Lagopus muta (rock ptarmigan): 125693421
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Entry
125693421 CDS
T09141
Symbol
CACNA1C
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1C isoform X1
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04010
MAPK signaling pathway
lmut04020
Calcium signaling pathway
lmut04260
Cardiac muscle contraction
lmut04261
Adrenergic signaling in cardiomyocytes
lmut04270
Vascular smooth muscle contraction
lmut04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125693421 (CACNA1C)
04020 Calcium signaling pathway
125693421 (CACNA1C)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
125693421 (CACNA1C)
09153 Circulatory system
04260 Cardiac muscle contraction
125693421 (CACNA1C)
04261 Adrenergic signaling in cardiomyocytes
125693421 (CACNA1C)
04270 Vascular smooth muscle contraction
125693421 (CACNA1C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lmut04040
]
125693421 (CACNA1C)
Ion channels [BR:
lmut04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125693421 (CACNA1C)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
CAC1F_C
DUF4834
Motif
Other DBs
NCBI-GeneID:
125693421
NCBI-ProteinID:
XP_048801335
LinkDB
All DBs
Position
1:60343497..60822624
Genome browser
AA seq
2202 aa
AA seq
DB search
MFQAFVRQAYQPLSSHQQGESETKYKGKLVHETQLNCFYIKPGGSNYGSPRPAHANMNAN
AAAGLAPEHIPTPGAALSWQAAIDAARQAKLMGSAGNATISTASSTQRKRQQYGKQKKQG
TTTATRPPRALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPEDDSN
ATNSNLERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILE
QATKADGGNSIGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIAL
LVLFVIIIYAIIGLELFMGKMHKTCYHVQGGLIDTPAEDDPSPCAPQSAHGRQCQNGTEC
KAGWEGPKHGITNFDNFAFAMLTVFQCITMEGWTDVLYWMQDAMGYELPWVYFVSLVIFG
SFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENE
DEGMDEEKPRNRSTPAGLPDKKKEKFSWFSHSTETHVSMPTSETESVNTDNVPGTDIEGE
NCGARLAHRISKSKFSRYWRRWNRFCRRKCRAAVKSNVFYWLVIFLVFLNTLTIASEHYN
QPDWLTEVQDTANKVLLALFTAEMLLKMYSLGLQAYFVSLFNRFDCFIVCGGILETILVE
TKIMSPLGISVLRCVRLLRIFKITRYWNSLSNLVASLLNSVRSIASLLLLLFLFIIIFSL
LGMQLFGGKFNFDEMQTRRSTFDNFPQSLLTVFQILTGEDWNSVMYDGIMAYGGPSFPGM
LVCIYFIILFICGNYILLNVFLAIAVDNLADAESLTSAQKEEEEEKERKKLARTASPEKK
QEIEKTAVEEETKEEKIELKSITADGESPPATKINMDDYQPNENEEKSPYPTTEAPAEED
EEEPEMPVGPRPRPMSELHLKEKAVPMPDASAFFIFSPNNRFRVHCHRIVNDNIFTNLIL
FFILLSSISLAAEDPVRHLSFRNQVLFYFDIVFTVIFTIEIALKMTAYGAFLHKGSFCRN
YFNILDLLVVSVSLISFGIQSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIR
TIGNIVIVTTLLQFMFACIGVQLFKGKLYSCTDSSKQTEAECRGYYITYKDGEVSQPMIQ
PRSWENSKFDFDNVLTAMMALFTVSTFEGWPELLYRSIDSHMEDVGPIYNHRVEISIFFI
IYIIIIAFFMMNIFVGFVIVTFQEQGEQEYKNCELDKNQRQCVEYALKARPLRRYIPKNQ
