KEGG   Lagopus muta (rock ptarmigan): 125700294
Entry
125700294         CDS       T09141                                 
Symbol
SQSTM1
Name
(RefSeq) sequestosome-1 isoform X1
  KO
K14381  sequestosome 1
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut04137  Mitophagy - animal
lmut04140  Autophagy - animal
lmut04217  Necroptosis
lmut04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    125700294 (SQSTM1)
   04137 Mitophagy - animal
    125700294 (SQSTM1)
  09143 Cell growth and death
   04217 Necroptosis
    125700294 (SQSTM1)
   04218 Cellular senescence
    125700294 (SQSTM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lmut04131]
    125700294 (SQSTM1)
   03029 Mitochondrial biogenesis [BR:lmut03029]
    125700294 (SQSTM1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lmut04147]
    125700294 (SQSTM1)
Membrane trafficking [BR:lmut04131]
 Autophagy
  Mitophagy
   Cargo receptors
    125700294 (SQSTM1)
  Pexophagy
    125700294 (SQSTM1)
  Aggrephagy
    125700294 (SQSTM1)
  Xenophagy
    125700294 (SQSTM1)
  ER-phagy
   ER-phagy recepters
    125700294 (SQSTM1)
  Other autophagy associated proteins
   Midbophagy
    125700294 (SQSTM1)
Mitochondrial biogenesis [BR:lmut03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    125700294 (SQSTM1)
Exosome [BR:lmut04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   125700294 (SQSTM1)
SSDB
Motif
Pfam: UBA_5 ZZ PB1
Other DBs
NCBI-GeneID: 125700294
NCBI-ProteinID: XP_048816709
LinkDB
Position
14:complement(13143432..13147842)
AA seq 453 aa
MAALTVKAYLLGKEDATREIRRFSLMPPVRYQAVHDRVAELFQGLLRAGPPPAFRMHYKD
EDGDLIAFSTDEELDMAMPYVQDGVFRVYIREKKECRREHRSQCSQEPPRDMVHPNVICD
GCEGPVVGARFKCTVCPDYDLCSTCEGKGIHKEHNMVMFQSPLLNPFEWLPRGRWLRKMR
HGVPPFPWMHCWGYPGPAAPCQNSEQAQASAAASSPPAAGEASTNSQPQDPNVTFLKNVG
ESVAAFLSPLGIEVDIDVEHGGQRSKVTPAPPNQESNNAESSSSTLNQNSQTKPYWNSTD
SATVVSNVAEQIQDMVIDPVPTQMEDGSLQSQEHSESSSSSGGDEDWTHLSSKEVDPSTG
ELQSLQMPETDDPRSLDVAQEAPQAGPTGLREAALYPHLPPEADPRLIESLSQMLSMGFS
DEGGWLTRLLQTKNCDIGAALDAIQYFKQPPNL
NT seq 1362 nt   +upstreamnt  +downstreamnt
atggcggcgctgacggtgaaagcctacctgctgggcaaggaagatgcgacccgcgagatc
cgccgcttctccctgatgccgcccgtccgctatcaggccgtccacgaccgcgtcgccgag
ctcttccaggggctgctgcgggccgggccgccgcccgcgttccgcatgcactataaggat
gaagacggggacctgatcgcgttctctaccgacgaggagctggatatggccatgccttat
gtgcaggacggggtcttccgcgtgtacatcagagagaaaaaggagtgcaggcgtgaacat
cgctcgcagtgcagccaggagcctccccgtgacatggtgcaccccaacgtcatctgcgac
ggctgcgaggggccggtggtgggtgctcgcttcaagtgcaccgtctgccctgactacgac
ctgtgcagcacctgcgaggggaaaggcatccacaaggagcacaacatggtgatgtttcag
agcccgctgctgaatccgtttgagtggcttcccagagggcgctggctccgtaagatgcgg
cacggcgttccgcccttcccctggatgcactgctgggggtatcctggacctgcagctcca
tgccagaactcggaacaagcccaagccagtgctgctgcctccagtccacccgctgctgga
gaagcttctactaacagccagccccaggaccccaatgtcaccttcttaaagaacgttggg
gagagtgtggcagcttttctgagccccctgggtattgaagttgatatcgatgtggaacat
ggaggacagagaagcaaagtgactcctgctcctcctaatcaagagagtaacaatgctgag
tcaagcagcagtactcttaaccagaacagccagaccaaaccatactggaatagcacagat
tctgctacggtagtaagcaatgttgcagagcagatacaagatatggtgatagatcctgtg
cccacacagatggaagatggcagcctccagtcccaggaacacagcgagtcaagcagttca
tcagggggtgatgaggactggacccacttatcttccaaagaagtggatccttccacaggt
gaactgcagtctctacaaatgccagagacagatgatcccagatccctagatgtagctcag
gaagctccccaggcaggacctacagggctgagagaggctgcactctacccacatctccca
ccagaagcagaccctcgcttgattgaatccctgtcccagatgctctctatgggcttctct
gatgagggtggatggctcactcgactcctgcagacaaagaactgtgacatcggggcagca
ctagatgccatccagtatttcaagcagcctcctaacttgtag

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