Lagopus muta (rock ptarmigan): 125698541
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Entry
125698541 CDS
T09141
Symbol
IFT122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
KO
K19656
intraflagellar transport protein 122
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lmut03037
]
125698541 (IFT122)
Cilium and associated proteins [BR:
lmut03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
125698541 (IFT122)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_IFT122_2nd
Beta-prop_IFT122_1st
Zn_ribbon_IFT122
Zn_ribbon_IFT122_C
Beta-prop_EML_2
TPR_IF140-IFT172
TPR_GEMI5
WD40
TPR_IFT80_172
WD40_WDHD1_1st
WD40_CDC20-Fz
TPR_7
EIF3I
WD40_Prp19
TPR_COPA_B
Beta-prop_IFT140_2nd
Beta-prop_HPS5
TPR_12
PEP5_VPS11_N
Zf_2nd_IFT121
TPR_2
Motif
Other DBs
NCBI-GeneID:
125698541
NCBI-ProteinID:
XP_048812924
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Position
11:19406613..19436429
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AA seq
1033 aa
AA seq
DB search
MSNGVISIRNKNGDEKVKIERAGAASSPIWSICWNPSRDERNDTLAVADWGQRLSFYQLS
GKQIGKDRMLNFDPCCVSYFTKGEYILLGGSDKQVSLFTKDGVRLGTIGEQSSWVWTCKA
KPDSNYVAVGCQDGTISFYQLIFSTVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKGRE
LVKKIAIYKNRLAIQMPEKILIYELYSDDSSDMYYRVKEKIVKKFECNLLVVCSDHIILC
QEKRLQCLSFSGVKEREWLMESLIRYIKVIGGPPGREGLLVGLKNGQILKIFVDNVFAIV
LLKQSTAVRCLDMSASRNKLAVVDENDTCLVYDIHTKELLFQEPNANSVAWNTQCEDMLC
FSGGGYLNIKAGNFPVHQQKLQGFVVGYNGSKIFCLHVFSMSAVEVPQSAPMYQYLERKM
FKEAYQIACLGVTDADWRELAMEALEGLEFETAKKAFTRIRDLRYLELISSIEERKKHGE
NLTELFLADVYAYQGKFHEAAKLYKKSGHESLALDMYSDLRMFDYAKDFLRSGDPKDTKM
LMKKQADWAKNINEPKAAVEMYLSAGEHMKAIEISGDHGWVDMLIEIARKLDKAEREPLS
KCAFYFKKLNNPGYAAETYMKVGDLKALVSLHVETHRWEEAFALSEKHPEFKDEVYVPYA
QWLAENDRFEEAQKAFHKAGRQREAVRVLEQLTHNAVVESRFNDAAYYYWMLSMQCLDIA
QENEDQKTAMLQKFHHFQQLAEVYHVYHYIQRYTEEPFSFHLPETLFNISRFLLHSLTKE
TPLGISKINTLFTLAKQSKALGAYKLARHAYDKLQGLQIPARFQKSVELGSLTIRSKPFH
DSEELVPLCYRCSTNNPLLNNLGNVCINCRQPFVFSASSYEVLHLVEFYLEDGITDEEAV
SLIDLEAPRLNKSGNKWQEMMSDDAQSLRLHDSAVIEDDDPFTAKLSFEQGGSEFVPVVV
NRAVLRSMSRRDVLIKRWPRPLRWQYYRSLLPDASITMCPSCFQMFHTEDYELLVLQHNC
CPFCRRRIDESNQ
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacggagtcatcagcatacggaataaaaatggtgatgagaaagtgaaaatagag
cgtgccggggctgcctcatctccaatatggtccatttgttggaatccatccagagatgaa
cgcaacgatactttagctgtggcagactggggtcaaaggctttccttttatcagctaagt
ggcaaacagattgggaaggacaggatgctcaattttgacccttgctgtgtcagctatttt
acgaagggagagtacattttgctgggaggctcagataaacaagtttccctcttcacaaag
gatggtgtccgtcttggaaccataggagagcaaagcagctgggtgtggacttgcaaagct
aaaccagactccaactatgtggccgtgggctgccaggacggcaccatatccttctatcag
ctgattttcagcactgttcacggcctgtacaaagatcgctatgcttacagagacagcatg
actgacgtgatcgtccagcacctcatcacggagcagaaagttagaataaaaggcagagag
