Lagopus muta (rock ptarmigan): 125699697
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Entry
125699697 CDS
T09141
Symbol
CD40LG
Name
(RefSeq) CD40 ligand
KO
K03161
tumor necrosis factor ligand superfamily member 5
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04060
Cytokine-cytokine receptor interaction
lmut04514
Cell adhesion molecules
lmut04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
125699697 (CD40LG)
04514 Cell adhesion molecules
125699697 (CD40LG)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
125699697 (CD40LG)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lmut04052
]
125699697 (CD40LG)
04090 CD molecules [BR:
lmut04090
]
125699697 (CD40LG)
Cytokines and neuropeptides [BR:
lmut04052
]
Cytokines
Tumor necrosis fators
125699697 (CD40LG)
CD molecules [BR:
lmut04090
]
Proteins
125699697 (CD40LG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
C1q
DUF2244
Motif
Other DBs
NCBI-GeneID:
125699697
NCBI-ProteinID:
XP_048815476
LinkDB
All DBs
Position
13:4333826..4338045
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AA seq
272 aa
AA seq
DB search
MNEAYSSAAPRPISSTSPSTMKMFMCFLAVFMVVQTIGTVLFCLYLHMKMDKMEEVLSLN
EDYIFLRKVQKCQTEEGQKSTLLDCGKVLKGFQDLQCKDRTASEELPKFEMHRGHEHPHL
KSRNETSMAEEKRQPIATHLAGVKSNRAVRVLEWKTTSYAPTSSLISYHEGKLKVEKAGL
YYIYAQVSFCTKAAASAPFTLYIYLYLPMEQDRLLMKGLDTHSTSTALCELQSIREGGVF
ELRQGDMVFVNVTDSTLVNTNPGNTYFGMFKL
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagcctacagctctgcagcaccccgacccataagcagcacctctcccagcacc
atgaaaatgtttatgtgcttccttgctgtattcatggtggtacagaccattgggaccgta
cttttctgcttatatcttcacatgaagatggataagatggaagaagtgttgagtttaaat
gaagattacatcttcctgaggaaagtgcagaaatgtcagacggaagaaggtcagaaatcg
acattattggactgtggaaaagttctgaaaggcttccaggaccttcagtgcaaggatagg
acagccagcgaggagttgccaaaatttgaaatgcacagaggtcatgagcacccccacttg
aagagtaggaatgagacatctatggcagaggagaagaggcagccgattgcaacgcacctg
gcaggggtgaagagcaacagagcagtgcgagtgctggagtggaagacgacgagctatgcc
ccaacaagcagcttgatatcctaccacgaggggaagctgaaagtggaaaaagcagggctc
tactacatctacgcacaagtcagcttctgcaccaaggcggcggcttcggcgccgttcacc
ctctatatttatttgtacctccccatggaacaggaccgtctcctgatgaagggactcgac
acacacagcacctccacggctctctgtgagctgcagtccatccgggagggcggtgtcttt
gagctgcggcagggcgacatggtcttcgtcaacgtgacggactcaacgctagtgaacacc
aaccccggcaacacctactttggcatgttcaagctgtag
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