Lagopus muta (rock ptarmigan): 125698590
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Entry
125698590 CDS
T09141
Symbol
NUP210
Name
(RefSeq) nuclear pore membrane glycoprotein 210
KO
K14314
nuclear pore complex protein Nup210
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125698590 (NUP210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125698590 (NUP210)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125698590 (NUP210)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_2
AlphaC_N
PQQ
Motif
Other DBs
NCBI-GeneID:
125698590
NCBI-ProteinID:
XP_048813049
LinkDB
All DBs
Position
11:complement(5556526..5617933)
Genome browser
AA seq
1883 aa
AA seq
DB search
MAPPAPRALLLLLLLHRLAASSKLNIPKVLLPFTRGTRVNFTLEASEGCYRWSSTRPEVA
SIEPADQGERQCSQKAVVQARSSQPTRLTSIIFAEDTMTGQVLRCDAIVDIIHGIQIVST
TRELYLEDSPLELKIQALDSEGNTFSTLAGLVFDWTIVKDTEADGFSDSHNALRILKFLE
STYIPPSYISEMEKVAKQGDTILVSGMKTGSSKLKARIQESVYKHVPPAEVRLLILENIL
LNPAYDVYLLVGTSIKYRVQKIRQGKITELMMPSDQYELQLQNNVLGPEGDPSWPVARLD
QETSIVTAMQQGQTNLILGHKSIRMQGVSRLPNSTIYVVNPGYLGFAVHPGDRWVLETGR
FYEITIEVYDKSSNKVYLSDNIRINTKLSEEYFEVLKSSLNGSYHYVKAIKKGQTIIDAA
LTSVVDEDGGVHTLPAPVRNQQDVEIYVPIVLSPSILTFPWQPKAGVYQYTIQAHGGSGN
FSWSCSNQAVATVTVKGVMTTGSDIGISIIQAIDVQNPLHYGEMKVYVTEPSGMEFVPCQ
VEARVGQMLELPLRINGLTNIETGEIVPLSDCSHFDLVVEVENRGVFRPLQGRLKPSADF
CSGVRVKAETEGYTTLAVSYTHAHVRLSASIIIAAYLPLKTVDPPSVALVTLGSSKDILF
EGGPRPWVQEPSKFFRNVTAEDTESIGLSLFAPPMSRNNIQHWVQVSCKSLGEQVIALTV
GNNPTMTNPFPAVEPAVVKFICAVPSRLTLTPIYGSPQLDLSCPLLQQNKQVVPVSNYRN
PVLDLAAYDQHGSKFDNFSSLSVIWESTKPSLANIEPDMPMELTLKDDGSGQRKMHGLQT
VLVHHKSGTTAISATATGYQRSHLKAAKVKTPYESLLPVSATIELILVEDVKVSPTDVSI
YNHPDVQAELFIKEGSGYFFINTSVASVVSVALEETQGIALVHPLLPGSVTVMVHDLCLA
FPAPAKAEVYVSDIQELYVRVVDKVEIGKTVKAFIRVLDDSKKPFLAKYFAVMDLKLRAA
SQIVSLVPLAEALDDHTAAFLVHGIAIGQTSLTASVADKRGQRINSAPQQIEVFPPFRLL
PRKVTLIIGAMIQITSEGGPQPQSNIIFSITNEKIASVNSTGLIRGVAAGNGTVTGVVQA
VDAETGKLVVVSQDKVEVEVVQLTAVRIRAPITRMKTGTQMPVYVMGITSSQTPFSFGNA
VPGLTFHWSVTKRDTLDIKTRHSEASFQLPAKYNFAMDVYGRVKGRTGLKVVVKALDPAA
NQFYNMARELSDEIQIQVFEKLHLVTPGVETEQILMSPNSFIKLQTNRDRVASLSYRVLD
GPDKVPVVKIDDRGFLNSGSLIGSSTIEVISQESFGINQTIVAAVKVYPISYLRISMSPI
LRTQTKEALLALPLGVTLTFTVHFHDNSGDTFHSHNSVLNFATNRDDFVQIGKGATNNTF
VIRTVNVGLTLLKVWDAEHSGIADYIPLPVQHAIFPELTDVVVGDVLCFSTSFTNQEGLP
GIWSSSSNSVLHIDSKTGVAVARDSGVATVYYEIPGLLKTYREVLINIPQRTTAMHVSGV
KTSLQGVAASKVIVLIGERNKNLQGECLPAQIEAIAELQPQTIISCHVKFDSDASDFPAH
DVFIAEPGFDAVSGHYTCSITMHRLTDKQLKHLSMSKTALRVTASIRGSRFSGEQIGTEV
PFNPGFYADQTEMLLSNHYTSADVKIFGATEILDTLEVKCGSPVVKAFEKEKSYGLPSYI
VYTVSLSDPRVSSQGSLSTALTVSSPVTDQTITIPVTVIYLTDRTSAPVRHGASLFQHFL
DSYQVMFFTLFALLAGTAVMIIVYHAVFSQKEQRTHPAFTPRTPPQHSHNSFSVSPVLSF
SPQTSSRRTSPSATLWSTDYGSR
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atggctccccccgcgcctcgggcgctgctcctcctgctccttctccaccgcctcgccgcc
tcctccaagctcaacatccccaaagtgctgctgcccttcacccgcggtacccgcgtcaac
ttcacgctagaggccagcgaaggctgctaccgatggtcctccaccaggccagaggttgcg
