Lagopus muta (rock ptarmigan): 125703890
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Entry
125703890 CDS
T09141
Symbol
KDM1A
Name
(RefSeq) lysine-specific histone demethylase 1A isoform X1
KO
K11450
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:
1.14.99.66
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125703890 (KDM1A)
Enzymes [BR:
lmut01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.66 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
125703890 (KDM1A)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
125703890 (KDM1A)
REST complex
125703890 (KDM1A)
Histone demethylases
125703890 (KDM1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
Pyr_redox_2
Pyr_redox
AlaDh_PNT_C
FAD_binding_2
FAD_oxidored
HI0933_like
FAD_binding_3
Thi4
Pyr_redox_3
2-Hacid_dh_C
DUF6827
Sec10_N
MurD-like_N
GIDA
Lycopene_cycl
IlvN
Motif
Other DBs
NCBI-GeneID:
125703890
NCBI-ProteinID:
XP_048824929
LinkDB
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Position
23:complement(2003911..2033663)
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AA seq
846 aa
AA seq
DB search
MLAGGKKAAEAAGGEGGPEAPVPPSAAVGALGSSAESGGAGERTPRKKEPPRASPPGGAS
EPPAAPASGGETTGIAETPEGRRTSRRKRAKVEYREMDESLANLSEDEYYSEEERNAKAE
KEKKLPPPPPPAPAEEENESEPEEPSGQAGGLQDDNSGGYGDGQASGVEGAAFQSRLPHD
RMTSQEAACFPDIISGPQQTQKVFLYIRNRTLQLWLDNPKIQLTFEATIQQLEAPYNSDT
VLVHRVHSYLERHGLINFGIYKRVKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTV
LEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEAN
GQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEKHVKDE
QIEHWKKIVKTQEELKDLLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRD
LTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLST
LSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVN
TRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCF
DRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGR
CLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPAI
PGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQPTPGVPT
QQATSI
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgctggccgggggaaagaaggccgcggaggcggcgggcggcgagggcgggcccgaggct
ccggtgcctccgtcagctgctgtaggagcgctgggttcctctgctgagagcggcggggcc
ggggagcgcactcctcgtaagaaggagccgcctcgggcctcgcccccgggaggtgcgtcc
gagccgcccgccgcccccgcgtccggcggcgaaaccaccggcatcgcagagacccccgag
ggccgccggacaagccgccgcaagcgggccaaggtagagtatagagagatggatgagagc
cttgcaaatctctcagaagatgaatattactctgaagaagagagaaatgctaaagctgag
aaagagaagaagctgccacctccacctccacctgctcctgcagaagaagagaatgaaagt
gagcccgaggagccatctgggcaagcaggaggacttcaagacgacaattctggagggtat
ggagacggccaagcatcaggtgtggagggtgcagctttccagagtagacttccacatgac
cgtatgacatctcaagaagctgcctgcttccctgatataatcagtgggccacagcagact
cagaaggtgtttctgtacatcaggaaccgcaccctgcagctctggttggataacccaaag
attcagttgacatttgaggcaactatccagcaattagaagcaccttacaatagtgatacg
gtgctcgttcacagggtgcacagctatctggagcggcatgggctgatcaacttcggcatc
tacaagagagtgaagcctcttccaaccaagaagactgggaaggtgatcatcattgggtct
ggtgtgtctgggttggcagcagctcgccagttgcagagttttggcatggatgtcacagtt
ctggaagccagggaccgagtgggaggaagagtcgctacctttcgtaaagggaactacgtg
gctgatttgggagcaatggtggtaacaggacttggaggaaatcccatggctgtggtcagc
aaacaagtgaacatggagttggctaagatcaaacagaagtgcccactgtatgaagcaaat
ggacaagctgttccaaaagagaaagatgaaatggtggagcaagaattcaatcgtctgttg
gaagccacctcttatctcagtcatcagctggattttaatgttctcaataataagcctgtc
tccctaggtcaggctctggaggttgtcatacaattgcaggagaaacacgtgaaggatgag
cagattgaacactggaaaaaaattgtgaaaacacaggaggaattgaaagatcttcttaac
aagatggtaaatttgaaagagaagattaaagagctccaccagcagtataaggaagcatca
gaagtgaagccacctcgggatattacagcagagttccttgtgaagagtaaacacagagat
ctgactgcactttgcaaggagtatgatgaattggcagaaacacaagggaagctggaagag
aagctgcaggaacttgaagccaatcctccaagtgatgtttatctgtcttcaagggatagg
caaatacttgactggcattttgcaaacctggaatttgctaatgctacacctctctctaca
ctttcactgaagcactgggaccaggacgatgactttgaattcacaggcagccacctgacg
gtgaggaatggctattcctgcgtgcctgtggccttggcagaggggttggatattaagttg
aacacagcagttcggcaggttcgctatacagcttcaggctgtgaagtgattgctgtaaac
actcgatctaccagccagactttcatttataaatgtgatgcagtgctgtgtacccttccc
ttgggagtcctgaagcagcagcctccagcagtacagtttgtgccacctctccctgagtgg
aaaacttcagctgtgcaacgtatgggatttggcaaccttaacaaggttgtgctgtgtttt
gatcgtgtcttctgggatccaagtgtcaatttgtttggtcacgttggtagcactactgca
agcagaggggaacttttcttgttttggaacctgtacaaagcacccattttgttggccttg
gtagcaggagaagcagcaggaatcatggaaaatatcagtgatgatgtcattgttggacga
tgcctcgccatcctcaaaggcatatttggcagcagtgctgtgccacagcccaaagagact
gtggtctcccgttggcgtgctgatccgtgggcccggggctcatactcctatgtagcagct
ggatcttctggaaatgactatgacttgatggctcaaccaattactccagggccagccatt
ccaggtgctccacagcccattcctcgcctgttttttgcaggagagcacacgattcgcaac
taccctgccactgtgcatggtgctttgctgagtggactaagagaagcagggcgcattgca
gaccaatttcttggggccatgtatactttgccccgccagcctacacctggggtgcccaca
caacaagctaccagcatctaa
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