Lagopus muta (rock ptarmigan): 125698903
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Entry
125698903 CDS
T09141
Symbol
IARS1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125698903 (IARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lmut01007
]
125698903 (IARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lmut03016
]
125698903 (IARS1)
Enzymes [BR:
lmut01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
125698903 (IARS1)
Amino acid related enzymes [BR:
lmut01007
]
Aminoacyl-tRNA synthetase
Class I (U)
125698903 (IARS1)
Transfer RNA biogenesis [BR:
lmut03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
125698903 (IARS1)
Prokaryotic type
Other AARSs
125698903 (IARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
Plectin_PPL
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
125698903
NCBI-ProteinID:
XP_048813779
LinkDB
All DBs
Position
11:3454235..3546729
Genome browser
AA seq
1265 aa
AA seq
DB search
MVQQVPENISFPNEEEKILELWKKLNCFQECLKQSKNRPRFNFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNNQC
RGIVMRYSKEWEFNVTRLGRWIDFENDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVIVSFPLVEDASVSLVAWTTTPWTLPSNLALCVNP
ELQYVKLRDKATGKIYILMESRLIALYKSDSEYEILDRFPGIVLKGKKYKPLFEYFIQCR
DKGAFTVLVDNYVKEEEGTGVVHQAPYFGADDYRVCMDFNVIQKDSVPVCPVDVSGCFTA
EVTDFAGQYVKDADKNIIKLLKEKGRLVHSSSYKHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVEKLLENNAQCYWVPDFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSDDFEEVVC
IGSMAELEELSGVKVTDLHRESIDHLTIPSRCGKGVLRRVPEVFDCWFESGSMPYAQVHY
PFENKKELEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGRPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPMAIVNSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPWYNAY
RFLVQNVHILQHKDEGREFLYNENTVKESNNIMDKWILSFTQSLVQFFKAEMAAYRLYTV
VPRLVKFVDILTNWYVRMNRRRLKGENGTEDCIMALETLFSVLFSMCRLMAPYTPFITEL
MYQNLKTLIDPASVQEKNTESIHYLMLPPVREDLIDRKIENAVSCLQSVIELGRVIRDRK
TIPVKYPLKEVVVIHQDPEALENIRSLEKYILEELNVRQVTLSTNKDKYGVRLRAEPDHM
VLGKRLKGAFKPVMAAIKELKSEQLEEFQETGTIVVEGHELHGEDLRLMYTFDQVAGGSA
QFEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYRSDPEG
DYLDTVIKEHTDFIFATIKAALKPYPVPTSKEVLIQETTQLKGSELEITLVRGGLCERVG
PACSYVNLKVCVNGTEQDGVLLLENPKGDNTLNLTGLVDAVSCIFGLKNSKLTVFNGKTE
LINKTDLLSLSGKTLHVTTGSAPALISSPDALLCQYINLQLINAKPQECQKGTVGTLLME
NPVGQNGLTYHGLLHETAKVFGLRSRRLKLFLDEAETQEITKDISMKNLNMKTVYVSVIP
TTAEC
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaacaagttccagaaaacataagttttccaaatgaggaagagaagatactggag
ctctggaagaagcttaattgtttccaggaatgcctgaagcagtcaaagaatagacctagg
tttaacttctatgatggccctccatttgctactgggcttccacactatggccatattctt
gcaggaaccattaaggacatagttaccagatttgctcatcagagtggctttcatgttgac
aggagatttggatgggattgccatggcttacctgtggaatatgagattgacaaaacctta
ggcatcaaagggccagaggatgtggcaaagatggggattgcagaatacaacaaccagtgc
agaggaattgtgatgagatactcaaaggaatgggagttcaacgttaccagattaggacgc
tggattgattttgaaaacgactataaaacactttatcctgaattcatggagtctgtgtgg
tgggttttcaagcagctatatgacaagggactggtatatagaggtgttaaagtcatgcct
ttctctactgcttgcaataccccattgtcaaattttgagtcccatcagaattacaaggat
gttcaagacccttcagtgattgtgagtttccccctggttgaagatgcaagtgtctctctt
gttgcttggaccactacaccttggactttacctagcaatctggccctttgtgtgaaccca
gaactacagtatgtgaaattgagagataaggctacaggaaagatttacatcttgatggaa