agcatagagcctgcagatcagggtgagcgccagtgttcgcagaaggcagttgtgcaggca
cggtcctcacagcccacacgtctgacaagtatcatctttgctgaagatacaatgactgga
caggttcttcgttgtgatgctatagttgatataattcatggcatacaaatcgtatccaca
acaagagagctctatcttgaagattcacctctagagctaaaaattcaagctttagattca
gaaggaaacactttcagcacgttggcagggttagtgttcgactggacgatagtaaaggac
acagaggctgatggcttctcagattcccacaatgcattgcgtatactcaagtttttagaa
tccacttatattccaccctcttacatatcagagatggaaaaagttgccaagcaaggagat
acaattttggtgtctggaatgaaaacagggagttctaaattaaaagcaagaatacaggag
agcgtctataagcatgtacctccagcagaagtcagattgcttattctggaaaacatcctt
ttgaatccagcatacgatgtttatcttctagtaggaacatcaataaagtacagagttcag
aaaataagacaagggaagattacagaattaatgatgccgtctgatcagtatgagctgcag
ctccagaacaacgtgcttggccctgagggagacccatcctggccagtcgccaggttggac
caggaaacatccattgtaactgcaatgcagcagggacaaactaatctcatacttggacac
aagagtattcgcatgcaaggtgtttccaggctaccaaacagcactatctatgttgtaaat
cctggttatttaggatttgcagttcatccaggtgacagatgggtcctagaaacaggcaga
ttttatgaaattacaattgaagtgtatgataaatcaagcaataaggtgtatttatctgat
aatatccgaattaatacaaagctgtctgaggagtattttgaggtcctgaagtcatctctg
aatggatcatatcattatgtgaaagcaataaagaagggtcagaccattattgatgctgca
ttgacatcagtagtggatgaggatggaggtgttcatacattaccagctccagtgcgaaac
cagcaagatgttgaaatttatgttccaatagttctttcacccagcattttgacatttcct
tggcagccaaaagcaggagtctaccagtatacgatacaggctcatggtggaagtggaaat
ttcagctggtcttgttctaaccaggcagttgctacagtgacagtcaaaggagtaatgaca
actggaagtgatattggcatcagtattattcaggcaattgatgttcagaatccactgcat
tatggtgaaatgaaggtctatgtaactgaacctagtgggatggagttcgtaccgtgtcaa
gttgaggcacgggttggccaaatgttggagctgcctctgaggattaatggtctaaccaac
attgaaacaggcgagatagtcccactaagtgactgttcacactttgatctggttgtggaa
gtagaaaatcgtggagtgttccgaccgcttcaaggaagacttaagccaagtgctgatttt
tgtagtggagtcagagtgaaagctgaaactgaaggatacacaacacttgctgttagttac
acccacgctcacgtccgcctcagtgctagcatcatcattgctgcttatctaccattaaaa
actgttgatcctccatcagttgctttagtgacgctgggttcctctaaagatattttattt
gagggaggacctagaccatgggtccaagagccttcaaagttcttcaggaacgtcacggcc
gaagatacagaaagtattggtctgtctttatttgcacctcctatgtctcgaaataacatc
cagcattgggttcaagtatcctgcaaaagcctgggagagcaagttattgctttaacagtt
ggaaacaaccccactatgaccaacccttttccagcagttgagcctgctgttgtgaaattt
atctgtgctgtcccttcacgactcactttgactcctatttatggaagccctcagcttgat
ctctcctgtcctttgctgcaacaaaacaagcaagtggttcctgtttcaaattaccgcaat
ccagtattggatttggctgcttatgaccagcatggcagtaaatttgataacttcagttct
cttagtgttatctgggaatcaacaaaaccatctttagctaatattgagcctgatatgccg
atggagctaaccctgaaggatgatggaagtggtcaaaggaaaatgcatggcttacaaact
gttctagttcatcacaagtctggaactactgctatctctgcaactgcaacaggataccaa
cggtctcatctcaaggcagctaaagtaaaaacaccgtatgaatctcttctaccagtgtct
gccactattgaactgatattagtggaagatgtaaaagtcagccctactgatgtctccatt
tacaatcatcctgacgttcaagcagaactgttcatcaaagaaggttctggatattttttc
atcaatacaagtgttgcaagtgttgtcagtgtggctcttgaggaaactcaaggtattgct
ttggtgcatcctctgcttccagggtcagtgactgtaatggttcatgatttgtgtttggcc
ttccctgcaccagccaaagccgaagtttatgtctctgatatacaggaactgtatgtccga
