Labrys sp. KNU-23: FZC33_05340
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Entry
FZC33_05340 CDS
T06193
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lne
Labrys sp. KNU-23
Pathway
lne01501
beta-Lactam resistance
lne01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lne00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FZC33_05340
01503 Cationic antimicrobial peptide (CAMP) resistance
FZC33_05340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lne03036
]
FZC33_05340
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lne02000
]
FZC33_05340
01504 Antimicrobial resistance genes [BR:
lne01504
]
FZC33_05340
Chromosome and associated proteins [BR:
lne03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
FZC33_05340
Transporters [BR:
lne02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FZC33_05340
Antimicrobial resistance genes [BR:
lne01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FZC33_05340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
Beta-barrel_RND_2
HH_EMRA
HH_YBHG
BSH_CzcB
BSH_CusB
YknX_C
HH_AAEA_pHBA
HH_AprE
TPR_MLP1_2
HH_CzcB
BSH_YknX
Sos7
Motif
Other DBs
NCBI-ProteinID:
QEN85659
LinkDB
All DBs
Position
2:1210385..1211605
Genome browser
AA seq
406 aa
AA seq
DB search
MHMLGRAGLLSVCILVAGCNQGQQENQPPAGAARPQVSVVTLHPRAVAITAELPGRVGAS
LTADVVPQVTGIIKTRLFKEGTEVKAGDPLYQIDPASYQASYDSAEATLQKDQAAIPSAQ
AKVDRYQNLIKQNAVSSQDLDDARATLAQAKADVAAAKAALETARINLDYTTMKAPIGGR
VDASTITEGALVSSGQSTALTTIRQLDPINVDVTESSANLLNFLEAVKSGRIKTAGPDIS
VKLKLENGTTYAHSGTLRFVEANVSTTTGTFTVRAEFPNPDRLLLPGMYARAILEVGLAQ
DSFLVPQRAVSHNTRGEATASFVGSDGKVVQRVLSIQRSVSNNWLVDAGVSDGDRVIVEG
TQLVRAGQDVTATEVSVDDATGDIRPLSQSSALDKPPVASAPVRAE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcacatgcttggtcgggccggcctcctatccgtctgcattctggtcgctggctgcaac
caggggcagcaagagaaccaaccaccggccggcgccgcccgcccccaggtcagcgtggtc
acgctccatccacgcgccgtcgccatcacggcggaactgccgggacgcgtcggggcctcg
ctgacggccgacgtcgtcccgcaggtgaccggcatcatcaagacgcgcctgttcaaggaa
ggcaccgaggtcaaggccggcgacccgctctaccagatcgaccccgcgagctaccaggca
agctatgacagcgccgaggccaccctgcagaaggaccaggccgccattcccagcgcccag
gccaaggtcgaccgctaccagaatctcatcaagcagaacgccgtcagcagccaggacctc
gacgatgcccgcgccacgctggcccaggccaaggccgatgtcgctgccgccaaggctgcg
ttggagacggcccgcatcaacctcgactacaccacgatgaaggcaccgatcggcggccgg
gtcgatgcctccaccatcaccgagggcgccctggtcagttcgggccagtcgactgcgctg
acgacgattcgccaactcgatccgatcaatgtcgacgtgacggaatcgagcgcaaatctg
ctgaacttcctggaggcagtgaagtcgggccggatcaagaccgcaggcccggacatctcc
gtcaagctcaagctggaaaacggcacgacctacgcgcattccggcacgcttcgtttcgtg
gaggccaatgtcagcaccaccaccggcaccttcactgtccgggccgaattccccaatccc
gatcgcctgctcctgccgggcatgtatgcccgcgccatcctcgaggtcggtctggcccag
gacagtttcctggtgccgcagcgggctgtcagccacaacaccaggggcgaggcgacagca
agcttcgtcggcagcgacggcaaggtcgtccagcgcgtactctcgattcagcgcagtgtc
agcaacaactggcttgtcgatgccggcgtatcggacggcgacagggtgatcgtcgaaggc
acccagctggtgcgggccggccaggacgtgacggccaccgaggtgagcgtggacgatgcc
accggcgatatccgcccgctctcccagagctcggccctcgacaagccaccggtcgcttcg
gcaccggtccgggccgaatag
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