tccaggctgatagcactatacaaatctgacagtgaatacgagatactggacaggtttcct
ggcattgttctaaaaggcaagaagtataaaccactctttgaatattttattcagtgcaga
gataaaggtgcctttactgtgttggtagacaattatgtgaaggaggaagaaggcacaggt
gtcgttcatcaagccccctattttggtgctgatgattacagagtctgtatggattttaat
gttattcagaaagattctgtcccagtttgtcctgttgatgtgtcaggctgcttcacagct
gaagtgaccgattttgccggacagtacgtgaaggatgcagataagaacatcattaaatta
ctgaaggagaaaggcaggctggttcacagcagtagttacaaacacagctatccgttctgc
tggaggtcagatactccgttgatatacaaagctgtgccaagctggtttgtaagagtagag
cacatggtggagaagttgctggagaataatgcccagtgctactgggttccagatttcgtg
agggagaagcgttttgggaactggctaaaagatgcacgagattgggctatatctagaaac
cggtactggggaacacccatcccactgtgggtcagtgatgattttgaagaggtagtttgt
attggttcaatggcagaactggaagagctgtcaggagtgaaagtcaccgatctgcatcgg
gaaagcattgatcacctaaccatcccttcacgctgcggcaaaggcgttttgcgccgggtc
cctgaagtttttgattgctggtttgagagtggaagcatgccttatgcacaagtgcattat
ccatttgaaaacaaaaaagaacttgaagatgcttttcctgctgacttcattgctgaaggc
attgaccaaacccgaggatggttctacactttgctggtgctgtccactgctctttttgga
agacctcctttcaagaatgtaattgtaaatggcctggttcttgccagtgatggccaaaaa
atgagcaaaaggaagaagaattatcctgatccaatggctattgtaaatagttatggagct
gatgcactaaggttatatcttatcaattctccagtggtaagagcagaaaacttgagattt
aaagaggaaggagtaagggacatactgaaggatgtcttcctgccctggtacaatgcatat
cgcttcctagttcagaacgttcacatcctgcagcataaggatgagggaagagaattcctt
tacaatgagaacacagttaaggagagcaataacatcatggataaatggattctttctttc
acccagtcgctcgttcagttcttcaaagctgaaatggcagcttacaggctgtacacagta
gtgcctcggttagtgaagtttgtagacattctgaccaactggtatgtgagaatgaatcgc
agaagactgaagggtgagaacgggactgaggactgcattatggccctggaaaccttgttc
agcgttttgttttccatgtgcagacttatggctccatatactccatttatcactgaactg
atgtaccagaatctgaagacacttattgatccagcttcggttcaggagaagaatactgaa
agcatccactacctcatgcttcccccagtgagggaggatctgatcgacagaaaaattgaa
aatgctgtttcttgtttgcagtctgttattgagcttggacgagtaatcagagacagaaaa
accattccagtaaagtatcctttgaaagaagtagttgttatccatcaagacccagaggct
ctggaaaacatcaggtctctagagaagtacatacttgaggagcttaacgtacgccaggtg
acgttatccacaaataaagataaatatggagtgcggctgagagcagaacctgatcacatg
gtgcttgggaagcgcttgaaaggtgcatttaagcctgtcatggctgcaatcaaagagctg
aagagtgagcagctggaggaattccaagagacaggcaccattgttgtagaaggacatgag
cttcatggggaggatctacgtctcatgtatacttttgatcaggttgcaggaggatctgcc
cagtttgaggcgcactctgatgctcaggttttagttctgctggatgttaccccagaccag
tctatggtggatgaaggagtggcccgggaagtgatcaaccgcattcagaagcttcgcaag
aagcgaaacctggttcccacagatgagattacagtgtactacagatcagatccagaaggt
gattacttggatactgtcattaaggaacatacagatttcatttttgcaactataaaggct
gccctgaagccttacccggttcctacctcaaaagaagttctcatccaggagaccacccag
ctgaagggatcggagctagaaattacacttgtcagaggtggtttgtgtgagcgtgttggt
ccagcctgttcctacgtcaacctcaaagtctgtgttaatgggacagagcaagatggtgtg
ttgctgctggaaaatccaaaaggagataataccttgaatctcactggacttgtcgatgcg
gtctcctgcatttttggacttaaaaattcaaaactcacagtttttaatggaaaaacagaa
ctgataaacaaaactgacttgcttagtctcagtggaaagactctgcatgtgacaacgggg
tcggcacctgctctcatcagctctcctgatgctcttctctgccagtatatcaacttgcag
ttaataaatgcaaagccacaagagtgtcagaaaggaacagtgggaactcttctaatggaa
aacccagttggtcagaatggattaacgtaccacggtcttctacatgaaacagcaaaagtt
tttgggctcagaagcaggaggctaaaattgttcctggatgaagcagagactcaggagatc
acaaaggacatctccatgaagaacctgaacatgaagactgtatatgtcagtgttataccc
accacagctgaatgttga
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