Lagopus muta (rock ptarmigan): 125700634
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Entry
125700634 CDS
T09141
Symbol
ACTB
Name
(RefSeq) actin, cytoplasmic 1
KO
K05692
actin beta/gamma 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03082
ATP-dependent chromatin remodeling
lmut04145
Phagosome
lmut04210
Apoptosis
lmut04510
Focal adhesion
lmut04520
Adherens junction
lmut04530
Tight junction
lmut04810
Regulation of actin cytoskeleton
lmut04814
Motor proteins
lmut04820
Cytoskeleton in muscle cells
lmut05132
Salmonella infection
lmut05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125700634 (ACTB)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125700634 (ACTB)
09143 Cell growth and death
04210 Apoptosis
125700634 (ACTB)
09144 Cellular community - eukaryotes
04510 Focal adhesion
125700634 (ACTB)
04520 Adherens junction
125700634 (ACTB)
04530 Tight junction
125700634 (ACTB)
09142 Cell motility
04814 Motor proteins
125700634 (ACTB)
04820 Cytoskeleton in muscle cells
125700634 (ACTB)
04810 Regulation of actin cytoskeleton
125700634 (ACTB)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
125700634 (ACTB)
09171 Infectious disease: bacterial
05132 Salmonella infection
125700634 (ACTB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmut03021
]
125700634 (ACTB)
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125700634 (ACTB)
03036 Chromosome and associated proteins [BR:
lmut03036
]
125700634 (ACTB)
03029 Mitochondrial biogenesis [BR:
lmut03029
]
125700634 (ACTB)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lmut04812
]
125700634 (ACTB)
04147 Exosome [BR:
lmut04147
]
125700634 (ACTB)
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125700634 (ACTB)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
125700634 (ACTB)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
125700634 (ACTB)
NuA4 complex
125700634 (ACTB)
Chromatin remodeling factors
BAF complex
125700634 (ACTB)
PBAF complex
125700634 (ACTB)
GBAF(ncBAF) complex
125700634 (ACTB)
SWR1 complex
125700634 (ACTB)
Mitochondrial biogenesis [BR:
lmut03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
125700634 (ACTB)
Cytoskeleton proteins [BR:
lmut04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
125700634 (ACTB)
Exosome [BR:
lmut04147
]
Exosomal proteins
Proteins found in most exosomes
125700634 (ACTB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
125700634
NCBI-ProteinID:
XP_048817545
LinkDB
All DBs
Position
15:11116381..11120567
Genome browser
AA seq
375 aa
AA seq
DB search
MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgatattgcagcgctcgttgttgacaatggctccggtatgtgcaaggccggt
ttcgccggggacgatgctccccgtgctgtgttcccatccatcgtgggtcgccccagacat
cagggtgtgatggttggtatgggccagaaagacagctatgttggtgatgaagcccagagc
aaaagaggtatcctgaccctgaagtatcccattgaacacggtattgtcaccaactgggat
gatatggagaagatctggcaccacaccttctacaatgagctgagagtagcccctgaggag
caccctgtgctgctcacagaggctcccctgaaccccaaagccaacagagagaagatgaca
cagatcatgtttgagaccttcaacaccccagccatgtatgtagccatccaggctgtgctg
tccctgtatgcctctggtcgtaccactggtattgtgatggactctggtgatggtgttacc
cacactgtgcccatctatgaaggctatgccctcccccatgccatcctccgtctggatctg
gctggccgtgacctgacggactacctcatgaagatcctgacagagagaggctacagcttc
accaccacagccgagagagaaattgtgcgtgacatcaaggagaagctgtgctacgtcgcg
ctggatttcgagcaggagatggccacagctgcctctagctcctccctggagaagagctac
gaactccctgatggtcaagtcatcaccattggcaatgagaggttcaggtgccctgaggcc
ctcttccagccatctttcttgggtatggagtcctgtggtatccatgaaactaccttcaac
tcaatcatgaagtgtgatgtggatatccgtaaggacctgtatgccaacacagtgctgtct
ggtggtaccacaatgtaccctggcattgctgacaggatgcagaaggagatcacagccctg
gcacctagcacaatgaaaatcaagatcattgccccacctgagcgcaagtactctgtctgg
attggaggctctatcctggcctctctgtccaccttccagcagatgtggatcagcaagcag
gagtacgatgaatccggaccctccattgtccaccgcaaatgcttctaa
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