Loa loa (eye worm): LOAG_09394
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Entry
LOAG_09394 CDS
T02664
Name
(RefSeq) U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
loa
Loa loa (eye worm)
Pathway
loa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LOAG_09394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
loa03041
]
LOAG_09394
Spliceosome [BR:
loa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
LOAG_09394
Complex C
U5 SnRNP specific factors
LOAG_09394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
MMR_HSR1
EFG_III
EFL1
Septin
Roc
EF-G_D2
Ras
TniB
Motif
Other DBs
NCBI-GeneID:
9946832
NCBI-ProteinID:
XP_003144969
UniProt:
A0A1S0TS49
LinkDB
All DBs
AA seq
978 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDEEEEDTLTSSVQKLDDDGKEEEEDDEAVNEDADQIPSNQ
IVLHEDKKYYATAMEIYGEDVETIVQEEDAQPLTEPIIKSVKQRKFQALEHALPETAYNK
EYLADLMDCPHVMRNIAIVGHLHHGKTTFIDCLMEQTHPDFVRGEDSDTRYTDTLFIEQQ
RGCSIKATPITVVMQDSRQKSFLLNIIDTPGHVNFSDEVTAAYRLSDGAVIVVDAHEGVM
LQTERVIRHAVQERLPVTVCINKIDRLILELKLPPTDAYYKLRFVLDQINSLLQTFSDEN
EAMKVSPLLSNVVFASSRYNICFSLRSFAELYASSYGTFIGEEFAKHLWGDQYFDKKTRK
FMKKPPHQGASRSFVEFVLEPLYKIFSQVVGDVDTCLPSIMAELNIKLTKEEQRMNVRPL
IALICRRFFGDFNSFVDLVTQNIKSPSDNAGTKVEHTYLGPMDSKLAQALMKCDADGPLM
VHTTKNYATTDATSFHVFGRVISGTLHAGQDVRILGENYSIQDEEDCRIMTVGRLWISVA
RYSMEVSRVPAGNWVLIEGIDQPVVKTSTIMQVEYDEDVYIFRPLKFNTKSVVKLAVEPI
NPSELPKMLDGLRKVNKSYPLLTTRVEESGEHVMLGTGELYMDCVMHDMRKVFSEIDIKV
ADPVVSFCETVVETSSLKCFAETPNKKNKLTMIAEPLEKGLAEDIENEVVQIGWNRKRLG
EFFQTKYDWDLLAARSIWAFGPDATGPNVLLDDTLPSEVDKQLLGTVRESLVQGFQWATR
EGPLCEEPIRNVKFKMLDAVIASEPLYRGGGQIIPTARRCAYSAFLMATPRLMEPYYFVE
VTAPADCVSSVYTVLAKRRGHVTTDAPIPGSPLYTIKAYIPVIDSFGFETDLRTHTQGQA
FCLAVFSHWQIVPGDPLDKSIVIRPLELQPAPHLAREFMIKTRRRKGLSEDVSVNKFFDD
PMLLELAKQQDVFSYTNF
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggatacagacttatatgacgaatttggtaattatataggacctgaattggattcggat
gatgaggaagaagaggatactcttacttcaagtgttcagaaattggatgacgatggaaag
gaggaagaggaggatgatgaggcagtgaatgaagatgcggatcaaataccgtctaatcaa
attgtattgcatgaagataagaaatattatgcgacagcgatggaaatttatggcgaggac
gttgaaacaatcgtccaagaagaagatgctcaacccttaacggagccaatcataaagtct
gtaaaacaacggaaatttcaagcacttgaacatgccttaccagaaacagcatacaataag
gagtatctcgctgatctgatggactgtccgcatgttatgcggaacattgcaatcgttggc
caccttcatcatggaaaaactactttcatcgactgtttaatggaacaaacacatccagac
tttgtccgtggtgaagattcagacactcgttatactgatactttattcattgagcagcaa
cgcggatgcagtattaaagctacaccaattactgttgtcatgcaggattcacgtcaaaaa
