Lagopus muta (rock ptarmigan): 125698667
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Entry
125698667 CDS
T09141
Symbol
RB1
Name
(RefSeq) retinoblastoma-associated protein isoform X1
KO
K06618
retinoblastoma-associated protein
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04110
Cell cycle
lmut04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125698667 (RB1)
04218 Cellular senescence
125698667 (RB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lmut01009
]
125698667 (RB1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125698667 (RB1)
Protein phosphatases and associated proteins [BR:
lmut01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125698667 (RB1)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
125698667 (RB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
Motif
Other DBs
NCBI-GeneID:
125698667
NCBI-ProteinID:
XP_048813284
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All DBs
Position
1:166858929..166939018
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AA seq
921 aa
AA seq
DB search
MPPKPLRRAGAARSQRTSPEGGAGTASPPGGTRLEVGEAEFVALCDALKASDSVREKAWR
TYESLAAADGAPAYNKKKKETWGVCIFIVAIDLDEMTFTFTELLKSLSTSVCTFFQFLKE
VDVNMDTVSTKVDSTVSRLKKKYDVLLALYHKFERTCGLIYLEQPSSEISAELSSVLVLK
NYWITFLLAKGKVLQMEDDLVISFQLLLCVLDYFIKLSPPAMLKEPYKSAVTARTVNGST
RTPRRGQNRNARASKQTDTDTKVIEILCKEHDCNLDEVKNVYFTSFIPFLNSLGVVASNG
LPEVDVLSKQYDELYLKNKDIDARLFLDRDETLQPDVITCSQLERTPGKNNPDEEVNHVL
PQTPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVESLGHIFKKKF
AEAVGQGCAEIGSQRYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIFHTSLLACA
LEIVMATYGRTASQNDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVEPSLTRDMIK
HLERCEHRIMESLAWQSDSPLFDLIKQSKEREGQTDQPEPTSTLNLPLQHNHTAADLYLS
PVRSPKKKASGHPQSGTSNPDAQPSATSQTQKPQKSTSLSLFYKKVFRLAYLRLHTLFFR
LLSEHPDLEPLIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNVDLRFKTIVSAY
KELPNTNQETFKRVLIREEQYDSIIVFYNLVFMQKLKTNILQYASNRPPTLSPIPHIPRS
PYQFSNSPRRVPAGNNIYISPLKSPYKFSDGFQSPTKMTPRSRILVSIGETFGTSEKFQK
INQMVCNSESHVKRSAEPSDAPKPLKRLRFDIEGQDEADGGKHLPQESKFQQKLAEMTST
RTRMQKQKLNDGNDTSANEEK
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccaagccccttcgcagggcgggcgccgcccggagccagcgcaccagccccgag
ggcggcgccggcaccgcctcaccgcccggcggcacccggctggaagtgggagaagcggag
ttcgtggctctctgtgatgcgctgaaggcgtcggacagcgtgagagagaaggcctggagg
acgtacgagagcttggcggccgccgacggggctccggcttataacaaaaagaagaaggag
acatggggagtctgtatctttattgtagcaattgatctggatgaaatgacattcactttt
acagagctgctgaaaagtttaagcacaagtgtgtgcacattttttcagtttctcaaagag
gtggatgttaacatggatactgtaagcactaaagttgatagcactgtatcaaggctgaaa
aagaaatatgatgtcttacttgcactgtatcacaagtttgaaaggacttgtggccttatt
tatctggaacaacccagtagtgagatttctgctgaactcagttctgtattagtcctaaaa
aattactggattacttttttgctggcaaaaggtaaagtgttgcaaatggaagatgaccta
gtgatttctttccagttgttgctgtgcgtcttagattattttatcaaactgtcacctcct
gctatgctcaaggaaccatacaagtctgctgtgactgcacggactgttaatggttcaact
cgaaccccacgaagaggtcagaacaggaatgcacgtgcttcaaagcaaactgatacagat
acaaaagttattgaaatcctttgtaaagagcatgattgtaatttagatgaggtaaaaaat
gtgtatttcacaagctttattcctttcttgaattctcttggtgttgtagcctcaaatgga
ttaccagaggttgacgttctctcaaaacaatatgatgagctttatctcaaaaacaaagat
attgatgcaagattatttctggatcgtgatgaaactctacagcctgatgttataacatgc
tcacagttggaaagaacaccaggaaaaaataatccagatgaggaggttaatcatgtactt
ccacagactcctgttcgggctgcaatgaatactattcagcaattgatgatgattttgaac
tcggcaactgataaaccatcagatactctcattgcatatttcaataattgcacagtgaac
cctgaagacagtatcctgaaaagagtggaaagtcttggccacatcttcaaaaagaaattt
gctgaagcagttggacagggatgtgctgagattggttcacagagataccagcttggagta
cggctgtattacagagtaatggagtctatgctgaagtcggaagaagagcgcctctcagtg
cacaattttagcaaacttctgaatgataacatcttccacacatctcttctggcgtgtgct
ctcgaaattgtcatggctacatatggcagaactgcttcacagaatgatggtaccagtgct
gaaacagatttgtctttcccgtggattctcaatgtatttgatttaaaagcttttgacttc
tacaaggtgattgaaagtttcattaaagtggagccaagcctaacaagggacatgataaag
catctggaacgctgcgaacatcgcattatggaatctcttgcttggcaatctgattcacct
ctgtttgatcttatcaagcagtcaaaagaacgagaaggtcagaccgatcagcctgagccc
acttccaccctaaatctgcctctccaacataaccacactgcagcagatctgtatctttct
cctgtgagatctcctaagaagaaagcatctggacaccctcaaagcggtacttctaatcca
gatgctcagccatctgcgacctcacaaacacagaagccacagaaatctacctccctctct
ctgttctacaaaaaagtgtttcgcctggcctatcttcgattgcacaccctgttctttcgg
cttctctctgaacatcctgacctggagccgttgatctggaccctcttccagcacacactg
caaaatgagtatgagctgatgagagacaggcacttggaccagatcatgatgtgttccatg
tatggcatatgcaaagtgaagaatgtggatcttagatttaaaacaatagtttctgcatac
aaagagctgcccaatacaaaccaagagactttcaaacgtgttcttatcagggaagagcag
tacgactccattatagtcttctacaacttagtgttcatgcagaaactgaagacaaacatc
ctacagtatgcctccaacaggcctcctacgctgtcacctatcccacacattcctcgcagc
ccctaccagttttccaattctcctcggcgtgtccctgcaggcaataacatctacatctca
cccttgaagagcccctacaaattctctgatgggtttcagtctcccacaaagatgactccg
aggtccagaatcctggtgtcgattggtgaaacgtttgggacttctgaaaagtttcaaaaa
ataaaccagatggtgtgcaacagcgagagccacgtaaagcgcagcgcagagcccagcgat
gcccctaagccactcaagaggctgcgcttcgatatagaagggcaagatgaggcagatgga
ggcaaacacctgccccaggagtccaagttccaacaaaagcttgcagaaatgacatccact
cgaacaagaatgcagaagcagaaactgaacgatggaaacgatacctcagccaatgaagaa
aagtga
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