Lagopus muta (rock ptarmigan): 125694526
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Entry
125694526 CDS
T09141
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04620
Toll-like receptor signaling pathway
lmut04621
NOD-like receptor signaling pathway
lmut04622
RIG-I-like receptor signaling pathway
lmut05164
Influenza A
lmut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125694526 (TRAF3)
04621 NOD-like receptor signaling pathway
125694526 (TRAF3)
04622 RIG-I-like receptor signaling pathway
125694526 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
125694526 (TRAF3)
05168 Herpes simplex virus 1 infection
125694526 (TRAF3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
Cast
MPS2
ATG16
Sina_ZnF
zf-C3HC4
CEP104_ZnF
Med28
FliJ
Spc29
KxDL
GAS
DUF1664
Crescentin
SPATA24
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
125694526
NCBI-ProteinID:
XP_048803849
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All DBs
Position
6:49676347..49745845
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AA seq
567 aa
AA seq
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MDTSKKTEPPLSVEMVQQRANPDRSPSASIYVPEQGGYKEKFVNAVEDKYKCEKCHFILC
NPKQTECGHRFCETCMNALLSTPSPKCTACQESIVKDKVFKDNCCRRELLALQIYCRNEN
KGCKEQLSLGQLLMHLKTDCQFEELACPRADCKEKILRKDLPDHVEKTCKYRETTCKYCK
SQVPMIMLQKHEDTDCPCVMVSCPHKCSVKTLMRSELNAHLSECINAPSTCSFKRYGCTF
QGTNQQIKAHEASSAVQHVNLLKEWSNALENKVALLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTAGQGARNTSMLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagtaagaagacagaaccccctttatctgtagaaatggtacaacaaagggcc
aatcctgatcgtagtccttcagcatccatttatgttccagagcaaggtggctacaaagag
aaatttgtaaatgctgtggaggataagtataaatgtgagaaatgtcacttcatcttatgc
aatcctaagcagactgaatgtggacaccgattctgtgagacttgcatgaatgctttgctg
agcactccgagtccaaaatgtacagcatgtcaagaaagcatagtaaaagacaaggtattt
aaggataattgttgcaggagagaactacttgcccttcagatatactgcagaaatgaaaac
aagggctgcaaagaacaactttccttgggtcaattactgatgcatttgaaaactgattgt
cagtttgaagaacttgcgtgtcctcgtgctgattgtaaagaaaaaatactgagaaaagat
ttgccagaccatgtagagaagacctgtaaataccgggagacaacttgtaaatactgtaaa
agccaagtcccaatgattatgttgcagaaacatgaagatacagactgcccgtgtgtcatg
gtttcatgtcctcataaatgcagtgttaaaacactcatgaggagcgagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaaccaacaaattaaagcacatgaagccagctcagcagtgcagcatgttaac
ttattgaaagagtggagcaatgctctagaaaataaggtggccttgctccagaatgaaagt
ttggaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaa
attgaaagacagaaggaaatgctacggaataatgaatctaaaatacttcatttacagcga
gtgatagacagtcaagcagagaaactgaaagaactggacaaagaaatccgtcccttccga
cagaactgggaggaggctgacagcatgaagagcagtgtagaatccctccagaatagagtg
actgagctggaaagtgttgacaaaactgcagggcaaggagctcgaaatacaagcatgcta
gagacacagctcagcaggcacgaccagatgctgagtgttcacgacattcggctggctgac
atggacctccgattccaagttttagaaactgctagttacaatggagtgttaatttggaag
attcgagattataaacgtcggaagcaagaggcagtcatggggaagactctgtccttgtac
agccaacccttttacactggatactttggctacaagatgtgtgccagagtttaccttaat
ggagatggcatgggcaaggggacgcacttgtcgctgttttttgtcataatgcgtggagaa
tatgatgcgttgcttccttggccatttaaacagaaagtgactctcatgctaatggatcag
ggtccgtctcggcgccacttaggagatgctttcaagccagatccaaacagtagcagtttc
aagaagccaactggagaaatgaacattgcgtctggctgcccagtctttgtggctcaaact
gttctagagaatggaacgtatattaaagatgatactatttttattaaagtcatagtggat
acgtcggatctaccagacccctga
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