gtggttgacaaggtggagattggaaaaacagttaaggctttcatcagagttctggatgac
tctaagaaaccttttctggctaaatactttgctgtcatggatctaaaattaagagcggct
tcccagattgtttcactggtcccacttgctgaagcccttgatgaccatactgcagctttc
ctagtgcacgggatagccataggtcagactagtcttactgcatctgttgctgacaaaaga
ggacaaagaatcaattctgctccacaacagattgaggtctttccaccatttagactactg
ccaaggaaagtgaccctaataataggagccatgattcagatcacttcagaaggaggccct
cagcctcaatccaacatcattttctccatcaccaatgagaagattgcatcagtgaacagc
actggactcatcagaggagtggcagcagggaatgggacagtaacgggagtggtgcaagca
gttgatgcagagacagggaagctggttgtggtgtcgcaggacaaagtggaagttgaagta
gtgcagttgacagctgttagaattcgagcaccaattacacgtatgaaaactggaacacag
atgccagtttacgtgatgggcatcaccagtagccagacacctttttcatttggcaatgca
gtaccaggattaacattccactggtctgtcacaaagagggatactctggacataaagaca
aggcacagtgaggcttcttttcagcttcctgcaaaatataactttgcaatggatgtttat
ggcagagtaaagggaagaacaggcctgaaagttgttgtgaaagccctcgaccctgcagcc
aaccagttttacaacatggcaagagaactatctgatgaaatccaaattcaggtatttgaa
aaacttcatttagtcactcctggtgtagaaacggaacagatcttaatgtcaccaaattcc
tttattaaacttcaaacaaacagggatcgagtggcttcactgagttaccgtgtcctggat
ggtccagataaagtgcctgttgtaaaaattgatgacagaggttttcttaactctgggtct
ttaataggttcatcaacaattgaagtaatttcacaagaatcatttggaattaatcagacc
attgtagctgctgttaaggtctaccccatctcatacctaagaatctccatgagtcctatt
ctgcgtacacaaaccaaagaggcattactggctctacccctgggtgtgacactgacgttt
acagtccattttcatgacaattctggagatacttttcattcacataactctgtgctcaac
tttgcaacaaacagagatgactttgtacagattgggaaaggagccacaaacaacacattt
gtgatccggactgtaaacgtaggcttgaccttgcttaaagtctgggatgcagaacacagt
ggaattgcagactacatcccccttcctgtgcagcacgccatttttcctgaactcactgat
gtggttgtaggtgatgtcctctgcttcagtacttcattcacaaaccaagaaggcctgcca
gggatatggagctcttcatcaaacagtgtgcttcacatcgactccaagactggtgtagct
gtcgcaagggattctggtgttgccacggtctattatgagattcctggattacttaaaaca
tacagagaggtattgattaacatacctcagaggactacagcaatgcatgtaagtggagtg
aaaaccagcttacaaggagttgcagcctcaaaagtaatagttttgattggagaaagaaat
aaaaatttgcaaggggagtgcttgcctgctcagattgaagccattgctgaattgcaacca
cagaccattatcagttgtcatgtaaaatttgacagcgatgcatctgactttccagcacat
gatgtatttatagcagaacctggatttgatgcagtttcaggacattacacgtgttccatc
acaatgcacaggcttactgacaagcaactgaagcatctcagtatgagtaaaacagcgctc
agagttacggcttcaatccgaggcagtcgcttctctggagaacagattggcactgaggtg
ccattcaatcctgggttttatgctgaccaaacagaaatgcttttaagtaatcattacaca
agcgctgatgtgaaaatatttggtgctactgaaattcttgataccctggaggtgaaatgc
gggtcaccagtggtgaaggcattcgagaaggagaaatcctatgggctgcctagttacata
gtctacaccgttagtctgtctgacccaagagtttcaagccagggatccttatcaactgct
ctgactgtctctagtcctgtgactgaccagactatcactattccagtgacagtgatttat
ttgactgacagaaccagcgcaccagtgagacatggagcaagtctattccagcactttctt
gattcctatcaagtaatgttcttcacactttttgcactattagcagggacagctgttatg
atcatagtctatcatgcagttttctcacaaaaagaacagcgcactcatccagcgtttacc
ccaaggacacctcctcaacacagccataacagtttctctgtatcacctgtgctttccttc
agccctcagacctcaagcaggagaacaagcccatcagccacgctctggagcactgattat
ggctcacgttag
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integrated database retrieval system
