Lagopus muta (rock ptarmigan): 125694644
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Entry
125694644 CDS
T09141
Symbol
EXD2
Name
(RefSeq) exonuclease 3'-5' domain-containing protein 2
KO
K20777
exonuclease 3'-5' domain-containing protein 2 [EC:
3.1.11.1
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmut03400
]
125694644 (EXD2)
Enzymes [BR:
lmut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
125694644 (EXD2)
DNA repair and recombination proteins [BR:
lmut03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125694644 (EXD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PP_M1
RRXRR
Cas_CXXC_CXXC
Motif
Other DBs
NCBI-GeneID:
125694644
NCBI-ProteinID:
XP_048804140
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Position
6:complement(27947316..27965076)
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AA seq
621 aa
AA seq
DB search
MPRQAAVPVALAALLGIAAGGLVLWKAAQRRSGRARCGRLREEAAGERPEEKESEAGGRE
ALPLFASPTLSWVERSLGADIVIVSERQEWDQVEPLLKKELEKWPVLGMDCEWVSVEGKA
NPVSLLQMASSSGLCILVRLPRLVASGQPIPKTLLDIMADDAVLKVGVGCWEDACKLLQD
YSLPVKGSVDLRYLAMRQRKDLLHNCLSLKSLAEKVLNCPLDKSPHMRCSNWEAEELTQD
QVLYAARDAQVSVALFLHLLGFACLPATSKGENSVSIWEKVLSKCQGLVDIPFKGRKSGS
TGEDKSGEARSPQKGKNRKSLVNVHSSGSQQVRDPRRQKRKPLGVGYSARKSPLYDNCFL
HAPDGQPLCTCDRKKAQWYLDKGIGDLVSKDPFVVKLRFEPSGRPESEVDYYLMVKENLC
VVCGKRESYIRKNIVPHEYRRHFPIQMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAEE
FGAPIGSEEGVRLLEDPLRRQVRSGARALLNADSLPDPRKAELLQGIKDFFNVEAVTPEM
LQEAAGLETRICNESYMPHGLKVVQCCAKGGLRSLMQLERRWRQHFLDSMQPKHLPEQWS
VDHNHTKLIRKYGEDLQVELS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggcaggcggccgtgcccgtggctctggcggccttgctgggtatcgccgcgggg
gggctggttctgtggaaggccgcccagcgccggagtggcagagcgcgctgcgggcgcctg
cgggaggaggcggcgggggagcggccggaggagaaagaaagcgaggcggggggcagagaa
gcgctgcccctgttcgcgtcccccaccctttcctgggtggaaaggagcctcggcgcagat
atagtgatcgtgtcggagcggcaggagtgggaccaggtggagcctttgctgaagaaggag
ctggagaagtggccggtgcttggaatggactgcgagtgggtatctgtggagggaaaagca
aatcccgtatccctcctacagatggcttcttccagtggcctttgcattcttgttcggttg
cccaggcttgttgccagtggacagcctatcccaaagaccctcctggacatcatggcagat
gatgctgtgttgaaagtaggagtaggatgctgggaagacgcctgcaagttacttcaggat
tatagtcttccagtcaaagggagtgtggatctccggtatttagccatgaggcagcggaag
gatctacttcacaactgccttagccttaagtctttagctgaaaaagtcctgaactgcccg
cttgacaagtctcctcatatgcgttgcagcaactgggaggcagaagaactgacacaagat
caggttctctatgctgctagagatgcccaggtctcggtggctctgttcctccatttgctg
ggatttgcctgtctccctgctacatctaaaggtgaaaactctgtttccatttgggaaaaa
gtattgagtaaatgccaaggcttggtggatatcccatttaaaggaagaaaaagtggcagc
acaggagaggacaagagtggagaggcacgttctcctcagaaaggaaagaatcggaaatct
ttggtgaatgtccattcctctggcagtcagcaagtgagagatcctcggaggcaaaagcga
aagcctctgggtgtgggatattctgcaagaaaatctccactgtatgacaactgctttctg
catgcaccagatggacagcccttgtgcacttgtgatcgcaagaaagctcagtggtatctg
gacaaggggattggagatctagttagcaaagacccatttgttgtgaagctgcggtttgag
ccttcaggacgtcctgagtctgaagttgattattatctgatggttaaagaaaacctgtgt
gttgtatgtggcaaacgggagtcctatattcgaaagaacattgttcctcacgagtatcga
aggcacttccccattcagatgaaggaccacaactcccatgacgtgctcctactctgcacc
tcctgccatgccatctccaattactatgacaaccatctcaagcagcagctggctgaggag
tttggtgctcctattggctctgaagaaggagtgcgtctgctggaggaccctctgcgcagg
caggtgcgctccggggcccgagctctgctgaatgcagacagcctgccagaccctcgaaag
gcagaactcctacaaggcatcaaggacttctttaacgtagaagctgtgaccccagagatg
ctgcaggaagcagctggtctagaaaccaggatctgcaatgagagctacatgccacatgga
ctgaaggtggtacagtgttgtgctaaaggaggcctgcgctccctcatgcagttggagaga
cgctggcggcagcatttcttggacagcatgcagcccaaacatctcccagagcagtggtca
gtggaccacaaccacacgaagctgatccgaaagtatggggaggatcttcaggtcgagctg
tcatga
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