Loa loa (eye worm): LOAG_18113
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Entry
LOAG_18113 CDS
T02664
Name
(RefSeq) hypothetical protein
KO
K13138
integrator complex subunit 1
Organism
loa
Loa loa (eye worm)
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
loa03041
]
LOAG_18113
Spliceosome [BR:
loa03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
LOAG_18113
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
INTS1_INTS2-bd
INTS1_RP2B-bd
INT1_R3
WHD_Storkhead
Imm30
SgrT
Motif
Other DBs
NCBI-GeneID:
9946334
NCBI-ProteinID:
XP_020305497
UniProt:
A0A1I7VP01
LinkDB
All DBs
AA seq
1762 aa
AA seq
DB search
MSKQGHKTRANLPAGGFLAIGRDAPSTSDTSRVKPQVHKRELPQLSSGVLKKPRLDFSGK
ILSSTQSTSSVKRTEVDDSKWRSFCAEVQIEPKQLLASLELAKEKQKPQKAARLICAAIR
EMIDHRKETGSWAEEPIICSALMLFIKMNTSFLLPQEELIEVLCSLLSMNLPTSSPGSAM
APLLLYKLLMETTNWNWRLVETFIDDSLHERQWADRPSVDGLVVNIITAFGTRIPQESMY
IACDLTYPERYRTVAEINRFAKVTDKEQKIDAFVVQMRDICERKGESAPRNLLKTMCTCA
GNGNIRLLAARKMDSWLLNGKLQRYAMELLLWIASNIGRSEFTEEDSETLSALLKLRALK
SKQINMLFNVALREILSNDKEMICAVAKLLLSNEFSANRFPYNMTMIHSLFSFDNRSASK
VIAREIAQMLAAKEEYLRISRAFLREFVRSLLRMDFDFALFTSHLFNAATEDFTAFATPA
FFFKSLIDFCVMLPFLAITPTIREASQHRRSANGSLAQNHIDALQKFYADLRNFFEICTC
FFRKHYEFCTDNRLFVYSYYRVLYLAPAEYYASVDQWPIEADVMQYMRVISDVPISEQLL
CTILEAGSDPSVPIDAADTVDVIENLTKRASLSSTLTGGSMVPVSSCTLLENLFKITEYR
PPPTFNIQDEDLPTLAVRTLYWKAWLISLIWTSQNIDTLVKEVYYKYPNLKLIIQIVLTW
DYSFPPMATMGDRIYADKLVEDDEKAAYEEKMTIKTLEARLAGMEVSDSDSKLLNKLCSL
DINGVCRRLPDNIMRDLEKLNEDLDLSRLLSECRDPDLLADIVRSQGSSKALPSIINLVE
SNSNAIAHLPLECICELFLHYIASSSSCYSSMTPNMERLDAMRQRLHNAITSPTATRASV
LETLEYLAVHLAAHSASERCAAAHSLALLLDHETNTQVLPITANAAPAGNLHKVAYFNEL
KHRICALLSQACSVETDLNRLSDYLTFLFEYADSKNLHLVAHYISNMVERLKDGTEADII
RINAISFYERYFKEVEQNEAEWTEELEALLPANVKKVTVCIEKPDMKICSLTMISTAVSG
MLQLLCSQWKKKDKLATRVLMDLWFPASGRRPKVLNADGVELLPTWLKLKMLRTEDDRII
RVAMDDMQVRDALKFVQSFALTSYSCTKLLAILDADETPLEGDLLEEAQRASMFVRSYKL
RNAKGGEKFLKRVAEAKNLQECVKKEVDESDIGIELNSTATVFDTDDVDVKRLTFDHMNV
KEVISCIEQAIQEGSEPEKWSSVIFELSNNLECSRAVISLLKAKPTILSVAAVAVPLLIS
LVISRNKDASLISDFDSLFNSVINKSDLHIPESVRRILYSRGGEYAIETESPCSPNYDTY
DPESILMRLANSVGMDDMQSRLMERFLDTCPEILPHKDDGDLGSKSHTILEILFSSKAPT
LQYIISLLPTACSSATLSKIIEYLLESYRSQFTGISVIRTVISAFHASKTYVLSTEQCSV
FIQYVLAEMECHPNDVITLLMKFLENNANIRRDLTQGMIAEVSRVLSSPDNIQRKRFAQQ
IADAFVKRFPDARLKNDAIVIDSYRSVCIQDRTVHNAIVELFSAAATPACSIDHKISTLA
QITRSQPCVVLRHLPLLSACLASVAQLPARQLRTNSYQSLLLYIPKLLLDLAPQSFEEAD
RLQSILQTFFTLFENVGCGRTWVPLAQVLQNVCVAYLELNAKSAKSYFLTQIEAVKQLCL
CLKSPSSKVLIDTIMCLSRVEE
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacaaggacataaaacaagagcaaatttaccagctggtggatttctggcaatt
ggtcgtgatgctccgtcaacttctgatacgagtcgcgtgaaacctcaagttcataaacga
gaattaccacagttatcgagtggtgttttgaagaagcctcgtcttgacttttctgggaaa
