Loa loa (eye worm): LOAG_17508
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Entry
LOAG_17508 CDS
T02664
Name
(RefSeq) hypothetical protein
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
loa
Loa loa (eye worm)
Pathway
loa03018
RNA degradation
loa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LOAG_17508
09123 Folding, sorting and degradation
03018 RNA degradation
LOAG_17508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loa03019
]
LOAG_17508
03041 Spliceosome [BR:
loa03041
]
LOAG_17508
Messenger RNA biogenesis [BR:
loa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LOAG_17508
mRNA degradation factors
5'-3' decay
Lsm complex
LOAG_17508
Spliceosome [BR:
loa03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
LOAG_17508
Complex C
U2 snRNP components
LOAG_17508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LXG
Peptidase_M16_M
TIG_SUH
Glutaredoxin
DUF4941
CREPT
Motif
Other DBs
NCBI-GeneID:
9941643
NCBI-ProteinID:
XP_020306194
LinkDB
All DBs
AA seq
103 aa
AA seq
DB search
MTTEQGQTNVVSTGVEEPLDLIRLSLDERIYVKMRNDREVRGRLHAFDQHLNMILSQVEE
TVTTVELDEENFEEMHKQTKRQIPMLFVRGDAIILVAPPLRHT
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagagcagggacaaacaaatgtggtgagcacaggtgtagaagaaccattggat
ttaattcgattaagtttagatgaacggatttatgtgaaaatgcgcaatgatcgtgaggtc
cgaggtcgtttgcatgcgtttgatcaacatttaaacatgatattatctcaagtagaagag
acagtaaccaccgttgaattggacgaagaaaattttgaagaaatgcataaacagacgaaa
cgtcagataccgatgctgtttgttcgaggtgatgccattatacttgttgctccgcctctg
cgacatacataa
DBGET
integrated database retrieval system