Lagopus muta (rock ptarmigan): 125693140
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Entry
125693140 CDS
T09141
Symbol
RET
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret isoform X1
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04010
MAPK signaling pathway
lmut04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125693140 (RET)
04020 Calcium signaling pathway
125693140 (RET)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lmut01001
]
125693140 (RET)
Enzymes [BR:
lmut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
125693140 (RET)
Protein kinases [BR:
lmut01001
]
Receptor tyrosine kinases (RTK)
RET family
125693140 (RET)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD1
RET_CLD3
Pkinase
RET_CLD4
RET_CRD
Cadherin
Cadherin_FAT4_N
RIO1
Pkinase_fungal
ABC1
Haspin_kinase
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
125693140
NCBI-ProteinID:
XP_048800621
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All DBs
Position
5:33820534..33969733
Genome browser
AA seq
1102 aa
AA seq
DB search
MYGQSSFSYFLTASFGLYFPRKEYSENVYIDQPAGTPLLRIHALRDSHGESAHFHLCQNL
IISRARSHENHWFQIREKMGLLYLSKSLDREDFNMLSVGNWMPLSKVMLYVFLSSHPFQE
KECDSATRTTVVLSLINATAPACSSMTARQLCFTEMDLSFHIKENKPPGTFHQLQLPSVH
HLCQNLSITYKLLAAEGLPFRYNENSTSVSVTQRLDREERERYELIAKCTVREGFREMEV
EVPFLINVLDEDDSPPFLPNGTDTADAVVEFNRKEGTVLATLTVYDADTTPIYPLESSRK
KYTGTIITDDPWINETFRVEHIFEEIHFSPNGSQVRGTQHEYKLVLNKSISVTEHRSFQL
DVLVNDTEFNGPERSVMLHFNVSILPVSIQFPNTTYRFTVNRNAQRFAQIGKVCIENCMK
FRGVNITYKLLSPNVSCYAVGILQGREDKYGSVYVNDSSVLLRPECKEIQYTVQATDKQS
RKHTKTLLTVVLEGTVFKKEEDCPDSCAMSKHLAECEECGGLGALTGRCQWRQGSGKGIT
TNYSTCTPSIKTCPDGTCDIVESKDPAICPQDCTNGNIIGGHGKGTGNLGIKSGHGICYC
FPRQNCYCEKDDIKEQFCDEVCKTVIAGAVLLSFIISVLLSSYFIHRYHKNSPKPPIASA
EMTFRRPAQSYPISYSSSNVRRPSLDSMENQVSVDTFKIPEDPKWEFPRKNLVLGKTLGE
GEFGKVVKATAFRLKGRAGYTTVAVKMLKENASQSELRDLLSEFNLLKQVNHPHVIKLYG
ACSQDGPLYLIVEYAKYGSLRSFLRESRKVGPSYVGSDGNRNSSYLDNPDERALTMGDLI
SFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGR
IPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMER
PENCSEEMYNLMLRCWKQEPDKRPTFAEISKELEKMMVKSRDYLDLAASTPSDSLLYDDG
LSEEETPLVDCNNAPLPRTLPSTWIENKLYGMSYPNWPEESPVPLTRFDGTNSVFSRYAN
DSVYANWMVSHSAAKFVDKFDS
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgtatgggcaatcttcattctcatatttcctcacagcttcctttggtctgtactttccc
agaaaggagtactcagagaatgtctacattgaccaaccagcaggtacgccgctcctgcgc
atccacgccttgagggattcccatggggaatcagcccactttcatctgtgccagaatctc
atcatttctcgagcaagatcccatgaaaatcactggtttcaaatcagagaaaaaatggga
cttctctacctcagcaagagcctagatagagaagacttcaacatgctgtctgtaggaaac
tggatgccattatcaaaggtgatgctgtatgtcttcctctcgtcccaccctttccaagag
aaggaatgtgactctgctactcgtaccacagttgtcctctctttgatcaatgctactgca
ccggcttgcagttcaatgacagcaaggcagctttgcttcacagaaatggatctctcattt
cacatcaaggagaataaacctcctggtacatttcatcagctccagctaccctcagttcat
catctgtgtcagaatctcagcattacctacaaactgttggcagctgaaggcctgcctttt
