Labrys sp. KNU-23: FZC33_28105
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Entry
FZC33_28105 CDS
T06193
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lne
Labrys sp. KNU-23
Pathway
lne01501
beta-Lactam resistance
lne01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lne00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FZC33_28105
01503 Cationic antimicrobial peptide (CAMP) resistance
FZC33_28105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lne03036
]
FZC33_28105
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lne02000
]
FZC33_28105
01504 Antimicrobial resistance genes [BR:
lne01504
]
FZC33_28105
Chromosome and associated proteins [BR:
lne03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
FZC33_28105
Transporters [BR:
lne02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FZC33_28105
Antimicrobial resistance genes [BR:
lne01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FZC33_28105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
BSH_CusB
RND-MFP_C
BSH_RND
CzcB_C
BSH_YknX
Biotin_lipoyl
QRPTase_N
DUF2118
Peptidase_M23
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
QEN89937
LinkDB
All DBs
Position
1:4041153..4042517
Genome browser
AA seq
454 aa
AA seq
DB search
MSAVEKQNRPERDGERQRREEGFGDEASLTAVRLSKHAQQAPTDYRRTPWYTKLTILVLV
VIAVATALYAYREPLMARLNPPPPPVVDAKPPAVTVTPATTGAITEHAVVTGNLVAREEI
LVSPQIEGYAVDKIMVEEGDRVSEGQVLAELSTTTIDTSLAQNEAQTARAEAAIAQAESA
IAEAKANQDQTTSAYARSKALVRTGNTTAEQLDQREAAAKMADARAAAAEHALTVAKADK
KLADAQRSELMVRLEHTKVRAPAAGVISRRTARIGAIASASGDPLFRIIRDGDVELEADV
PEATLARIRSGMAAEVTTAGRKEPFVARVRLVSPEVNSVTRLGRVRIAIDQAPGLTIGAF
SRASVAVASRTGVLVPQSAVLYTEDGATVQIVHDGVVATTPVKLGLRTEKQAEVVEGVKA
GDTVIATAGTFVRDGDKVSAVGGAGKAQPATESE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcggttgaaaaacagaaccggcccgagcgcgatggcgagcggcagcggcgggag
gaaggttttggcgacgaggcgagcctgacggcggtgcgtctgtccaagcacgcccagcag
gcgccgaccgattatcggcgaaccccctggtacaccaagctcaccatcctggtgcttgtc
gtcatcgctgtggctacggctctctatgcctatcgcgagcccctgatggcccgcctcaac
ccgccaccgccgcctgtggtggatgccaagccaccggccgtcaccgtgacgccggccacg
accggtgccatcaccgagcatgcggtggtgaccggcaacctggtcgcacgcgaggagatc
ctggtgtcgccccagatcgaaggttacgcggtcgacaagatcatggtggaggaaggcgat
cgcgtcagcgaaggccaggtgctggcagaactctcgaccacgaccatcgacacctcgctt
gcccagaacgaggctcagaccgccagggcggaggctgcgatcgcgcaggccgagagcgcc
attgccgaggccaaggccaatcaggatcagacgaccagcgcctatgcgcgttccaaggcc
ctggtccggaccggcaacaccacggccgaacaactcgaccagcgtgaagccgccgccaag
atggcggatgcgcgtgcggcggcggccgagcacgccctgaccgtggccaaggccgacaag
aagctcgcagatgcccagcgttccgaattgatggtgcgcctggagcacaccaaggtgcgt
gcgccggcggcgggcgtgatcagccgccggactgctcgtatcggcgcgatcgcgtcggcg
tccggcgaccccctgttccgtatcattcgcgacggcgacgtcgagcttgaagcggatgta
ccggaggcgacgctggcgcgcatccggtccggcatggcggccgaagtgaccacggcgggc
cgcaaggaacccttcgtggctcgcgtgcgcctggtttcgcccgaggtcaattccgtcacg
cgcctggggcgtgtgcgcatcgccatcgaccaggcaccgggcctgacgatcggtgccttt
agccgtgccagcgtggcggttgccagccgcacgggtgtgctcgtgccgcagtcggccgtg
ctctataccgaggacggcgcgacggtgcagatcgtgcatgacggcgtcgtggcgaccacg
ccggtcaagctcggcctgcgcacggaaaagcaggcggaggtggtcgagggcgtcaaggcc
ggcgacacggtgatcgccaccgccggcaccttcgtgcgcgacggcgacaaggtcagcgcc
gtcggcggggcgggcaaagcccagcccgcgaccgagtccgagtga
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