Lagopus muta (rock ptarmigan): 125694608
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Entry
125694608 CDS
T09141
Symbol
ABCD4
Name
(RefSeq) lysosomal cobalamin transporter ABCD4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut02010
ABC transporters
lmut04146
Peroxisome
lmut04977
Vitamin digestion and absorption
lmut04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125694608 (ABCD4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125694608 (ABCD4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
125694608 (ABCD4)
04980 Cobalamin transport and metabolism
125694608 (ABCD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125694608 (ABCD4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lmut02000
]
125694608 (ABCD4)
Enzymes [BR:
lmut01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
125694608 (ABCD4)
Membrane trafficking [BR:
lmut04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
125694608 (ABCD4)
Transporters [BR:
lmut02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
125694608 (ABCD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
SbmA_BacA
ArsP_1
AAA_22
AAA_7
NACHT
IRK
Motif
Other DBs
NCBI-GeneID:
125694608
NCBI-ProteinID:
XP_048804095
LinkDB
All DBs
Position
6:complement(37696301..37709567)
Genome browser
AA seq
618 aa
AA seq
DB search
MEGDGARIRGAGAGGRPRPRLDLLFVRRFLRIQAVLFPKWPSPNALMFLTLLGVAVLEQL
VIYQVGVIPSQYYEVLGNKDFSGFQALTAIALTMIVVNSTLKSFDQFICNLLYVSWRKSL
TEYLHNCYFQGQVYYSLHILHEDIDNPDQRISQDVERFCRQLSSMASKLVISPFTLAYYT
YQCFHSTGWLGPVSIFGYFVIGTIINKMLMSPIVSKLVQQEKLEGDFRFKHMQIRVNAEP
AAFYRAGRVEHMRTDRRLQSLLQTQRELIGKELWLYIGINTFDYLGSILSYVIIAIPIFS
GVYGDLSPTELSSLVSKNAFVSIYLISCFSQLIDLSSTVTDVAGYTHRIGELQETLLSLG
RRENERYSEAKDWDSDSSDSGEDSEPRDTAFLLEQVTLSVPSSGKLLIKDLSLRISQGDS
MMIMGNTGTGKTSLLRVLGGLWESTQGNVQMLTCFGPRGVVFLPQRPFFTDGSLREQVIY
PLKEIYPVSGSADDERIVQFLELAGLTDLLARAGGLDKQVDWNWYDVLSPGEMQRLSFAR
LFYLQPRYAVLDEATSALTEEVEHDLYRVCLQLGMTLISVGHRASLKKFHNWILKLHGGG
KWELTRCEKMKRPPSWEE
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggagggagacggcgcccgaattcggggcgccggggccggcggccggccccggccccgg
ctcgacctgctgttcgtgcggcgcttcctgaggatccaggccgtgctgtttcccaaatgg
ccctcccctaacgcactgatgttcctgacgctgctcggcgtggccgtgctggagcagctg
gttatctatcaggtcggtgtgatccccagccagtactacgaggtgctggggaacaaggac
ttctctggattccaagcgctgaccgccatcgctctgaccatgattgtagtgaattccacg
ctaaaaagcttcgaccagtttatctgcaacctgctgtatgtgagctggaggaaatctctc
actgaatacctgcacaactgctacttccagggccaagtttactacagcctgcacattctg
cacgaggacatcgataacccggaccagcggatcagccaggatgtggagaggttctgcagg
caactcagctccatggccagcaaactcgtcatctctcccttcacactggcatactacaca
taccagtgctttcacagcacaggctggctaggccctgtgagcatcttcgggtatttcgtc
attgggacaatcattaacaagatgttgatgagcccaattgtgtctaaacttgtgcagcag
gaaaagctggagggggatttcaggttcaagcacatgcagattcgtgtcaatgcagagcca
gctgctttctatagggccgggcgagtggagcacatgcgcactgaccgcaggctgcagagc
ctgctgcagacccagagggagctgataggcaaggagctgtggctctacattggcatcaac
acctttgactacctgggcagcatcctgagttacgtgatcattgccattcctatcttttct
ggggtctatggtgacctgagtccaacagaactcagttccttggtcagcaagaatgccttt
gtttccatctacctcatcagctgcttcagccagcttatagatctctccagcactgtgacc
gacgttgctggctacacacacaggattggtgaactgcaggagaccttgctgagccttggc
agaagagaaaatgaaaggtactcggaagccaaagactgggactcagacagcagtgactct
ggggaggactcggagccaagggacacagctttccttctggagcaagtgacgctctcagtg
ccatcctctggcaagctactcatcaaggacctgagcctcaggatctcacaaggagacagc
atgatgatcatggggaatactggcacagggaagacatctctcctgagggtcctcggtgga
ctctgggagagcacacaggggaatgtccagatgctgacctgctttggcccccgaggagtg
gtgttcctgccgcagaggccgttcttcactgatggcagcttgcgtgagcaggtgatttat
cctctgaaggagatctatccagtttcaggatctgcggatgatgagagaattgtgcaattc
ctggagctggcagggctgactgatttgctggcaagggctggtggactggacaagcaggtg
gactggaactggtatgatgtgctgtccccaggtgagatgcagaggctctcgtttgcacgg
ctcttctaccttcagccaagatatgcggtactagatgaagccaccagtgccttgacagaa
gaggtggaacatgacctgtaccgtgtgtgccttcagctgggcatgactctgatcagcgtg
ggacacagggccagcctgaagaagttccacaactggattttgaaacttcatggaggggga
aaatgggaactcactcgatgtgagaagatgaagcggcctccatcctgggaagaatga
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