cggtacaatgagaacagcaccagtgtgagtgtaacacagcgcctagatcgagaggagaga
gagagatacgagctgatcgccaaatgcaccgtgagagaaggcttcagggaaatggaggtt
gaggtgcccttcctcatcaatgtgttagatgaagatgactctcctcccttccttcccaac
ggcactgacactgcagatgctgtcgtggagttcaacagaaaagagggaactgtccttgca
acgctaactgtgtatgatgcagacaccacacccatttatccccttgaaagcagcagaaag
aaatacacaggaacaataattactgacgatccatggataaatgaaacatttcgggtggag
cacatttttgaagaaatccactttagcccaaatggcagccaagtgaggggaactcaacat
gaatacaaactggtactgaataaaagtatttcagtcacagagcatcgttccttccagttg
gatgttctggtgaacgacacagaatttaatggtccagaaagatcagtgatgcttcatttc
aatgtctccatacttcctgtcagcattcagtttccaaacacaacttatcgcttcacagta
aaccgaaacgctcaacgttttgcacaaataggaaaagtctgcatcgaaaactgtatgaaa
ttccgtggtgtgaacatcacctacaagttgctgtcccccaatgtaagctgctatgctgtt
ggcatacttcaaggccgagaagacaaatatggaagcgtttatgtgaatgattcctctgtg
ctacttagacccgaatgcaaagaaatacaatacactgttcaagctacagacaagcagagc
aggaaacacaccaaaaccctcctcactgttgtattagaaggaactgtttttaaaaaagaa
gaggactgccctgactcctgtgctatgagtaagcaccttgctgaatgtgaagagtgtggt
ggcctgggagcgctaacaggaagatgccagtggagacaggggagtggaaaaggaatcacc
acaaactattccacatgcaccccaagtatcaagacttgtccagatggcacctgtgatatc
gtggagagcaaagatccagctatttgcccccaggactgcacaaatggaaatattattggt
ggtcatgggaaaggcactggaaatcttggaattaagtcaggacatgggatttgttactgc
ttcccgagacagaactgttactgtgagaaagatgatatcaaggagcaattttgtgatgaa
gtgtgcaagactgtgatagcaggggcagtgctgttgtccttcatcatctctgtgctgctt
tcttcctatttcatccatcgctaccacaagaattctccaaaaccacctattgcctctgca
gaaatgacattccggcgcccagcccaatcgtatcccatcagttattcttctagtaatgtc
cgtcgaccttctttagactccatggagaaccaggtgtctgtagacacctttaagataccg
gaagatccaaagtgggaattccctcggaagaacctggttctaggcaagactcttggagaa
ggagaatttggaaaggttgtcaaggcgacagctttcaggctcaaggggagagctggctat
actactgtggcagtgaaaatgctaaaagaaaatgcttcccagagcgagctgcgagatctg
ctttcagagttcaaccttttgaaacaggtgaaccatcctcacgtcatcaaactttacgga
gcctgcagtcaagatggcccgctctatttaattgtggaatatgctaaatatggctccttg
cgcagttttctcagggaaagtcgaaaagtgggaccaagctacgtgggtagtgatggcaac
aggaattcgagttatttggataaccccgatgagagagctttaacaatgggagatctgata
tcatttgcatggcagatatcacgaggaatgcagtacctggcagaaatgaagcttgtccat
cgtgacttagcagccaggaatgttctggtggccgaagggcgcaaaatgaagatctctgat
tttggcctatcccgtgatgtatatgaagaagattcgtatgtcaagaggagcaagggtcgg
atacctgttaaatggatggccatagaatccctatttgatcatatctatacaacacaaagt
gacgtgtggtcgttcggagttctgctctgggagattgtaactttgggaggcaatccttac
ccaggtattgctcctgaaagactctttaacctcctaaaaacaggctatagaatggagaga
ccagaaaactgcagtgaagaaatgtacaacctgatgctgcgctgctggaagcaagaacca
gataaaagaccaacatttgctgagatcagcaaggagctagagaaaatgatggtgaagagt
agggactacttagatcttgcggcttccaccccttctgattccttgctttatgatgatggg
ctctcagaagaggagacacctctcgtggactgtaataatgctcccctccctcgaaccctt
ccttccacatggattgaaaacaaactctatggcatgtcatacccgaactggcctgaggag
agtcccgttccactcacaagattcgatggcactaactctgtgttttcaagatatgcaaat
gatagtgtttatgctaactggatggtttcacactcagcggcaaaatttgtggacaagttt
gatagctaa
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