Lagopus muta (rock ptarmigan): 125699278
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Entry
125699278 CDS
T09141
Name
(RefSeq) cystathionine beta-synthase-like protein isoform X1
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut00260
Glycine, serine and threonine metabolism
lmut00270
Cysteine and methionine metabolism
lmut00670
One carbon pool by folate
lmut01100
Metabolic pathways
lmut01230
Biosynthesis of amino acids
Module
lmut_M00035
Methionine degradation
lmut_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
125699278
00270 Cysteine and methionine metabolism
125699278
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
125699278
Enzymes [BR:
lmut01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
125699278
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Gene cluster
GFIT
Motif
Pfam:
PALP
CBS
DUF1414
Motif
Other DBs
NCBI-GeneID:
125699278
NCBI-ProteinID:
XP_048814633
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Position
1:complement(108858657..108885826)
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AA seq
568 aa
AA seq
DB search
MEKLISEKPFPVSKAKPDTNSCPYASGKYFLPVGTDNEDCKTNDKERKWIRPDTPSKCTW
KLGKPISASPHHHMSLPDPPNILPNILNKVGNTPLVRINKIGKHFGLKCELLAKCEYFNA
GGSVKDRISLRMVEDAERAGILKPGDTIIEPTSGNTGIGLALAAAVKGYRCIIVMPEKMS
MEKVDVLRALGAEIVRTPTTARFDSPESHVGVAWRLKNEIPNAHILDQYRNASNPLTHYD
TTAEEILQQCEGKIDMFVATAGTGGTITGVSRKLKEKCPGCKIIGVDPEGSILAQPDELN
KTDKTMYEVEGIGYDFVPTVLDRSLVDQWYKSNDEESFALARMLIREEGILCGGSSGSAM
SVAVKAAKELKEGQRCVVIFPDSIRNYMSKFLSDKWMIQKGFMTEEDLVKKPWWWNVSVQ
ELSLSAPLTVLPTVTCAKTVEILREKGFDQVPVVDESGVILGMVTLGNMLSSLLAGKVQP
SDEVSKVIYKQFKQADNQESGGSVINLKDNLGKLSHILETDHFALVVHEQIQYHTDGSSS
KRQMVFGIVTAIDLLNFVTARERERKIN
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggagaagctgatatcagagaagccttttccagtatctaaggccaagccagatacaaac
tcgtgcccttatgcttctggcaaatacttccttcctgttgggacagacaatgaagactgc
aagactaacgataaggaaaggaagtggatccgtcctgatacacccagcaaatgcacgtgg
aagcttgggaaacccatctctgcctccccccatcatcatatgtctctgccagaccctcca
aacattctgcccaacatcttgaataaagttggcaacacaccgttggtgcggatcaacaag
attgggaagcactttgggctgaagtgtgaactcttggcaaaatgcgagtacttcaatgct
gggggcagtgtgaaagaccgcatcagcctgaggatggtagaggatgctgagagagctggg
attttgaagcctggggacacgatcatagagccaacctctggaaacacaggaattgggctg
gccttggctgcagcagtgaagggttaccgctgtatcattgtgatgccagagaaaatgagt
atggagaaggtggatgttctgagagctctgggtgctgagattgtgaggaccccaactact
gccagatttgattctcctgaatctcatgtgggtgtagcatggagactgaagaatgaaatc
cccaatgcacatatcttagaccagtaccgtaatgccagcaatcccctgacacactatgat
actacagctgaagagatcctgcaacagtgtgaaggaaaaatagacatgttcgtggctaca
gctggtacaggaggtaccatcactggtgtctccagaaagctgaaggagaagtgtccaggt
tgcaaaatcataggtgttgatcctgaaggctccatccttgctcaacccgatgaactgaac
aagactgacaagacaatgtatgaagtggaaggaattggatacgattttgttcccacagtg
ttggatagatctctggtggaccagtggtacaagagcaatgatgaggagtcatttgcttta
gcacgcatgctgatccgagaggaaggaatcctgtgtggtggcagctcaggcagtgcaatg
tctgtagctgtgaaggcagccaaagagctgaaggagggtcagcgctgtgttgttatcttc
cctgactctatcaggaactacatgtccaagttcttgagtgacaaatggatgattcagaaa
gggttcatgacagaagaagaccttgtcaaaaaaccttggtggtggaatgtcagtgttcag
gagttaagcctctcagctcccctgactgtgcttccaactgttacctgtgcaaagactgtt
gaaattcttcgggagaaggggttcgaccaggtaccagttgttgatgaatctggggtgatt
ttgggcatggttactctaggtaacatgctttcttcactgcttgctggaaaagttcagcct
tcagatgaagtcagcaaagttatctacaagcagttcaagcaggcagataatcaagaatca
ggtggaagtgtgattaacctgaaagacaacttggggaagctctctcatatcctggaaaca
gaccactttgctctagtggttcacgaacagattcagtatcacactgatggttcctccagt
aagcgacaaatggtgtttggcattgttacggccattgacctgctcaactttgtgactgcg
cgagaacgggaaagaaagatcaactaa
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