Lagopus muta (rock ptarmigan): 125702011
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Entry
125702011 CDS
T09141
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut00514
Other types of O-glycan biosynthesis
lmut04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
125702011 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125702011 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lmut01003
]
125702011 (RFNG)
Enzymes [BR:
lmut01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
125702011 (RFNG)
Glycosyltransferases [BR:
lmut01003
]
Glycan extension
O-Glycan
125702011 (RFNG)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
125702011
NCBI-ProteinID:
XP_048820699
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Position
18:4971213..4979138
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AA seq
418 aa
AA seq
DB search
MSGSCLGLRRACFLLSVTAAAVLLLLLPRGQPPAAPRRRPPPAGPSGAVPKREARPAGSG
APGERSGGSGAAGGGRGVGGSPWPARRVRLGPPGGSGRESLELKDIFIAVKTTRKYHKTR
LELLFQTWISRARGQTFIFTDWEDRELRLKAGDHMINTNCSAVHTRQALCCKMSVEYDKF
LESGQKWFCHVDDDNYVNPRTLLRLLSAFSPSQDVYVGRPSLDHPIEAADHVQSDGSKTS
VKFWFATGGAGFCISRGLALKMSPWASLGNFISTAERVRLPDDCTIGYIIEGLLEVKLLH
SPLFHSHLENLQRLQGDSVLQQVTLSYGDPENKHNVVSVGGVFGLQQDPTRHIYKRRSTL
YRSKTDWVIMARRHLFSCSLGHSREENLLCLVLWSSGSSYDGCSHSCTSHFMLSSDVT
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgagcggctcctgcctggggctccgcagagcctgcttcctgctgtccgtcaccgccgct
gccgtcctcctcctgctgctgccccgcgggcagccccccgccgcgccccgccgccgcccg
ccgcccgccgggcccagtggagccgtcccgaagcgggaggcgcggcccgcggggagcggc
gcgcccggggagcgaagcggcggctcgggggccgctgggggcggccggggcgtcggcggc
agcccgtggcctgcgaggagggtccgcctggggccgcccggcggctcgggcagggagagc
ctggagttgaaggacatctttattgcggtgaaaacgacgaggaagtatcacaagacgcgg
ctggagctgctgttccaaacctggatctcccgggcgagaggacagacgttcatattcaca
gactgggaggatcgagagctgcgcctgaaagcaggggatcatatgatcaacaccaactgt
tctgctgtccacacccgccaagctctgtgctgcaagatgtctgtggaatatgataaattc
ctagaatctggacaaaagtggttttgccatgtggatgatgacaactatgtgaatccacgg
actctcctgcgtctcttatctgccttctctcctagccaggatgtctatgtggggcgaccg
agcctggaccaccccatcgaagcagctgaccacgtccaaagcgatggatcaaagacaagc
gtgaaattctggtttgccacaggtggagcaggattctgtatcagcagaggtcttgctctg
aagatgagtccctgggccagcctgggtaacttcatcagcactgcagaaagagtgcgtctt
cctgatgactgcacgattggctacatcattgaagggctgcttgaagtaaagctgctgcac
agcccgttgttccattcccatctggaaaatctgcagagactgcagggcgactctgtgctg
caacaggtaactctcagttatggggaccccgagaacaaacacaatgttgtgagtgtggga
ggagtgtttggacttcagcaagacccaaccagacatatctacaaaaggaggtcaactttg
tacagaagcaagactgactgggtaattatggcaagaaggcatttattcagctgcagcctg
ggacattccagagaagaaaatcttctatgtcttgttctttggtccagtggctcttcatat
gatggctgcagtcatagctgtacaagtcactttatgctttcatctgatgtcacatga
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