Lagopus muta (rock ptarmigan): 125700597
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Entry
125700597 CDS
T09141
Symbol
PDGFA
Name
(RefSeq) platelet-derived growth factor subunit A isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04010
MAPK signaling pathway
lmut04020
Calcium signaling pathway
lmut04510
Focal adhesion
lmut04540
Gap junction
lmut04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125700597 (PDGFA)
04020 Calcium signaling pathway
125700597 (PDGFA)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125700597 (PDGFA)
04540 Gap junction
125700597 (PDGFA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
125700597 (PDGFA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lmut04052
]
125700597 (PDGFA)
00536 Glycosaminoglycan binding proteins [BR:
lmut00536
]
125700597 (PDGFA)
Cytokines and neuropeptides [BR:
lmut04052
]
Cytokines
Growth factors (RTK binding)
125700597 (PDGFA)
Glycosaminoglycan binding proteins [BR:
lmut00536
]
Heparan sulfate / Heparin
Growth factors/receptors
125700597 (PDGFA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
KH_PARP14_8
Motif
Other DBs
NCBI-GeneID:
125700597
NCBI-ProteinID:
XP_048817453
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Position
15:13276376..13310113
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AA seq
237 aa
AA seq
DB search
MRTWACVLLIGFGYLSFTSCEEAEIPQELIERLAHSEIHSIRDLQRLLEIDSVGYDDVSE
ANLRSYSVHSAKHVQENRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQIDPTSANFLIW
PPCVEVKRCTGCCNTSSVKCQPSRIHHRSVKVAKVEYVRKKPKLKEVLVRLEEHMECTCT
STNTNSDYREEETGETEAWRRDCARSHSKAMAEPGIGLRSECSSSALNHTTIFPFQE
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaggacctgggcttgcgttttgctgataggttttggctacctgtcctttacctcctgc
gaggaggccgagatcccgcaggagctgatcgagcggctggcgcacagcgagatccacagc
atccgcgacttgcagcgcctcctggagattgactccgtaggatatgatgatgtttcagag
gcaaacttgaggtcttatagtgttcattctgctaaacatgtgcaagagaaccgtcctgtg
cccattcgcagaaaaagaagcattgaggaagccatcccggctgtctgcaaaacacggacg
gtgatatatgagatacctcggagtcagattgatcccacctcggccaacttcctgatatgg
ccgccgtgtgtggaggtgaagcgctgcactggctgctgcaacaccagcagtgtgaaatgc
cagccctcacggatacatcacagaagtgtcaaggtggcaaaagtggaatatgttagaaaa
aagccaaaattaaaagaagttctggtgagattagaagagcatatggaatgcacctgtaca
tcaacaaatactaattcagattatagagaagaagaaactggcgagaccgaggcatggaga
cgtgactgtgcaaggtcacacagcaaggctatggcagaaccagggataggactcagatct
gagtgctcatccagtgccctaaatcacacgaccatctttcctttccaagaatga
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