Lagopus muta (rock ptarmigan): 125696707
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Entry
125696707 CDS
T09141
Symbol
RAPGEF4
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04081
Hormone signaling
lmut04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
125696707 (RAPGEF4)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
125696707 (RAPGEF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125696707 (RAPGEF4)
Membrane trafficking [BR:
lmut04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
125696707 (RAPGEF4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
RA
Motif
Other DBs
NCBI-GeneID:
125696707
NCBI-ProteinID:
XP_048808701
LinkDB
All DBs
Position
8:19424759..19569288
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AA seq
1026 aa
AA seq
DB search
MVAAHTSHSASSGEWIACLDKRPLERSSEDVDIIFTRLKEVKAFEKFHPNLLQQICLCGY
YENLEKGITLFRQGDIGSNWYAVLTGSLDVKVSDTSNHQDAVTICTLGIGTAFGESILDN
TPRHATIVTREYSELLRIEQKDFKALWEKYRQYMSGLLTPPYGVMETGSNNDRMPDKDSM
SSGALCQVSKNYSKTPLIDSHIPHRPSKTITQVPSEKILRAGKILRNTILSRAPHMIRDR
KYHLKTYRQCCVGTELVDWMMQQSTCVHSRSQAVGMWQVLLEEGVLNHVDQEHYFQDKYL
FYRFLDDEREDAPLPTEEEKKECDEELQDTMLLLSQIGPDAHMRMILRKPPGQRSIDDLE
IIYEELLHIKALSHLSTTVKRELAGVLIFESHPKAGTVLFNQGEEGTSWYIILKGSVNVV
IYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTV
RLKEHDQDVLVLEKIPAGNRVSNQGSSQPQHKYIVMSGTPEKILEHFLETMRLEATLNEA
TDSVLNDFIMMHCVFMPNSQLCPALMAHYHAQPSQGTEQEKMDYSLNNKRRVIRLVLQWA
ALYGDLLQEDEAAMAFLEEFYVSVSDDTRMIAALKEQLPELEKIVKQVAEEPKAPQKKHK
VLLQLFNTSDDRAQKRQPIRGSDEVLFKVYCIDQTYTTIRVPVSSSVKEVISAVADKLGS
GEGLIIVKMSSGGEKVVLKPHDVSVFTTLSVNGRLFACPRDQFDSLAPLPEQEGPSVGTV
GTFELMSSKDLAHQMTIYDWELFNCVHELELIYHTFGRHNFKKTTANLDLFLRRFNEIQF
WVVTEICLCSQLSKRVQLLKKYIKIAAHCKEYKNLNSFFAIIMGLSNVAVSRLSLTWEKL
PSKFKKIYAEFESLMDPSRNHRAYRLTVAKLDPPIIPFMPLLIKDMTFTHEGNKTLTDNL
VNFEKMRMIANTVRTVKFCRSQSFNPDAALANKNHQDVRSYVRQLNVIDNQRTLSQMSHR
LEPRRA
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccgctcacacctcccattccgcgtcctctggcgagtggatcgcgtgcctggat
aaaagacctttggaacgttccagtgaagatgtagatataatattcacacgactgaaagaa
gtgaaagcctttgagaaatttcatccaaaccttctgcagcagatatgtctgtgtggatat
tatgaaaatctggaaaaggggatcacattgttccgtcaaggtgatattgggtcgaactgg
tatgctgttctgacaggatcactggatgtgaaggtttctgatacaagcaaccaccaggat
gctgtaacaatatgcactctgggaataggaactgcttttggagagtccattctggataac
actcctcgccatgctaccatcgttaccagagaatatagcgagctccttcgaattgagcag
aaggacttcaaagcactttgggagaaataccgacagtatatgtctggacttcttactcct
ccttatggtgttatggaaactggctccaacaatgacagaatgccagataaggacagtatg
tcaagcggtgctctttgccaagtttctaaaaattatagtaagacacctcttattgactct
cacattccacatcgtccctctaaaaccattacacaggttccttcagaaaagatcctcaga
