KEGG   Lagopus muta (rock ptarmigan): 125700634
Entry
125700634         CDS       T09141                                 
Symbol
ACTB
Name
(RefSeq) actin, cytoplasmic 1
  KO
K05692  actin beta/gamma 1
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut03082  ATP-dependent chromatin remodeling
lmut04145  Phagosome
lmut04210  Apoptosis
lmut04510  Focal adhesion
lmut04520  Adherens junction
lmut04530  Tight junction
lmut04810  Regulation of actin cytoskeleton
lmut04814  Motor proteins
lmut04820  Cytoskeleton in muscle cells
lmut05132  Salmonella infection
lmut05164  Influenza A
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125700634 (ACTB)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125700634 (ACTB)
  09143 Cell growth and death
   04210 Apoptosis
    125700634 (ACTB)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125700634 (ACTB)
   04520 Adherens junction
    125700634 (ACTB)
   04530 Tight junction
    125700634 (ACTB)
  09142 Cell motility
   04814 Motor proteins
    125700634 (ACTB)
   04820 Cytoskeleton in muscle cells
    125700634 (ACTB)
   04810 Regulation of actin cytoskeleton
    125700634 (ACTB)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    125700634 (ACTB)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    125700634 (ACTB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lmut03021]
    125700634 (ACTB)
   03019 Messenger RNA biogenesis [BR:lmut03019]
    125700634 (ACTB)
   03036 Chromosome and associated proteins [BR:lmut03036]
    125700634 (ACTB)
   03029 Mitochondrial biogenesis [BR:lmut03029]
    125700634 (ACTB)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lmut04812]
    125700634 (ACTB)
   04147 Exosome [BR:lmut04147]
    125700634 (ACTB)
Transcription machinery [BR:lmut03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     125700634 (ACTB)
Messenger RNA biogenesis [BR:lmut03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     125700634 (ACTB)
Chromosome and associated proteins [BR:lmut03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     125700634 (ACTB)
    NuA4 complex
     125700634 (ACTB)
  Chromatin remodeling factors
   BAF complex
    125700634 (ACTB)
   PBAF complex
    125700634 (ACTB)
   GBAF(ncBAF) complex
    125700634 (ACTB)
   SWR1 complex
    125700634 (ACTB)
Mitochondrial biogenesis [BR:lmut03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    125700634 (ACTB)
Cytoskeleton proteins [BR:lmut04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     125700634 (ACTB)
Exosome [BR:lmut04147]
 Exosomal proteins
  Proteins found in most exosomes
   125700634 (ACTB)
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 125700634
NCBI-ProteinID: XP_048817545
LinkDB
Position
15:11116381..11120567
AA seq 375 aa
MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggatgatgatattgcagcgctcgttgttgacaatggctccggtatgtgcaaggccggt
ttcgccggggacgatgctccccgtgctgtgttcccatccatcgtgggtcgccccagacat
cagggtgtgatggttggtatgggccagaaagacagctatgttggtgatgaagcccagagc
aaaagaggtatcctgaccctgaagtatcccattgaacacggtattgtcaccaactgggat
gatatggagaagatctggcaccacaccttctacaatgagctgagagtagcccctgaggag
caccctgtgctgctcacagaggctcccctgaaccccaaagccaacagagagaagatgaca
cagatcatgtttgagaccttcaacaccccagccatgtatgtagccatccaggctgtgctg
tccctgtatgcctctggtcgtaccactggtattgtgatggactctggtgatggtgttacc
cacactgtgcccatctatgaaggctatgccctcccccatgccatcctccgtctggatctg
gctggccgtgacctgacggactacctcatgaagatcctgacagagagaggctacagcttc
accaccacagccgagagagaaattgtgcgtgacatcaaggagaagctgtgctacgtcgcg
ctggatttcgagcaggagatggccacagctgcctctagctcctccctggagaagagctac
gaactccctgatggtcaagtcatcaccattggcaatgagaggttcaggtgccctgaggcc
ctcttccagccatctttcttgggtatggagtcctgtggtatccatgaaactaccttcaac
tcaatcatgaagtgtgatgtggatatccgtaaggacctgtatgccaacacagtgctgtct
ggtggtaccacaatgtaccctggcattgctgacaggatgcagaaggagatcacagccctg
gcacctagcacaatgaaaatcaagatcattgccccacctgagcgcaagtactctgtctgg
attggaggctctatcctggcctctctgtccaccttccagcagatgtggatcagcaagcag
gagtacgatgaatccggaccctccattgtccaccgcaaatgcttctaa

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