Lagopus muta (rock ptarmigan): 125700002
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Entry
125700002 CDS
T09141
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04010
MAPK signaling pathway
lmut04020
Calcium signaling pathway
lmut04510
Focal adhesion
lmut04540
Gap junction
lmut04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lmut01001
]
125700002 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lmut04090
]
125700002 (PDGFRB)
Enzymes [BR:
lmut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
125700002 (PDGFRB)
Protein kinases [BR:
lmut01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
125700002 (PDGFRB)
CD molecules [BR:
lmut04090
]
Proteins
125700002 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
C2-set_2
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
125700002
NCBI-ProteinID:
XP_048816071
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All DBs
Position
14:12929271..12955170
Genome browser
AA seq
1090 aa
AA seq
DB search
MLCPSLKASLQLLILTGLLEVTSGGSGLHIEPEDAELVLRLHSTFSLLCYGDSALVWERD
GQPLAASLEHRDGVFVSNLTLKNVTGRHTGEYACFYSPDQASERAERKALYIYVPDPSLV
FLPAITSEEFFIFITGYTEAIIPCRVTNPELQVTLYEKKVENPIPAAYDPQQGFKGFFED
KTYYCQAIVDDQEVDSDTFYVYRIQVSSVNVSISAVQTVVRQGENVTLMCTVSGNELVNF
NWDYPRKQAGKAVEPVTDFLPGSTHDIRSILIIQNAELEDSGTYVCNVSEGYHEKTDRKD
ITVQVIERGFVRFHTHLASTVYAEVHKSHIIQVDVEAYPQPNIVWLKNNKTLTMESSSEF
TITNRNLSETRYQTSLVLVRVKQEEGGYYTIRASNEDDAQELSFHLQINVPAKVVDLKEN
SSASSGEQTVTCSAEGMPQPEISWSTCSNIKRCGNQGQPTQLLGNNSAEIGLHTNATYHA
ELQVYRVNSTLQLHRVDEPLLLRCTVQNFLGSNSQDITLVPNALPFKVVIISVILALLVL
TVISLIILIVLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSSWEVPRDKLVLGR
TLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNI
VNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQSYGEKARREAELYGNTIKEDHV
QSHLSLSVESDGGYMDMSKDESLDYVPMSDMKGEIKYADIESSNYGTPYELDSYSPSAPE
RTDRVTLINESPLLSYMDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICD
FGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY
PELPMNEQFYNAIKRGYRMSKPTHASDEIYDIMQKCWEEKFEIRPSFSQLVVLMGNLLVD
CYRKRYQQVDEEFMKSDHPAVVRTRPTIPGLNNARLPPSSPTLYTAVHQNGGENDYIIPL
PDPKPEAICDLPQEASISRASSILNEANTSSTISCDSPLGPQQDEQPECDLQLGCQELAP
GHQEVEESFL
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgctctgtccctctctgaaggcatcactgcagctcctcatcctcactggtctgctggag
gtaacgtctgggggcagcgggctgcacatcgaacctgaagatgctgagctcgtccttagg
ctccacagcaccttctccctcctgtgctatggggacagcgcgctagtctgggagcgggat
ggtcagcctctcgctgcctcgctggagcacagggatggggtctttgtcagcaacctcacc
ctcaagaacgtgacaggccgtcacacaggggagtatgcatgcttctacagccccgaccag
gcttcagagcgagcagagaggaaagccctttatatctatgttccagatccctccttagtt
tttctccccgcaatcacttctgaagagttcttcatcttcatcacgggctacacagaggcc
atcatcccatgccgtgtgaccaacccagagctgcaggtgaccctttatgaaaagaaagtg
gagaatcccattccagctgcttatgacccacagcagggcttcaaaggtttctttgaggac
aagacctactactgccaggcaatcgtggatgaccaagaggtggattcagacaccttctat