agcttcttgttgaatataatcgatacaccgggacatgtcaatttctctgatgaagtgacg
gcagcataccgcttaagtgatggcgcggtaattgtcgtggatgcacatgaaggagtcatg
ttgcaaactgaaagagtgattcggcacgctgtgcaagaacgcttaccggttactgtttgc
ataaacaaaattgatcggttgatattagagctgaaattaccccccacagatgcttattat
aaacttcgctttgttctagatcagattaacagtttgcttcaaacgttcagcgacgaaaat
gaagcgatgaaagtatcacctttactcagcaatgtggttttcgctagttctaggtacaac
atatgcttttcgttgcgaagtttcgctgaactctacgccagtagctatgggacatttatt
ggagaagaatttgcaaaacatttatggggcgatcaatatttcgacaaaaagactcggaag
tttatgaaaaaaccgcctcatcaaggggcttcacgatcttttgtagaatttgttctcgaa
ccgctttataaaatattttctcaggttgttggcgatgtggatacatgcttgccatcaata
atggctgaactgaacattaaattgaccaaggaagagcagcgaatgaatgtacgaccacta
atcgccctgatttgtcgtcgtttttttggcgactttaactcctttgtcgatctcgttaca
caaaatatcaaatcaccgtcagataacgcaggcacgaaagtggagcatacttatttggga
ccgatggacagcaagttggcacaggcactcatgaaatgtgatgcggatggccctctcatg
gttcatacaacaaagaactacgcaacaactgatgctacatcatttcatgtttttggtcga
gttattagtggaacattacatgctggacaagacgttcgaattcttggtgagaattatagc
attcaagatgaagaggattgtaggattatgactgtgggtcgcctgtggattagcgttgca
aggtattcaatggaagtgtctcgtgttccagccggaaactgggtactgattgaagggatt
gatcagccagtcgtgaaaacatcgaccataatgcaagttgaatatgacgaagatgtttac
atattccgtcctttgaaatttaacacaaagtcggttgtcaagctcgcggtggaaccaatt
aatccttcggagcttccgaaaatgctcgatggtttgcgtaaagtcaacaaatcatatcca
ctactgacaactcgcgttgaagagtctggagaacacgttatgctcggtactggagaactt
tatatggactgcgtgatgcatgatatgcggaaggtattttcggaaatcgatatcaaagta
gctgatcctgttgtttctttctgtgaaaccgttgttgaaacatcgtccttgaaatgcttc
gccgaaacacctaataaaaaaaataaattaacgatgatagccgaaccactggaaaaaggt
cttgcggaagacatcgaaaacgaagtagtccaaattggatggaatagaaaacgtctcggt
gaatttttccagacaaagtatgattgggatttgctagcagctcgaagcatttgggcgttt
ggtccagatgcaactggaccaaacgtacttcttgatgatactctaccatctgaagttgat
aaacaattattgggaacagttcgtgaatcacttgtacaaggttttcagtgggctacacgt
gaggggccactttgcgaagagcctatacgtaatgttaaattcaaaatgttggatgcagtg
attgcaagtgagccgttataccgtggtggtggtcagattattccaacagctcgtcgatgc
gcatactccgctttcctgatggctactcctcgtttaatggaaccatattattttgtggaa
gtaacagcaccggcagactgtgttagttcggtgtatacagtattagcaaaacgacgtggt
cacgtgactactgatgcacctattcctggatcaccgctttatacaatcaaagcttacata
cctgtcatcgattcatttggtttcgaaactgatttgagaactcatactcaaggacaggca
ttttgtttagctgttttcagtcattggcagatagtaccaggagatccgttagataaaagt
atcgtgataaggcctctagaactccaacctgcaccccatctggctcgtgagttcatgata
aaaaccaggcgtcgaaaaggtctcagcgaggatgtttcagtaaacaaattctttgatgat
cctatgcttttagaattggcaaaacagcaggatgttttcagttataccaatttttaa
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