KEGG   Lagopus muta (rock ptarmigan): 125693556
Entry
125693556         CDS       T09141                                 
Symbol
CXCL12
Name
(RefSeq) stromal cell-derived factor 1
  KO
K10031  C-X-C motif chemokine 12
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut04060  Cytokine-cytokine receptor interaction
lmut04672  Intestinal immune network for IgA production
lmut04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    125693556 (CXCL12)
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    125693556 (CXCL12)
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    125693556 (CXCL12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:lmut04052]
    125693556 (CXCL12)
   00536 Glycosaminoglycan binding proteins [BR:lmut00536]
    125693556 (CXCL12)
Cytokines and neuropeptides [BR:lmut04052]
 Cytokines
  Chemokines
   125693556 (CXCL12)
Glycosaminoglycan binding proteins [BR:lmut00536]
 Heparan sulfate / Heparin
  Chemokines
   125693556 (CXCL12)
SSDB
Motif
Pfam: IL8
Other DBs
NCBI-GeneID: 125693556
NCBI-ProteinID: XP_048801636
LinkDB
Position
5:complement(49360892..49378227)
AA seq 131 aa
MDLRALALLAFALAVISLSEEKPVSLTYRCPCRFFESNVARANIKHLKILSTPNCSLQIV
ARLKSNSKQVCIDPKLKWIQEYLEKALNKPRHRTHKKKQQKKRGPLCPSRATPLKSPGRK
NGGSRCKRQAL
NT seq 396 nt   +upstreamnt  +downstreamnt
atggaccttcgcgctctggctctgctcgcctttgccctggcggtcatctccctgtctgag
gagaagcccgtcagcctgacgtaccgatgcccctgtcgattcttcgagagcaacgtggcg
agagccaacattaaacacctcaaaatcctctccacccccaactgctcacttcagattgtt
gcaaggctcaagagcaacagcaagcaagtgtgcattgatcccaagctaaagtggatccag
gaatatctggaaaaagctttaaacaaaccacgtcatcgcactcataaaaaaaagcaacag
aagaaacggggcccactctgcccttcccgtgcaacaccactaaagtctccagggagaaag
aatggaggttcaagatgtaagaggcaagcattgtaa

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