gtctacaggatccaggtctcatctgtgaacgtctccatcagcgcggtgcagaccgtggtg
cgtcagggagaaaatgttaccctgatgtgcactgtcagcggcaatgagctggtcaacttc
aactgggattatccacgcaagcaggctgggaaagctgtggagccagtgaccgacttcctg
cctggatccacccatgacatccgttccatcctcatcatccagaatgcagagctagaggac
agtgggacctatgtctgcaatgtctctgagggctaccatgagaaaacagaccgcaaagac
atcacggtccaagtgattgagcgtggctttgtgcgcttccacacccacctggccagcaca
gtgtatgctgaggtccacaagagccacatcatccaggtggatgtggaagcctacccacag
ccaaacattgtgtggctgaagaacaacaagacgttgaccatggagagcagcagtgagttc
accatcaccaacaggaacctgtcagaaaccaggtaccagacgtctctggtcctggtgcgg
gtgaagcaggaggaaggaggatattacaccatccgagcttccaatgaggacgatgcacaa
gagctgtccttccatctgcaaataaatgtgccagccaaagtggtggatctcaaggaaaac
agcagtgccagcagcggggagcagactgtaacatgctctgctgaagggatgccccagcca
gagatcagttggtccacttgcagcaacatcaagcggtgtggcaaccaggggcagcccacc
cagctgctggggaacaactctgcagagattggcctgcacaccaacgccacgtaccatgca
gagctgcaggtgtaccgcgtgaacagcaccctgcagctgcacagggtggatgaacccctg
ctcctgagatgcactgtgcaaaacttcctgggctccaactcccaagacatcactctggtc
ccaaatgccttgccgttcaaagtggtcatcatctctgtcatcctggctctgctggtcctc
actgtcatctccctgatcatcctgatcgtcctgtggcagaagaaacctcgctatgaaatc
cgctggaaggtgatcgagtcagtgagctctgatgggcacgagtacatctatgtggatccc
atgcagctcccttatgactccagctgggaggtgcccagggacaagctggtgttaggacgc
actcttggctccggtgcctttggacgtgtggtggaggcgacggcgcatggcctgagccat
tcacagtccaccatgaaagttgcagtcaagatgctcaagtccactgcccggagcagtgag
aagcaagccctcatgtctgagctgaagatcatgagccacctgggacctcacctcaacatt
gtcaacttgctgggggcctgcaccaaaggagggcccatctatatcatcaccgagtactgc
cgttacggcgacctggtggactacctgcaccgcaacaagcacaccttcctgcagtcctat
ggcgagaaggcccgccgggaggcagagctgtatgggaacaccatcaaggaggaccatgtg
cagagtcacctttccttgtctgttgagagcgatgggggctacatggacatgagcaaggat
gagtctctggattatgtgcccatgtctgacatgaagggtgaaatcaagtacgctgacatc
gagtcctctaactacggcaccccatacgagctggacagctattccccatcagctcctgaa
agaacagaccgggtgacactgataaatgaatctccacttctcagctacatggacttggtg
ggcttcagcttccaagtggccaatgggatggagttcctggcttccaaaaattgtgtgcat
cgtgacctggctgccaggaatgtcctcatctgcgagggaaagctggtgaagatctgtgac
tttggtctggcaagagacatcatgagggattccaactacatctccaaaggaagtaccttc
ttgccccttaagtggatggctcctgagagcatcttcaacaacctctacaccaccctaagt
gatgtgtggtcctttgggattcttctctgggagatattcactctgggagggactccctac
cctgaactgcctatgaatgaacagttctacaatgccatcaaacgtggctatcggatgtcc
aagcccacccatgcttctgatgaaatctacgatattatgcagaagtgctgggaggagaag
tttgagatcagaccgtccttctcacagctggtggtgcttatgggaaacctcttggtggat
tgctacagaaagaggtaccagcaggtggatgaagagttcatgaagagcgaccaccccgct
gttgttcgcacaagacccaccatccctgggctgaacaacgccaggctccctcccagctcc
ccaactctctacacggctgtgcaccagaacgggggagagaacgactacatcatccctctt
cctgaccccaagcctgaggcaatctgtgacctccctcaggaggcctccatcagccgggcc
agctctattctgaatgaagccaacacatcatctacaatatcctgtgacagccccctgggc
ccccagcaggacgagcagccggaatgtgacctgcagctgggctgccaggagctggccccg
gggcaccaggaggtggaggagagcttcctgtag
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