attctttccagtactcaatcaacgagttccgtcaagcgtaccgaagtcgatgattcaaaa
tggcgtagtttttgtgctgaagtacaaatagaacctaagcaattactagcatcgttggaa
ttagcaaaggaaaaacaaaaaccacaaaaagccgctcggttgatatgtgcagcaatacgg
gaaatgattgatcatcgtaaagaaaccggtagttgggctgaagagccaattatttgttca
gcacttatgcttttcataaaaatgaatacttcatttttattaccgcaggaagaattgatc
gaagtactttgttcactgttgtcaatgaatttacctacctcttcgcccggttcagcaatg
gctcctttactgttatacaaacttttgatggaaacgaccaactggaattggcgattggtt
gaaacttttattgatgacagtttacatgaaagacagtgggctgatcgaccatcagtagat
ggtttggttgtgaatatcataacagcttttggtactcggatcccacaggaatcgatgtat
atagcatgcgatttgacttatccagaacgttatcggactgtggccgaaattaatcgattt
gcgaaagtgactgacaaagagcagaaaattgacgcatttgtggtgcaaatgagagatata
tgtgaacggaagggtgaaagtgcaccaagaaatttgttgaagacgatgtgtacatgtgca
ggaaatggaaatattcgattactggctgcacgaaaaatggattcatggttgctgaatgga
aagcttcaaagatatgccatggaattacttctgtggattgcaagtaatataggccgaagt
gagtttaccgaagaagatagtgaaacgttaagcgctttgttaaaattgcgggcattgaaa
agtaaacaaatcaatatgttattcaatgttgccttaagagaaatattgagcaatgacaaa
gagatgatttgtgcagtagcaaaattattattgtcaaatgaattctcggcgaatcgtttt
ccttacaatatgacaatgatacattcgttattttcgtttgataaccgttcggcatccaaa
gttatagcgcgagaaattgcccagatgctcgcagctaaagaagaatatttgcgtatatcg
agagcattcctccgggaatttgttcgatcgttgttacgaatggatttcgattttgctctt
ttcacttcccatttattcaacgccgcaactgaggatttcacagcctttgctacccctgct
ttcttttttaaatcgttgattgacttctgtgtgatgctaccatttttggcaataacacct
accattagagaagcatctcaacatcgacgtagtgctaatggcagtttggctcaaaatcat
attgatgctttgcagaagttttatgcagatttaagaaattttttcgaaatctgtacttgt
tttttccgcaaacattatgaattctgcactgataatcggttatttgtgtattcgtactat
cgagtcctttatttggctccggctgaatattacgctagtgtcgatcagtggccaattgaa
gcggatgtaatgcaatatatgcgtgttatttccgatgttcctatcagtgaacagttacta
tgcactatattagaggctgggtctgatccctcagttccaattgatgctgcagatacggta
gatgttattgagaatctcacaaaacgagcttctttgtcttccacattaacaggtggtagt
atggttccagtcagcagttgtactctattggaaaatctattcaaaataacggaatacaga
ccaccgccaactttcaatattcaggatgaagatcttccaacgttggcggttagaacgctg
tattggaaagcatggctcatttcattgatatggacatcacaaaacatagatacattggtt
aaggaggtgtactacaagtatccaaatttaaaacttatcatacaaattgttttgacatgg
gattattcatttccaccgatggcaactatgggtgatcgaatatatgcagacaaactagtt
gaagatgatgaaaaggctgcttatgaggaaaaaatgacaatcaaaactttggaagctcga
ctggccggaatggaagtgagtgattcagattcaaagcttctgaacaaactatgcagcctg
gatataaatggcgtctgccgacggcttccggataacatcatgcgtgatttggaaaaactc
aatgaagatttagatttgtcacgacttttgagcgaatgtagggatcctgatttgctagca
gatattgtcagatctcagggtagctcgaaagctttaccatctataataaatttggtggaa
tcaaactcaaacgctatagctcatttacctctcgaatgtatttgtgagctgtttctgcac
tatatagcttcctcttcgtcatgttatagtagtatgacaccaaacatggaaaggttggat
gcgatgcgtcagcgtttacataatgccataacgagtcctactgctaccagagcttcagta
ttggaaacactggaatatctggcagtacatcttgctgctcactcggcgtccgaacgttgt
