggaagtgctttgccagctgaaatcaacaggcctttcctttccttcaagtcagga
aagctgggaggacgtgcaatatatgatattgttcataagaacaagtacaaagagtggatc
aagggatggaggaactttaacgctggccatgaacacccagaccagaactcctttactttt
gctcccaatggcgtacctttcattacagaagctctgtatgggccaaaatatacttttttt
aataatgtattgatgttttcccctgctgtgtccaagagctgcttctccccatgggaaggg
cagattacagaggactgttcttcgaaatggcttaaatataaacatgatttggctggtgac
tgccagggacgagtggttgctgccatggagagaagcggtgtggtttttatcaggggagaa
ggagtgggggcatacaatcctaaactgaagctgagaaaattgcaaagaaacctcatactt
cttcatcctcaacttttgttgctggtggaccaaattcacctagaagatgacagccctctg
gaggcagcaaccagtttcttccacaatgtggatgtgccttttgaagaaacagttgttgat
gagattcatggggcattcattagacatcgtgatggaatatataagatgtactggatggat
gacactggccacagcgagaaagctaccattgcctcaagaatgtatccccggggctaccct
tataatggaacaaactatgtgaatgtaacgaccctcctgcggcaccccatcaccagagcc
atttacttgttcattgggccctccattgatgtgcaaagcttcactgtccgtgccgactct
cggcagctggatgtttttgtcaccaccaatgagcactcctatgcagtttacctgtggacg
gtggaggatgggcctcgttctgcctttgcacaggttactgcaggccgtcagaaaattgtc
tttgaccgaacgtctgccattaggaactttgcagtgccagaagtgaaggactacattggg
attgtggagaggaacctgcagcattttaagcctgttttccagcagcttgaaaagcagatc
ttgtctcgtgtacgaaacacagctagctttaggaagactgctgaacgcctgttgaggttt
tcagataagagacagacagaagaggccattgatagaatatttgcaatctcacagaggcag
cagcagcagcgtggaagagcaaagaaaaatagaaaattatccaaaggttacaaattcatt
gatgctgttcctgacatttttgcacaaattgaggtaaatgaaagaaaagtgcgacagaag
gcacagactcaagcacaaaaagagttgcctgttgacgaagatgaggaaatgaaagatctt
ctggattttgcagatatcacttacgtgaagcacaaaactggagtttcaatcaagggccga
tcagggctggcacagttggtggcaaccactcgaagtagtgccccatcaatatcagcttct
tatactcgcctctttctaattctcaacattgctattttttttgtcatgttagcaatgcag
ctcacatactttcagaaggccaagagactgcatggccaaagatgtctgtatgcaatactt
ttagtagatagctgtatattattgtggctgtattcttcctgttctcagtcacaatgttag
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