YQYKVWYVVNSTYFEYLMFVLILLNTICLAMQHYGQSCMFKEAMNILNMLFTGLFTVEMV
LKLIAFKPKHYFCDAWNTFDALIVVGSIVDIAITEVNPAENTQCSSSMNAEENSRISITF
FRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIAL
NDTTEINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPDKKCDPESEPANSTEADHSC
GSSFAVFYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPE
AKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNATLFALVR
TALRIKTEGNLEQANEELRAIIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQEY
FRKFKKRKEQGLVGKPSQRNALSLQFAVLQAGLRTLHDIGPEIRRAISGDLTAEEELDKA
MKEAVSAASEDDIFRRAGGLFGNHVSYYQSDGRSAFPQTFTTQRPLHINKSGNNQGDTES
PSHEKLVDSTFTPSSYSSSGSNANINNANNTALCRFPSPPSYPSTVSTVEGHGTPLSPTI
RVQEAPWKLPSKRTHYYETLGRSSSRDSQLAIVCQEEVSQDETYDENLNEDIEYCSEPSL
LSTEMLAYQDDENRQLTPPENNKGEDTRHSPKKGFLCSSALGRRASFHLECLKRQKNQGV
DVSQKTVLPLQMVHHQALAVAGLSPLLQRSHSPTTFSRLCATPPATPCSRGWPQQPIPTL
RLEGAESSEKLNSSFPSVHCSSRFPDSSDCGSPRRARPVSLTVPSQTAGSSRQFHGSASS
LVEAVLISEGLMQFAQDPKFIEVTTQELADACDMTIEEMENAADNILNGNSKQSPNGNLL
PFVNCRDAGQDSAGEEEEEVQNPDCRKSQEELKDSRIYISSL
NT seq
6609 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagcctttgttcggcaagcataccaaccgctatccagccaccagcaaggggaa
tctgaaaccaagtacaaggggaagctggtgcatgaaactcagctcaactgcttctacatc
aaacctggaggttccaactatgggagtccccgtccagctcatgccaacatgaatgccaat
gcagctgcagggcttgccccagagcacatccctacaccaggggcagctctgtcctggcaa
gctgcaattgatgctgccaggcaagccaaattgatgggtagtgctggcaatgcaacaata
tccacagctagctccacgcagagaaaacggcagcagtatgggaaacagaaaaaacagggt
accacgacagctacgcgtcctccccgggcactgctgtgtttaacactgaaaaatcccatc
cggagggcatgcatcagcatcgtcgaatggaaaccatttgaaataattattttactgact
atttttgccaattgtgtggccttagctatctatatcccctttccagaagatgattccaat
gccaccaattccaatctggaacgagtggaatatctctttctcataatttttacagtggaa
gcatttttaaaagtaatagcatatggacttctctttcatcccaacgcttacctccgcaat
ggctggaatttactagattttataattgtggtagtagggctttttagtgcaattttagaa
caagcaaccaaagcagatggggggaattcaataggaggaaaaggtgccggatttgatgtt
aaagcactgcgggctttccgagtattacgtcccttacgactggtgtctggagttcctagt
ctccaggtggttttaaattcaattatcaaggccatggtccctttgttgcatattgccctg
ctggtgctgtttgtcatcattatctatgccatcattggactggaattattcatgggaaag
atgcataagacctgctaccatgtgcaaggggggctgatagatacacctgcagaagatgac
ccatctccctgtgcaccccagtctgcacatgggcggcagtgccagaatggaaccgagtgc
aaggcaggctgggagggacccaagcacggcattacaaactttgacaattttgcttttgcc
atgctgacagtgtttcagtgcatcacaatggagggatggacagatgtactctactggatg
caggacgctatgggctatgagttaccatgggtgtattttgtcagtctggtcatctttgga
tcctttttcgttctaaatctggtacttggtgtgttgagcggggaattttccaaggaaaga
gagaaggctaaggctcggggagatttccaaaagttacgggaaaagcaacagctagaagag
gatttgaagggctatttagactggataactcaagcagaagatattgacccagaaaatgaa
gatgaaggcatggatgaggagaagcctcgaaacagaagcactccagctggcttgcctgat
aagaagaaagaaaagttttcttggtttagtcactccacagaaacccatgtgagcatgccc
