Lagopus muta (rock ptarmigan): 125693556
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Entry
125693556 CDS
T09141
Symbol
CXCL12
Name
(RefSeq) stromal cell-derived factor 1
KO
K10031
C-X-C motif chemokine 12
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04060
Cytokine-cytokine receptor interaction
lmut04672
Intestinal immune network for IgA production
lmut04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
125693556 (CXCL12)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
125693556 (CXCL12)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
125693556 (CXCL12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lmut04052
]
125693556 (CXCL12)
00536 Glycosaminoglycan binding proteins [BR:
lmut00536
]
125693556 (CXCL12)
Cytokines and neuropeptides [BR:
lmut04052
]
Cytokines
Chemokines
125693556 (CXCL12)
Glycosaminoglycan binding proteins [BR:
lmut00536
]
Heparan sulfate / Heparin
Chemokines
125693556 (CXCL12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
125693556
NCBI-ProteinID:
XP_048801636
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All DBs
Position
5:complement(49360892..49378227)
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AA seq
131 aa
AA seq
DB search
MDLRALALLAFALAVISLSEEKPVSLTYRCPCRFFESNVARANIKHLKILSTPNCSLQIV
ARLKSNSKQVCIDPKLKWIQEYLEKALNKPRHRTHKKKQQKKRGPLCPSRATPLKSPGRK
NGGSRCKRQAL
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atggaccttcgcgctctggctctgctcgcctttgccctggcggtcatctccctgtctgag
gagaagcccgtcagcctgacgtaccgatgcccctgtcgattcttcgagagcaacgtggcg
agagccaacattaaacacctcaaaatcctctccacccccaactgctcacttcagattgtt
gcaaggctcaagagcaacagcaagcaagtgtgcattgatcccaagctaaagtggatccag
gaatatctggaaaaagctttaaacaaaccacgtcatcgcactcataaaaaaaagcaacag
aagaaacggggcccactctgcccttcccgtgcaacaccactaaagtctccagggagaaag
aatggaggttcaagatgtaagaggcaagcattgtaa
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