ctggtgaagaaaatcgccatctacaagaacagattagccatccaaatgccagagaagatc
ctgatttatgagctgtattcggatgattcctcagacatgtattatcgtgtgaaggaaaag
atagttaagaaatttgaatgcaacttgctggttgtatgctcagatcacattattttatgc
caggagaaaaggttgcagtgcctctcatttagtggtgttaaagaacgagagtggctgatg
gagtctcttatccgttacatcaaagtaattggaggacccccggggagagaaggcctcttg
gttggtctaaagaacgggcagattctgaagatatttgttgataatgtctttgccatcgtc
ctgctgaaacaatccacagctgtgcgctgtctggatatgagcgcatcccgcaacaagctg
gcagtggttgatgagaacgacacctgcctggtgtatgatattcataccaaagagctgttg
ttccaggaacccaatgctaatagcgtggcttggaatactcagtgtgaggatatgctttgc
ttttctggagggggttacctcaatatcaaagctggtaatttccctgtccatcagcaaaaa
cttcaaggctttgttgtgggatacaacggctccaagatcttctgtcttcacgttttttct
atgtcagctgttgaagttccgcagtctgcacccatgtatcaatatctggaacggaaaatg
tttaaggaagcgtatcagatcgcgtgtttgggagtaactgatgctgactggagagaactg
gccatggaagccctggaagggctggagtttgaaacagctaaaaaggcgtttaccagaata
cgagaccttagatatttagagttgatcagcagcattgaggagcggaagaagcacggggag
aacctcactgagttgttcctggcagatgtttatgcctaccaaggaaagttccatgaggca
gcaaaactgtacaaaaagagtgggcatgaaagcctagctctggacatgtactcggacttg
cgcatgtttgactacgccaaggattttctccgatccggagaccccaaagacacaaagatg
cttatgaaaaaacaagcagattgggccaagaacattaatgagccaaaagcagctgtggag
atgtacctttctgcaggcgagcacatgaaggccatagaaatcagtggggaccacggctgg
gtcgatatgttaatagaaattgctcggaaactggataaagctgagcgtgagcctctgtca
aaatgtgccttctattttaagaagctcaataaccccggctatgcagcagaaacctacatg
aaggttggtgacctgaaagcgttggtctctctccacgtggagacgcaccgctgggaagag
gcatttgctttgagtgaaaagcatcctgaattcaaagatgaggtctatgtcccttatgct
cagtggctagcagagaatgatagatttgaagaagcccaaaaagcattccacaaggctggc
aggcagagagaagctgtgagagtgctggagcagctaacgcacaatgctgtggttgaaagc
cgatttaacgacgcagcctattattattggatgctttccatgcagtgtttagatatagcc
caagagaatgaagatcagaagactgcaatgttgcagaagtttcatcacttccagcaattg
gccgaagtgtaccacgtctatcactatattcaaagatatactgaggagcctttcagtttc
cacttgcctgaaacactcttcaatatttccaggtttctgcttcacagcttaacaaaggag
actcccttggggatctcaaaaattaatacattatttaccctggcaaaacaaagtaaagct
ctgggtgcgtataaactggcgcgtcatgcctacgacaagttacaggggctgcagatccca
gctaggttccagaaatctgtggagctgggcagcctgacgatccgatccaagccattccat
gacagcgaagagcttgtgcccttgtgctataggtgctctaccaacaaccctttgctaaat
aacttagggaatgtctgcattaactgcagacagcctttcgtcttctccgcctcttcctat
gaagtgctgcatctggttgagttctatttggaagatggtatcacagatgaagaagctgta
tctctcattgatcttgaagctccaagattgaataaaagcgggaataaatggcaagagatg
atgagtgatgatgcacagagcctgaggcttcatgacagcgcagttattgaagacgatgat
ccctttactgcaaaactgagctttgagcagggcggctcagagtttgttcctgtggttgtg
aaccgtgccgttctgcggtcgatgagtcggagggacgtgctgattaaacgctggccccgg
ccgctgcgatggcagtactaccggtccctgctgcccgatgcctccattaccatgtgcccg
tcgtgctttcagatgtttcacacagaagactatgagcttcttgtactccagcataactgt
tgtccattctgtcgaaggagaatagatgagtcaaaccagtga
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