accagtgagaccgagtccgtgaacacagacaacgtccctggaacagatattgaaggagaa
aactgcggtgctaggctagcgcatcggatctccaaatctaaatttagtcgctattggcgc
cgatggaatcgattctgcagacgaaagtgccgtgctgctgtcaagtccaatgttttctac
tggttggtgatcttccttgtgtttctcaacacccttaccattgcttctgaacactacaac
cagccagactggctcactgaggttcaagacactgccaataaggtgctgctagctcttttc
acggcagagatgctgctgaagatgtacagccttggtctccaggcctattttgtgtccctc
ttcaaccgctttgactgtttcattgtgtgtggaggaatcctggaaaccattctggttgag
acgaagatcatgtcaccactgggcatttctgtgttgagatgtgttcggctattaagaata
tttaaaatcacaagatattggaactccctgagcaacctagtggcttcactcctgaattca
gtccgttccattgcctccctcctgctgctcctcttcctctttatcatcatcttctccctg
ctggggatgcagctttttgggggcaagtttaactttgatgaaatgcagaccaggaggagt
acatttgacaacttcccccagtctctcctcactgtgtttcagatcctgactggggaggac
tggaattcggtgatgtatgatgggatcatggcttatggcggcccctcttttccaggaatg
ttggtctgtatttacttcatcatcctcttcatctgtgggaactacatcctcctgaatgtc
tttttggccattgctgtggacaaccttgctgatgcggagagtttaacatctgcacagaaa
gaggaggaagaggaaaaagaaaggaaaaaactagctaggactgctagtcctgaaaagaaa
caggagatagagaaaacagctgtggaggaggagacaaaggaggagaaaattgagctgaaa
tcaatcactgctgatggagaatcgccacctgctacaaagatcaacatggatgactatcag
ccaaatgaaaatgaagaaaagagcccatatcccacaacagaagcaccagcagaggaagat
gaggaagaacctgagatgcctgtcggccctcggcctcgcccaatgtctgagctgcacctc
aaggaaaaggctgtgcccatgcctgatgccagcgcatttttcatcttcagtcctaacaac
aggtttcgtgtccactgccatcgaatcgttaacgataacattttcaccaacctgatccta
tttttcatcttgctcagcagcatctccttggcagctgaggaccccgtccgacacctctcc
tttaggaatcaagttctcttttattttgatatagtttttactgtcattttcaccattgaa
attgctctgaagatgaccgcatacggggctttcctccataagggctccttctgcagaaac
tatttcaacatcttagacctgctggtggtcagcgtttctctcatctcttttggaatccaa
tccagtgccatcaatgtggtgaagattttgcgtgttctgcgagtgcttagaccactgagg
gccatcaacagagccaaaggactaaagcatgtagtccagtgtgtgtttgttgccatccga
accatcggaaacattgtgattgtcaccactttgctgcagttcatgtttgcctgcattgga
gttcagttgtttaagggcaaactctacagctgcactgacagctccaagcagactgaagca
gaatgcagaggatactacatcacatacaaggatggtgaggtcagtcagccaatgatccag
ccccggagctgggagaacagcaagtttgacttcgacaatgtcttgactgccatgatggcc
ctcttcactgtctcaaccttcgagggctggccagagttgctgtataggtccattgattcc
cacatggaggatgtgggacccatctataatcacagggttgagatctccatcttctttatt
atctacatcatcatcattgctttcttcatgatgaacatcttcgttggtttcgtcatcgtc
acatttcaggaacaaggagaacaagaatacaagaactgtgagctggacaagaaccagcgc
cagtgcgtagagtatgccctgaaggcccggcccctgcggagatacatcccaaaaaatcag
taccagtacaaagtttggtatgtggtcaactccacctattttgaatacctgatgttcgtt
ttgatcctgctgaacaccatctgtctggccatgcaacactacggtcagagctgcatgttc
aaggaagccatgaacatcctcaacatgcttttcactgggctcttcactgtcgagatggtc
ctgaagttaattgccttcaaacccaagcactatttctgtgatgcatggaatacatttgac
gccttgattgttgtgggtagcattgttgatatagcaatcaccgaggtgaacccagctgaa
aatacccaatgctcttcctctatgaacgcagaggaaaactctcgcatctcaatcaccttc