gctggaaagattttgcggaataccatcctgtcccgagcccctcacatgataagagatcgt
aaatatcatctgaagacttacaggcaatgctgcgtgggaacagaacttgttgactggatg
atgcagcaaagtacttgtgtccattcaagaagtcaggctgttggcatgtggcaagtattg
ctggaagaaggcgttcttaaccatgtggaccaggagcactactttcaggacaaatactta
ttttatcggtttttggatgatgagcgtgaagatgcccctttgccaacagaagaagagaaa
aaggagtgtgatgaggagctacaggacactatgctgcttctgtctcagattgggccggat
gctcatatgaggatgattctcagaaaaccgcctggtcagagaagtatagatgatttagaa
attatatacgaagaacttcttcacattaaagccttatctcatctttctaccacagtaaag
cgagaattagcaggtgtcctcatttttgagtcgcatcccaaagctggaacagtcttattt
aatcagggagaagaaggtacatcttggtacattatcctaaagggatcagtaaacgtagtc
atttatggcaagggtgtggtatgtactctacatgaaggagatgattttggcaagctagca
cttgtgaatgatgctcccagagcagcatctatcgttctacgtgaagacaactgccacttc
ttgagagtagacaaagaggacttcaacagaatccttagggatgtggaagcaaatactgtg
aggctcaaagaacatgaccaggatgtcttggtgttggagaagatcccagcaggaaacaga
gtttctaatcaaggaagttcacagcctcaacacaaatatattgtgatgtcaggaactcct
gagaaaattttagagcactttctagaaactatgcgccttgaagcaactttaaatgaagca
acagattctgttttaaatgattttattatgatgcactgtgtttttatgccaaatagtcag
ctctgcccagccttgatggcacattatcatgcccagccttcccagggtacagagcaagag
aaaatggattattctctcaacaataaaaggcgagtcattcgactggttcttcagtgggct
gctttatatggagatttgctacaagaggatgaagcagcaatggcctttttggaggaattt
tatgtatctgtgtcagatgataccagaatgattgcagcactaaaggagcaacttccagag
ctagagaaaattgtaaagcaagtagctgaggaacctaaagcaccacaaaagaagcacaaa
gttcttctgcagctgtttaacacaagtgatgacagagcacagaaacgccaacctatcagg
ggcagtgatgaagttctttttaaggtgtactgcatagaccaaacctataccactatccgc
gtgccggtgtcttcgtctgtgaaggaagtaatcagcgcagtagcagataagctgggttct
ggagaaggccttatcatagtaaagatgagttcaggaggagaaaaagtcgtgctcaagcct
catgatgtttcagtgtttacaactctcagtgttaatggacgactctttgcttgcccacgt
gaccagtttgattcactggcaccattaccagaacaagagggaccatcagttggtacggtt
ggaacgtttgagctgatgagctccaaagacctcgcacatcagatgacaatttatgactgg
gagctcttcaactgtgtgcatgagctggaactgatctatcacacttttggaaggcacaat
ttcaaaaagaccacagcaaatctggatttatttttaagaagatttaatgaaattcagttc
tgggtggtcactgagatttgtctttgctctcaactcagcaagcgtgtgcagctactgaag
aaatatattaagatagctgcccactgtaaagaatacaaaaatctgaattcctttttcgct
attattatgggactgagtaatgttgccgtgagccgtctttcactgacatgggagaaactt
ccaagcaagttcaagaagatctatgcagaatttgaaagcttaatggatccatcaagaaac
catagggcctacagactgacagtagctaaattggatcctccaataattcctttcatgcct
ctacttataaaagacatgacgtttactcatgagggaaataagacactcaccgacaatcta
gtaaacttcgaaaagatgcgcatgattgccaacactgtcaggacggtgaagttctgccga
agtcaatctttcaatcctgacgcagccctagctaataagaaccatcaggatgttcggagc
tatgtgaggcaattaaatgtgattgacaaccagagaactttatcacagatgtctcaccga
ctggagccgcgtcgggcataa
DBGET
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