gctgccgctcattcactggcattacttcttgatcatgagacaaatacacaagtattgcca
ataacagcaaatgcagcaccagccggaaatcttcataaagtcgcatattttaatgaatta
aagcatcgaatttgtgctcttttatcacaagcctgctcagtggaaaccgacttaaatcgt
ttatcggattacttgacatttcttttcgaatatgcagactcgaaaaatttacatttggtc
gcacattacatttcaaatatggttgagcggctaaaagatggcacagaagcagatatcatt
cgaataaatgccataagcttctatgaaagatatttcaaggaagttgagcaaaatgaagct
gaatggacagaagaattagaagcacttttaccagcaaatgttaaaaaagtgacagtttgc
attgagaaaccagatatgaagatatgctcattaacgatgatttcaacagctgttagtggg
atgctgcaattattgtgcagtcagtggaagaagaaggataagttagctacacgagttctc
atggatctttggtttccagcatcaggaagacgaccaaaggttctcaatgcggatggtgtt
gaacttttacccacttggttgaaacttaaaatgcttcgcactgaagatgatcgaatcatt
cgcgttgcaatggatgatatgcaagttagagatgctttgaaatttgttcagtcatttgca
ctgacatcatacagttgcacaaagctgctagcaattctagatgctgatgaaacaccgttg
gaaggtgacttgctagaagaagctcaaagagcatcaatgtttgtccgaagttataaattg
cgaaacgccaaaggtggtgaaaagtttcttaaacgtgtagctgaagcaaaaaatctacaa
gaatgtgtaaaaaaggaagttgatgaaagtgatatcggtatagaattgaattcaacggca
acagtattcgatacggatgatgttgatgtgaaacgattaacatttgatcatatgaatgtc
aaggaagtaatcagttgtattgaacaggcaatccaagaaggcagcgaaccggaaaaatgg
tcgtcggtaatttttgaactgtcaaacaacttggaatgttctcgagctgttatttctttg
ttgaaagctaagccgactatattatccgttgcagcagttgcggtaccgttactgatctcg
ctagttatttcgaggaataaagatgcttcattaatcagcgattttgattccttgttcaac
agtgtgatcaacaaatctgatcttcatattccagaatctgtacgcaggattttgtatagt
cgtggtggagaatatgcgatcgaaacggaaagtccatgctcgccaaattacgatacatat
gatccggaaagtatcctcatgcgtctagcaaattctgttggcatggatgatatgcaaagc
cgtttgatggaaagatttctggacacatgtccggaaatattacctcataaagatgatggt
gatcttggtagtaaatctcataccatactggaaatattattttcatccaaagcaccaacc
ttacaatatatcatttcgttgctgccgacagcgtgttcttcagccactttgagtaaaata
attgagtatctgcttgaatcatatcgatctcaatttacaggcatatcagttatacgaact
gttatcagtgctttccatgcttctaaaacatatgtactttcgactgagcaatgcagtgtt
ttcatccaatatgttttggctgaaatggaatgtcatccaaatgatgttataacgttgtta
atgaaatttctggaaaataatgcaaatattcggcgcgacttaacacaaggtatgatagct
gaagtttcccgtgttttatcttcgccagacaatattcaacggaaacgttttgcacagcag
atagctgatgcttttgtgaaacgttttccagatgctcgactaaaaaacgatgcaatagtg
atcgactcatatcgttccgtttgcatccaagatcggacagtccacaatgctattgtggaa
ttattttctgccgcagctacgcctgcatgttcaattgatcataagatcagtacattggct
caaattacgcgcagtcaaccatgtgtcgtattgaggcatttaccattgctgtccgcctgc
ttagcatcagttgcacaactcccagcccgacaactacgaacaaacagttaccagtcctta
ttactgtatattccaaaattattgttagatttggctcctcagtctttcgaagaagctgat
cgcttgcaatccattttgcagacatttttcactctttttgaaaatgttggatgtggacga
acatgggtaccgttggctcaagtgctacaaaatgtttgtgtcgcgtatttggaacttaat
gcaaagtcagcaaaatcgtatttcctaacgcaaatcgaagcagtcaagcagctttgttta
tgtttgaagtcgccttcctcgaaagtattgatcgacacgataatgtgtttgagcagagtc
gaggaataa
DBGET
integrated database retrieval system