ttccgactcttccgtgtgatgcgtcttgtgaagctcctgagccgaggggagggcatccgg
acactgctttggaccttcatcaaatccttccaggctctcccctatgtggctcttctaata
gtgatgttattcttcatctacgccgtgatcgggatgcaggtatttggtaaaattgcgctg
aacgataccacagaaatcaaccgcaacaacaacttccagaccttcccccaggcggtgctg
ctgcttttcaggtgtgccaccggtgaggcctggcaggaaatcatgctggcgtgtctccca
gacaagaagtgcgacccagagtcagagccggccaactccactgaagctgaccactcctgt
ggcagcagcttcgctgtcttctacttcataagcttctacatgctctgtgccttcctgatc
atcaatctttttgtagctgttataatggataacttcgattacctgacacgggactggtcc
attttaggacctcaccacctagatgagtttaaaaggatctgggcagagtatgaccctgaa
gccaagggacggatcaagcacttggacgtggtgacattgctccggcggattcagcctcca
ctgggcttcgggaagctttgccctcaccgagtggcttgcaaacgccttgtctccatgaat
atgccactgaacagcgatggaactgtcatgttcaatgccactctctttgcactggtcaga
actgcactgaggatcaagacggaaggtaacctggagcaagccaatgaagagcttagagca
ataattaagaaaatctggaagcgcaccagtatgaagttgctggaccaggtggtgcctcct
gcaggtgatgatgaggtgactgttgggaagttctacgccactttcctgattcaagagtat
ttccggaagttcaagaaacgcaaagagcagggcctggtgggcaagccttcccagcgcaac
gcactctccttgcagtttgctgttttgcaggctggtttgcgcacacttcacgacattggt
ccagagatccgacgagcaatctctggagacctgacagctgaagaagagctagataaggct
atgaaagaagctgtttctgctgcctctgaagatgatatcttccggagagccggaggcttg
tttggaaaccatgtcagctattaccaaagtgatggcaggagtgcgttcccccagacattc
accacccagcgacctttgcacatcaataagtctggcaacaaccagggagataccgagtct
ccatctcatgagaagttggtggactccaccttcactcccagcagctactcatcttcaggc
tccaatgcaaacatcaacaatgccaacaacactgccctgtgccgcttcccaagcccaccc
agctaccccagcactgtcagcacagtggaaggccatgggactccattgtcgcccaccata
cgtgtgcaagaagctccttggaaattaccatccaaaaggacgcactactacgaaacattg
ggacgctccagttccagagacagccagctggcaattgtttgccaagaggaagtgtctcag
gatgagacttatgatgaaaatttgaatgaagacattgagtactgtagtgaaccaagtctg
ctctctactgaaatgctcgcataccaagatgacgaaaacagacaacttactccaccagaa
aacaacaaaggagaggacacccggcactctccgaagaaagggtttctgtgctcctcagca
ctaggccgacgagcatcttttcacttagagtgtctgaaaagacagaaaaaccagggcgta
gatgtctcgcagaagacagttctgcctttacaaatggtacatcatcaggcattggcggtg
gccggcctgagccccctcctccagcgaagccattcccccaccacgttctcccggctgtgc
gccacaccacctgctacaccctgcagccgaggctggccacagcagcccatcccaacgctg
cgcctcgagggagctgagtccagcgagaagctcaatagcagcttcccctccgtgcactgc
agctccaggttccccgacagctctgactgtggcagcccaagaagagccaggccggtgtcc
ctcaccgtccccagccagacagcggggagcagcaggcagttccacggcagcgccagcagc
ctggtcgaagcggtattgatttcggaaggactgatgcagtttgctcaagatccaaagttc
attgaggtcacgacccaggaactcgctgatgcttgcgacatgacgatagaagagatggaa
aacgcagcagacaacattctcaatggtaacagcaagcagagccccaatggcaacctgttg
ccttttgttaactgcagggacgcagggcaggacagtgcaggcgaggaagaggaagaggtg
cagaacccggattgtagaaaaagtcaggaggagctgaaggacagcaggatttatatcagc
agcctgtag
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integrated database retrieval system
